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The map label for this gene is recR [H]

Identifier: 75908470

GI number: 75908470

Start: 2804453

End: 2805010

Strand: Direct

Name: recR [H]

Synonym: Ava_2253

Alternate gene names: 75908470

Gene position: 2804453-2805010 (Clockwise)

Preceding gene: 75908469

Following gene: 75908472

Centisome position: 44.06

GC content: 44.98

Gene sequence:

>558_bases
TTGCAACGCCTCCCTGGAGTTGGTCCCAAAACAGCCCAGCGCCTAGCCTTGCATATTTTGAAGCGACCAGAATCTGAAGT
AGAAGCTTTAGCACAAGCTCTAGTTGAGGCGAAAAAGCAGATAGGCTTGTGTTCTGTCTGTTTTCACTTATCTTCTGAAC
CAGTTTGTGAAATCTGCCGCAATCCTAACCGTGAAAATAATACTATCTGCGTAGTAGCAGATTCCCGCGATGTGATTGCC
CTAGAGAAAACCCGCGAATTCAAAGGTAAGTATCATGTCCTGGGTGGGGTGATTTCGCCGATGGATGGAATTGGCCCAGA
ACAGTTGACCATAACTCCTTTGTTGCGGAGGGTCAGTCAACAGCAACCAAAAGAAGTGATTTTAGCAATTAGTCCCAGCG
TCGAAGGGGAAACCACAACATTGTATGTTGGTCAACTATTGAAACCATTTACTAAAGTGACAAGAATTGCCTTTGGTTTG
CCCGTAGGGGGAGATTTAGAATACGCTGATGAGATTACACTGGCAAGAGCTTTAGAAGGACGCAGAGAATTAGATTAA

Upstream 100 bases:

>100_bases
CATCAAAAATTGTTTAAAAATGCCATCATAGTTAAAGTAAAAGCATTCTGGAGACAAAACCACGGTTTACGCACGTCCTT
TAGCACGGTTAATTGAGCAA

Downstream 100 bases:

>100_bases
CTATGAACTAGATTAACTATAGATAAAACAAAAAGGCGCTCTCTAATAACGAGAGCGCCTTTTCGTAAAAATAGAACCTG
GCACCGAGCGATTGTGGCAT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHLSSEPVCEICRNPNRENNTICVVADSRDVIA
LEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQQQPKEVILAISPSVEGETTTLYVGQLLKPFTKVTRIAFGL
PVGGDLEYADEITLARALEGRRELD

Sequences:

>Translated_185_residues
MQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHLSSEPVCEICRNPNRENNTICVVADSRDVIA
LEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQQQPKEVILAISPSVEGETTTLYVGQLLKPFTKVTRIAFGL
PVGGDLEYADEITLARALEGRRELD
>Mature_185_residues
MQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHLSSEPVCEICRNPNRENNTICVVADSRDVIA
LEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQQQPKEVILAISPSVEGETTTLYVGQLLKPFTKVTRIAFGL
PVGGDLEYADEITLARALEGRRELD

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=183, Percent_Identity=46.448087431694, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF00633 HHH; PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 20311; Mature: 20311

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHLSSEPVCEICR
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHC
NPNRENNTICVVADSRDVIALEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQ
CCCCCCCEEEEEECCCCEEEEHHHHHHCCCEEECCCHHCCCCCCCCCCEEHHHHHHHHHH
QQPKEVILAISPSVEGETTTLYVGQLLKPFTKVTRIAFGLPVGGDLEYADEITLARALEG
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
RRELD
HHCCC
>Mature Secondary Structure
MQRLPGVGPKTAQRLALHILKRPESEVEALAQALVEAKKQIGLCSVCFHLSSEPVCEICR
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHC
NPNRENNTICVVADSRDVIALEKTREFKGKYHVLGGVISPMDGIGPEQLTITPLLRRVSQ
CCCCCCCEEEEEECCCCEEEEHHHHHHCCCEEECCCHHCCCCCCCCCCEEHHHHHHHHHH
QQPKEVILAISPSVEGETTTLYVGQLLKPFTKVTRIAFGLPVGGDLEYADEITLARALEG
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
RRELD
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]