| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is yhaA [H]
Identifier: 75908435
GI number: 75908435
Start: 2754855
End: 2756072
Strand: Direct
Name: yhaA [H]
Synonym: Ava_2218
Alternate gene names: 75908435
Gene position: 2754855-2756072 (Clockwise)
Preceding gene: 75908432
Following gene: 75908440
Centisome position: 43.28
GC content: 45.16
Gene sequence:
>1218_bases ATGGTTTCCACCTTTCCCAATTCCGCATCTGTTGACTTATCCCGTGTGCGGCTAGCAATCCGTTCATTGCAACCCCAATT GGTTGAATGGCGACGACGACTGCATCAAAAACCAGAGCTAGCTTTTCAAGAAAAAATCACGGCTGCGTTTGTCTCAAGTA AGTTACAAGCATGGGGAATTGAGCACCAAACAAGTATTGCTCAAACTGGAATAGTGGCTACCATTAAAGGCGAAAAACCC AGCACTCAAGTCTTGGCAATTCGAGCAGATATGGATGCTTTGCCAATCCAAGAACTTAACGAAGTGCCTTACTGCTCACA GCATAATGGTGTGATGCACGCCTGTGGACATGACGGACATACAGCGATCGCACTTGGCACAGCTTACTATTTACAACAGC ATCGTCAAAATTTTGCTGGGACTGTAAAAATCATCTTCCAGCCGGCTGAGGAAGGGCCAGGGGGAGCAAAACCCATGATT GAGGCTGGAGTACTGAAAAACCCTGATGTTGATGCAATTATCGGGTTGCACCTATGGAATAACTTACCTTTGGGAACAGT AGGTGTCCGCAGTGGCCCATTGATGGCGGCGGTAGAATTATTTGACTGTACAATTTTCGGCAAAGGTGGACATGGTGCAA TACCCCATCAAACTGTAGATTCTGTAGTAGTTGCTGCCCAAATTGTCACTGCTCTACAAACCATCGTCGCGCGTAATGTC AACCCCATCGATTCCGCAGTGGTGACTGTCGGCGCACTCCATGGAGGGACAACCCATAATGTTATTGCCGATACAGCCAC TATGAAAGGAACTGTCAGGTATTTTAACCCTGCTTTCCAAGGCTTTTTCCCACAAAGAATTGAGCAAGTTATTGCTGGCA TTTGTCAAAGTCATGGCGCAAAATATGACTTTAAATATACTGAATTATATCCCCCAGTCATTAATGATCAGGCGATCGCT CAATTAGTGCGTTCTGTAGCAGCAGAAGTGATCGAAACTCCCATTGGTATCGTGCCAGAATGTCAAACTATGGGCGGTGA AGATATGTCTTTCTTTCTACAAGAAGTTTCAGGTTGTTATTTCTTCCTTGGTTCTGCTAACCCAGACAAAGATTTAGCCT ATCCCCATCATCACCCCCGCTTCGACTTTGATGAAACTGCCCTAGCAATGGGGGTAGAGATATTTGTGCGGTGTGTAGAG AAATTTTTTAATGAATAA
Upstream 100 bases:
>100_bases GGTCAGTGGTCAGTATATCCTTATCCGTCTGCTTCCCTGCTCATAACCATGAGATAACGATAGACTGGGAAAATCACCCA CCTTATCTACCTAAGCCGTA
Downstream 100 bases:
>100_bases AAACTCCACCCACAAGGGGATAGAGTTTTGTCAGTAGTCAGTGGGAAAGATATGTAAAAACCACGCCAGATGAGGGTTGG GGTATTAGACCAGATCCTTT
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MVSTFPNSASVDLSRVRLAIRSLQPQLVEWRRRLHQKPELAFQEKITAAFVSSKLQAWGIEHQTSIAQTGIVATIKGEKP STQVLAIRADMDALPIQELNEVPYCSQHNGVMHACGHDGHTAIALGTAYYLQQHRQNFAGTVKIIFQPAEEGPGGAKPMI EAGVLKNPDVDAIIGLHLWNNLPLGTVGVRSGPLMAAVELFDCTIFGKGGHGAIPHQTVDSVVVAAQIVTALQTIVARNV NPIDSAVVTVGALHGGTTHNVIADTATMKGTVRYFNPAFQGFFPQRIEQVIAGICQSHGAKYDFKYTELYPPVINDQAIA QLVRSVAAEVIETPIGIVPECQTMGGEDMSFFLQEVSGCYFFLGSANPDKDLAYPHHHPRFDFDETALAMGVEIFVRCVE KFFNE
Sequences:
>Translated_405_residues MVSTFPNSASVDLSRVRLAIRSLQPQLVEWRRRLHQKPELAFQEKITAAFVSSKLQAWGIEHQTSIAQTGIVATIKGEKP STQVLAIRADMDALPIQELNEVPYCSQHNGVMHACGHDGHTAIALGTAYYLQQHRQNFAGTVKIIFQPAEEGPGGAKPMI EAGVLKNPDVDAIIGLHLWNNLPLGTVGVRSGPLMAAVELFDCTIFGKGGHGAIPHQTVDSVVVAAQIVTALQTIVARNV NPIDSAVVTVGALHGGTTHNVIADTATMKGTVRYFNPAFQGFFPQRIEQVIAGICQSHGAKYDFKYTELYPPVINDQAIA QLVRSVAAEVIETPIGIVPECQTMGGEDMSFFLQEVSGCYFFLGSANPDKDLAYPHHHPRFDFDETALAMGVEIFVRCVE KFFNE >Mature_405_residues MVSTFPNSASVDLSRVRLAIRSLQPQLVEWRRRLHQKPELAFQEKITAAFVSSKLQAWGIEHQTSIAQTGIVATIKGEKP STQVLAIRADMDALPIQELNEVPYCSQHNGVMHACGHDGHTAIALGTAYYLQQHRQNFAGTVKIIFQPAEEGPGGAKPMI EAGVLKNPDVDAIIGLHLWNNLPLGTVGVRSGPLMAAVELFDCTIFGKGGHGAIPHQTVDSVVVAAQIVTALQTIVARNV NPIDSAVVTVGALHGGTTHNVIADTATMKGTVRYFNPAFQGFFPQRIEQVIAGICQSHGAKYDFKYTELYPPVINDQAIA QLVRSVAAEVIETPIGIVPECQTMGGEDMSFFLQEVSGCYFFLGSANPDKDLAYPHHHPRFDFDETALAMGVEIFVRCVE KFFNE
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=435, Percent_Identity=30.8045977011494, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 44069; Mature: 44069
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTFPNSASVDLSRVRLAIRSLQPQLVEWRRRLHQKPELAFQEKITAAFVSSKLQAWGI CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC EHQTSIAQTGIVATIKGEKPSTQVLAIRADMDALPIQELNEVPYCSQHNGVMHACGHDGH CHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCEEEECCCCCC TAIALGTAYYLQQHRQNFAGTVKIIFQPAEEGPGGAKPMIEAGVLKNPDVDAIIGLHLWN EEEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHEEEEHHHC NLPLGTVGVRSGPLMAAVELFDCTIFGKGGHGAIPHQTVDSVVVAAQIVTALQTIVARNV CCCCCCCCCCCCCHHHHEEEHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC NPIDSAVVTVGALHGGTTHNVIADTATMKGTVRYFNPAFQGFFPQRIEQVIAGICQSHGA CCHHHHHHHHHHCCCCCCCCEEECCHHHCCCCEECCHHHHCCCHHHHHHHHHHHHHHCCC KYDFKYTELYPPVINDQAIAQLVRSVAAEVIETPIGIVPECQTMGGEDMSFFLQEVSGCY CEEEEEHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCCEE FFLGSANPDKDLAYPHHHPRFDFDETALAMGVEIFVRCVEKFFNE EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSTFPNSASVDLSRVRLAIRSLQPQLVEWRRRLHQKPELAFQEKITAAFVSSKLQAWGI CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC EHQTSIAQTGIVATIKGEKPSTQVLAIRADMDALPIQELNEVPYCSQHNGVMHACGHDGH CHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCEEEECCCCCC TAIALGTAYYLQQHRQNFAGTVKIIFQPAEEGPGGAKPMIEAGVLKNPDVDAIIGLHLWN EEEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHEEEEHHHC NLPLGTVGVRSGPLMAAVELFDCTIFGKGGHGAIPHQTVDSVVVAAQIVTALQTIVARNV CCCCCCCCCCCCCHHHHEEEHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC NPIDSAVVTVGALHGGTTHNVIADTATMKGTVRYFNPAFQGFFPQRIEQVIAGICQSHGA CCHHHHHHHHHHCCCCCCCCEEECCHHHCCCCEECCHHHHCCCHHHHHHHHHHHHHHCCC KYDFKYTELYPPVINDQAIAQLVRSVAAEVIETPIGIVPECQTMGGEDMSFFLQEVSGCY CEEEEEHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCCEE FFLGSANPDKDLAYPHHHPRFDFDETALAMGVEIFVRCVEKFFNE EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]