| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908370
Identifier: 75908370
GI number: 75908370
Start: 2662440
End: 2663591
Strand: Direct
Name: 75908370
Synonym: Ava_2151
Alternate gene names: NA
Gene position: 2662440-2663591 (Clockwise)
Preceding gene: 75908369
Following gene: 75908371
Centisome position: 41.82
GC content: 37.76
Gene sequence:
>1152_bases ATGATGAAAATAGTAGTAGCCCACAGCAACGACCCAGATTCTCTATCAGCAGTTAAAGAGATTATTCAGCAATCAACAGA TTCTCTTCAAGGAAATAATCCTCAAGCGGGAATTTTATTTGCAGCTATTGATTTTGATCACTCCCTAATTCTGGAAAATA TTAATCAGGCTTTTCCGGGTATTGAGTTGATTGGTGGAACTACAGATGGGGAAATTTCTTCACTGTTAGAATTTCAGCAA GACTCAATAACTTTAATGCTATTCTGCTCCGACGAAATTGAAATTTTTGCAGGTGTGGGATATCAGGTTTCACACAATCC AATTACGGCGACTCAAGAAGCTGTACAAAAAGCCAAAGCCAAAAGCACAACCGAGCCTCAGTTATGTTTAACCCATCCAG AAAGCCTTACAACTAGCGGTGTGTCTATCTTAGATGGCTTAAAATTGGCTTTAGGAGAAAAGTTTCCCATTTTCGGTGGT TTAGCAGCTGATCAGTCAGTTTATCAAAACACGCACCAATTCTTTAAAACAGAAGTCTTGAGTGATGCTGTGCCAATTTT GCTCTTTTGTGGTCAAGTTTTATTTTCCCACGGTGTGGCTAGTGGTTGGCTCCCCATTGGTAAAACTAGCCAAGTTACCA AAGTAGATAAAAATATCGTCTATGAGATTGACGGTAAACCAGCTTTAGAATTTTATCGACATTATTTAGGTCAGCTTCCG CCGTCAATGGAATATCCTTTAGCCGTGTTTACTCATGATAAAACGAGTTTTTATCTGAGAGCGCCGATCGCCTATGATGA ACAATTAGGTAGTGTCACTTTCTTTGCTGATATTCCTGAACAAGCGAGTATTAACATGGCTGAAGCAGGTAAAAGCGATA TTTTAGCTGCTTCTCAAGCATCATTTATGACAGCGTTCAAGAATTACCCAGGAACGGAACCAGCAGGTGTTCTGTTTTTC TCTTGTGTAGCTCGAAGACAATTACTAGGTACACAAGCTCAACAAGAATATCTAAATACTAAAAATATTTCTAATAAATA TTTACCATCTTGTGGTTTTTATTGTAATGGAGAAATTTCCCCTATAAAACCAACAGGTGAAACACATTTTCATAATGAAA CTTTTGTCACTTTAATTTTAGGAACTCATTAA
Upstream 100 bases:
>100_bases TTTAGTATAAATTTGTCGCTAATTTGTGTGATTTGCAAATTTATTCATAAAACTAGGGAACTATATTGCTGTAGGGATTA ATGTTTTACAGAGTAAAACG
Downstream 100 bases:
>100_bases TAATTTAAGGATTGTATGAATTGTGAACAAGAAATCCAGAGGCTGGAAAAAGCTAATAGAATCCTTCAGAAAAAATTAAT TCGTTCAGAGGTTGATAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Diguanylate Cyclase; FIST Domain-Containing Protein; Phosphatase; GGDEF Domain-Containing Protein; Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Diguanylate Cyclase Domain Protein; FIST C Domain Protein; Protein Containing FIST C Domain; Signal Transduction Histidine Kinase
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MMKIVVAHSNDPDSLSAVKEIIQQSTDSLQGNNPQAGILFAAIDFDHSLILENINQAFPGIELIGGTTDGEISSLLEFQQ DSITLMLFCSDEIEIFAGVGYQVSHNPITATQEAVQKAKAKSTTEPQLCLTHPESLTTSGVSILDGLKLALGEKFPIFGG LAADQSVYQNTHQFFKTEVLSDAVPILLFCGQVLFSHGVASGWLPIGKTSQVTKVDKNIVYEIDGKPALEFYRHYLGQLP PSMEYPLAVFTHDKTSFYLRAPIAYDEQLGSVTFFADIPEQASINMAEAGKSDILAASQASFMTAFKNYPGTEPAGVLFF SCVARRQLLGTQAQQEYLNTKNISNKYLPSCGFYCNGEISPIKPTGETHFHNETFVTLILGTH
Sequences:
>Translated_383_residues MMKIVVAHSNDPDSLSAVKEIIQQSTDSLQGNNPQAGILFAAIDFDHSLILENINQAFPGIELIGGTTDGEISSLLEFQQ DSITLMLFCSDEIEIFAGVGYQVSHNPITATQEAVQKAKAKSTTEPQLCLTHPESLTTSGVSILDGLKLALGEKFPIFGG LAADQSVYQNTHQFFKTEVLSDAVPILLFCGQVLFSHGVASGWLPIGKTSQVTKVDKNIVYEIDGKPALEFYRHYLGQLP PSMEYPLAVFTHDKTSFYLRAPIAYDEQLGSVTFFADIPEQASINMAEAGKSDILAASQASFMTAFKNYPGTEPAGVLFF SCVARRQLLGTQAQQEYLNTKNISNKYLPSCGFYCNGEISPIKPTGETHFHNETFVTLILGTH >Mature_383_residues MMKIVVAHSNDPDSLSAVKEIIQQSTDSLQGNNPQAGILFAAIDFDHSLILENINQAFPGIELIGGTTDGEISSLLEFQQ DSITLMLFCSDEIEIFAGVGYQVSHNPITATQEAVQKAKAKSTTEPQLCLTHPESLTTSGVSILDGLKLALGEKFPIFGG LAADQSVYQNTHQFFKTEVLSDAVPILLFCGQVLFSHGVASGWLPIGKTSQVTKVDKNIVYEIDGKPALEFYRHYLGQLP PSMEYPLAVFTHDKTSFYLRAPIAYDEQLGSVTFFADIPEQASINMAEAGKSDILAASQASFMTAFKNYPGTEPAGVLFF SCVARRQLLGTQAQQEYLNTKNISNKYLPSCGFYCNGEISPIKPTGETHFHNETFVTLILGTH
Specific function: Unknown
COG id: COG3287
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41765; Mature: 41765
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKIVVAHSNDPDSLSAVKEIIQQSTDSLQGNNPQAGILFAAIDFDHSLILENINQAFPG CEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCC IELIGGTTDGEISSLLEFQQDSITLMLFCSDEIEIFAGVGYQVSHNPITATQEAVQKAKA EEEECCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHH KSTTEPQLCLTHPESLTTSGVSILDGLKLALGEKFPIFGGLAADQSVYQNTHQFFKTEVL CCCCCCCEEEECCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SDAVPILLFCGQVLFSHGVASGWLPIGKTSQVTKVDKNIVYEIDGKPALEFYRHYLGQLP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHCCC PSMEYPLAVFTHDKTSFYLRAPIAYDEQLGSVTFFADIPEQASINMAEAGKSDILAASQA CCCCCCEEEEEECCCEEEEECCCCHHHCCCCEEEEECCCCCCCCCHHHCCCCHHHHHHHH SFMTAFKNYPGTEPAGVLFFSCVARRQLLGTQAQQEYLNTKNISNKYLPSCGFYCNGEIS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCCC PIKPTGETHFHNETFVTLILGTH CCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MMKIVVAHSNDPDSLSAVKEIIQQSTDSLQGNNPQAGILFAAIDFDHSLILENINQAFPG CEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCC IELIGGTTDGEISSLLEFQQDSITLMLFCSDEIEIFAGVGYQVSHNPITATQEAVQKAKA EEEECCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHH KSTTEPQLCLTHPESLTTSGVSILDGLKLALGEKFPIFGGLAADQSVYQNTHQFFKTEVL CCCCCCCEEEECCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SDAVPILLFCGQVLFSHGVASGWLPIGKTSQVTKVDKNIVYEIDGKPALEFYRHYLGQLP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHCCC PSMEYPLAVFTHDKTSFYLRAPIAYDEQLGSVTFFADIPEQASINMAEAGKSDILAASQA CCCCCCEEEEEECCCEEEEECCCCHHHCCCCEEEEECCCCCCCCCHHHCCCCHHHHHHHH SFMTAFKNYPGTEPAGVLFFSCVARRQLLGTQAQQEYLNTKNISNKYLPSCGFYCNGEIS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCCC PIKPTGETHFHNETFVTLILGTH CCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA