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The map label for this gene is phoD [H]

Identifier: 75908469

GI number: 75908469

Start: 2802629

End: 2804197

Strand: Direct

Name: phoD [H]

Synonym: Ava_2252

Alternate gene names: 75908469

Gene position: 2802629-2804197 (Clockwise)

Preceding gene: 75908468

Following gene: 75908470

Centisome position: 44.03

GC content: 45.51

Gene sequence:

>1569_bases
ATGGAATTAATAAATCGCAACTTCCTTGCAACCCATTGCAAACGCAGGAATTTTTTACTGGGTGCAGGACTAATCACAGG
GTTAGTAGTAGCCAGTCAATGGCATCCTGTGATGGCGCAAACAAGATTTTCTGGCTATCCATTTAGTCTAGGTGTTGCCT
CTGGAGATTCCTTACCTGATAGCGTGGTGTTATGGACAAGACTAGCACCAGATCCAGTCAACGGCGGTGGTATGTCACCA
GTGAATGTTCCTGTGCAGTGGCAAATCGCACGGGATGAAAATATGACACAGGTTGTACAAAAAGGAACAGTCTTAGCAAC
ACCCGAACTAGCTCACTCAGTACACGTTGATGTCCGTGGGCTAGAGCCTGATCGTTGGTACTGGTATCAATTCAAAGTAG
GTAATGAAGTCAGCCCCAAAGGACGTACACGTACAGCCGCATCACCTCATAGCTCTATTCAAAAATTTAATTTCGCCTTT
GCTTCTTGCCAAGATTGGCAGAATGGCTTTTACACAGCCTACAAACACATGGCTGAAGAAGACCTTGACTTAGTTGTGCA
TCTAGGTGACTACATCTATGAGTATGGGCCTCGCTCTGGTGCGCCACGTCAGCATATCGGCCCAGAAATCGTTACTCTTA
GCGATTACCGAAACCGCTATGCTTTGTATAGAACTGACGTAAATTTACAAGCAGCTCATGCTAACTTCCCTTGGATTTTT
ACTTGGGATGACCATGAAGTAGATAACAACTATGCCAACTTCATTCCCGAAGATAACCAGAGTCGGCAAGCATTTGAGCG
CCGACGAGCCAATGCTTACCAAGCTTACTATGAGCATATGCCATTGCGCCTATCCTCCTTGCCCAAGCAATCTAGTATGC
TGCTATATCGACGGTTAACTTTTGGGGATTTAGCTGAGTTCAATGTCTTAGATACTCGCCAATACCGGACTGACCAACCT
TGTAATGATGGACTCAAGCCACTGTGTAACGCAGCTTTAGACGCAGCCGCCACCATGACAGGTGCAAGACAAGAAGGTTG
GTTACTCAGAGGACTAGACAAATCAAAAGCACGCTGGAATATAATTGCTCAACAAACAATGCTTGGTCAATTTGATTTTG
ATGCTCGTCCCGATTCCCAAGTCTTCAACGTTGACCAATGGGATGGTTATGTCGCGGCTCGTAATCGCCTCTTGAGTTTT
TTCGCACAGCGTAGACCCTCAAACCCAGTAGTAATTACTGGAGATATCCATTCCAGTTGGGTACATGATTTAAAAGCTGA
CTTTAATAATCCACTGTCAGCAACCGTAGGGACTGAGTTTGTGGGTACTTCCATTACTTCTAGCTTTCCTACAAATTCCA
TTGCACCAGTTAGAGCAGCTTTGAGCAACAACCCCCATACAAAATTCTTCGATGGTGCTTATCGCGGTTATGTTCGTTGC
CAACTAACTAGAGAACGTTGGCAAACTGATTACCGTGTGGTGTCCAGCATCCTTGAAGAGAATGCTTCTATTAGCACCCT
CGCTTCCTTTGTGGTAGAAAACGGGCAGCCAGGTGCAAAAACAGCGTGA

Upstream 100 bases:

>100_bases
GTCTTAAACCCTGCTTGATGATTTATTGATAAATTTCTCTTGCTTAGTTAGACAAACTTAAGTAGCTTGCCAATATCTCA
ACATCTTAGTAGGGGTAAAT

Downstream 100 bases:

>100_bases
TATGTAGGATTTTAGGAGAGGATTTAGCAATTGCTTTTTTCCTCTCTTTTTCTTTTAGCTAGAATATCTATCTCTTACGT
TACTGGTTAGTGATGTGATA

Product: alkaline phosphatase

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MELINRNFLATHCKRRNFLLGAGLITGLVVASQWHPVMAQTRFSGYPFSLGVASGDSLPDSVVLWTRLAPDPVNGGGMSP
VNVPVQWQIARDENMTQVVQKGTVLATPELAHSVHVDVRGLEPDRWYWYQFKVGNEVSPKGRTRTAASPHSSIQKFNFAF
ASCQDWQNGFYTAYKHMAEEDLDLVVHLGDYIYEYGPRSGAPRQHIGPEIVTLSDYRNRYALYRTDVNLQAAHANFPWIF
TWDDHEVDNNYANFIPEDNQSRQAFERRRANAYQAYYEHMPLRLSSLPKQSSMLLYRRLTFGDLAEFNVLDTRQYRTDQP
CNDGLKPLCNAALDAAATMTGARQEGWLLRGLDKSKARWNIIAQQTMLGQFDFDARPDSQVFNVDQWDGYVAARNRLLSF
FAQRRPSNPVVITGDIHSSWVHDLKADFNNPLSATVGTEFVGTSITSSFPTNSIAPVRAALSNNPHTKFFDGAYRGYVRC
QLTRERWQTDYRVVSSILEENASISTLASFVVENGQPGAKTA

Sequences:

>Translated_522_residues
MELINRNFLATHCKRRNFLLGAGLITGLVVASQWHPVMAQTRFSGYPFSLGVASGDSLPDSVVLWTRLAPDPVNGGGMSP
VNVPVQWQIARDENMTQVVQKGTVLATPELAHSVHVDVRGLEPDRWYWYQFKVGNEVSPKGRTRTAASPHSSIQKFNFAF
ASCQDWQNGFYTAYKHMAEEDLDLVVHLGDYIYEYGPRSGAPRQHIGPEIVTLSDYRNRYALYRTDVNLQAAHANFPWIF
TWDDHEVDNNYANFIPEDNQSRQAFERRRANAYQAYYEHMPLRLSSLPKQSSMLLYRRLTFGDLAEFNVLDTRQYRTDQP
CNDGLKPLCNAALDAAATMTGARQEGWLLRGLDKSKARWNIIAQQTMLGQFDFDARPDSQVFNVDQWDGYVAARNRLLSF
FAQRRPSNPVVITGDIHSSWVHDLKADFNNPLSATVGTEFVGTSITSSFPTNSIAPVRAALSNNPHTKFFDGAYRGYVRC
QLTRERWQTDYRVVSSILEENASISTLASFVVENGQPGAKTA
>Mature_522_residues
MELINRNFLATHCKRRNFLLGAGLITGLVVASQWHPVMAQTRFSGYPFSLGVASGDSLPDSVVLWTRLAPDPVNGGGMSP
VNVPVQWQIARDENMTQVVQKGTVLATPELAHSVHVDVRGLEPDRWYWYQFKVGNEVSPKGRTRTAASPHSSIQKFNFAF
ASCQDWQNGFYTAYKHMAEEDLDLVVHLGDYIYEYGPRSGAPRQHIGPEIVTLSDYRNRYALYRTDVNLQAAHANFPWIF
TWDDHEVDNNYANFIPEDNQSRQAFERRRANAYQAYYEHMPLRLSSLPKQSSMLLYRRLTFGDLAEFNVLDTRQYRTDQP
CNDGLKPLCNAALDAAATMTGARQEGWLLRGLDKSKARWNIIAQQTMLGQFDFDARPDSQVFNVDQWDGYVAARNRLLSF
FAQRRPSNPVVITGDIHSSWVHDLKADFNNPLSATVGTEFVGTSITSSFPTNSIAPVRAALSNNPHTKFFDGAYRGYVRC
QLTRERWQTDYRVVSSILEENASISTLASFVVENGQPGAKTA

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 58956; Mature: 58956

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELINRNFLATHCKRRNFLLGAGLITGLVVASQWHPVMAQTRFSGYPFSLGVASGDSLPD
CCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCC
SVVLWTRLAPDPVNGGGMSPVNVPVQWQIARDENMTQVVQKGTVLATPELAHSVHVDVRG
CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCEEECHHHHCEEEEEEEC
LEPDRWYWYQFKVGNEVSPKGRTRTAASPHSSIQKFNFAFASCQDWQNGFYTAYKHMAEE
CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
DLDLVVHLGDYIYEYGPRSGAPRQHIGPEIVTLSDYRNRYALYRTDVNLQAAHANFPWIF
CHHEEEEHHHHHHHCCCCCCCCHHHCCCCEEEECCCCCCEEEEEECCEEEEECCCCCEEE
TWDDHEVDNNYANFIPEDNQSRQAFERRRANAYQAYYEHMPLRLSSLPKQSSMLLYRRLT
EECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCC
FGDLAEFNVLDTRQYRTDQPCNDGLKPLCNAALDAAATMTGARQEGWLLRGLDKSKARWN
CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEE
IIAQQTMLGQFDFDARPDSQVFNVDQWDGYVAARNRLLSFFAQRRPSNPVVITGDIHSSW
EEEHHHHHCCCCCCCCCCCCEEECHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
VHDLKADFNNPLSATVGTEFVGTSITSSFPTNSIAPVRAALSNNPHTKFFDGAYRGYVRC
HHHHHHHCCCCCCHHCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCEEEE
QLTRERWQTDYRVVSSILEENASISTLASFVVENGQPGAKTA
EEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MELINRNFLATHCKRRNFLLGAGLITGLVVASQWHPVMAQTRFSGYPFSLGVASGDSLPD
CCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCC
SVVLWTRLAPDPVNGGGMSPVNVPVQWQIARDENMTQVVQKGTVLATPELAHSVHVDVRG
CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCEEECHHHHCEEEEEEEC
LEPDRWYWYQFKVGNEVSPKGRTRTAASPHSSIQKFNFAFASCQDWQNGFYTAYKHMAEE
CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
DLDLVVHLGDYIYEYGPRSGAPRQHIGPEIVTLSDYRNRYALYRTDVNLQAAHANFPWIF
CHHEEEEHHHHHHHCCCCCCCCHHHCCCCEEEECCCCCCEEEEEECCEEEEECCCCCEEE
TWDDHEVDNNYANFIPEDNQSRQAFERRRANAYQAYYEHMPLRLSSLPKQSSMLLYRRLT
EECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCC
FGDLAEFNVLDTRQYRTDQPCNDGLKPLCNAALDAAATMTGARQEGWLLRGLDKSKARWN
CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEE
IIAQQTMLGQFDFDARPDSQVFNVDQWDGYVAARNRLLSFFAQRRPSNPVVITGDIHSSW
EEEHHHHHCCCCCCCCCCCCEEECHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
VHDLKADFNNPLSATVGTEFVGTSITSSFPTNSIAPVRAALSNNPHTKFFDGAYRGYVRC
HHHHHHHCCCCCCHHCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCEEEE
QLTRERWQTDYRVVSSILEENASISTLASFVVENGQPGAKTA
EEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]