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The map label for this gene is ynfJ [C]

Identifier: 75908311

GI number: 75908311

Start: 2581207

End: 2582511

Strand: Direct

Name: ynfJ [C]

Synonym: Ava_2090

Alternate gene names: 75908311

Gene position: 2581207-2582511 (Clockwise)

Preceding gene: 75908309

Following gene: 75908312

Centisome position: 40.55

GC content: 43.07

Gene sequence:

>1305_bases
GTGCTACCAAATAAGCGTACTCCCACAAACCAAGCTCAACGCTGGAAGTTTTTACAACTTTTTGGTCTGGTAAGACGTAA
TCCTCTACTAATTTCACGATGGGTTTTACGCTGGGTAATGGTAGGGACTGTTTGTGGTCTATTTGCTGGTTTGTACTGGA
ATGTTTTAGAACTGATGACTCACCAACTGGAAAGGTTTGAGAGTGTGAGTCTGCTAATAGTTATGCCAATAGCTGGATTA
ATTGTTGGCTTGGTAATCCACTTTTTAGGCAATCCTGGAGAAATTGCTGTCATTGTTGATAATATCCATTTTCGTGGCGG
GCGCTTGGATATACGAAAAAATCCAGCGATGATTCTGGCCTCTTTGGTGAGTATAGCTGGTGGGGGCAGTGCAGGCCCAG
AAGCCCCATTAGTACAAGTTACAGGTTCTTTTGGTACATGGGTAGGCGATCGCCTCGGTCTCCAGGGCGAAGATATGAGA
TCCATGAGTCTAGCAGCAATGGCTGCTGGCTTTACTGCCTTGTTTGGCGCACCATTAGGTGGAGCGATGTTTGCCCTAGA
AATCCTTCACCATCAGCATATCATCGAATACTATGAAGCTTTAATGCCAGCTATTGTTTCTAGTTGCGCGAGTTACCTAG
TATTTGCCTTAATCACTCATTTGGGAATTGCCCCCACGTGGCATTTTCCCGAATACAATTTAGAGAACATGGATGATTTT
GCTTGGGCTATCCTATTCGGAATCATCGGCGCTGTTGCAGGCTGGATTTTTATGACCATTTTTCGCACCTGTGACAGATT
ATGGGCGATGCTTCCCGTCCCTGTCTATATACGCACCACATTAGCAGGATTGGGTTTAGGCACTTTAGCCATCTTCTTAC
CCCTAACCCGCTATTTCGGACATCAAGAATTAGAGTCAGTTCTAAATACTAATTTTTCAGTTGTTTTTCTCTTGATTTTA
GCCCTGGGTAAGATGGCATCAATCAGTTTAACAGTCACTGGTGGGTGGCGTGGTGGTTTCATTATTCCCCTATTTTTTAC
TGGTGCTTGTGTTGGCAAAGCAATTGCAATTTTAATTCCGGGGTTGAATCCTACACTAGCTATGATATGCACAATGTCAG
CTCTTAATGCAGGAGTGACACGCACACCTATAAGTACAACTTTGTTGTTATCAAAACTGACTAATTTTAGCCCTTTTACA
CCAATCCTTTTTGCGAGCTTGATTGGTTTTTTTCTCGCACCAAAAGTCCCCTTAATAGCTTCTCAGCTTAAATCACAGCA
GTCTATTGAAGAGATACAAAGTTAA

Upstream 100 bases:

>100_bases
AATTTTGGTCAGTTTGTACGTATTTTGTCTTACCTTCTACATTAGTATAATAAATGTCAAGAATCTATAACATTTGATTC
ATTTAGCTAGGGAATCAACA

Downstream 100 bases:

>100_bases
GTCATGGTCAAAATCTGCTGCAAAAAGATTTTGACATAAAGATTCAGCAATACCAATTTGGAAAATAAATTTAGGTGATT
GTAGCAAAGAGGAGCTTTCT

Product: voltage gated Cl- channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MLPNKRTPTNQAQRWKFLQLFGLVRRNPLLISRWVLRWVMVGTVCGLFAGLYWNVLELMTHQLERFESVSLLIVMPIAGL
IVGLVIHFLGNPGEIAVIVDNIHFRGGRLDIRKNPAMILASLVSIAGGGSAGPEAPLVQVTGSFGTWVGDRLGLQGEDMR
SMSLAAMAAGFTALFGAPLGGAMFALEILHHQHIIEYYEALMPAIVSSCASYLVFALITHLGIAPTWHFPEYNLENMDDF
AWAILFGIIGAVAGWIFMTIFRTCDRLWAMLPVPVYIRTTLAGLGLGTLAIFLPLTRYFGHQELESVLNTNFSVVFLLIL
ALGKMASISLTVTGGWRGGFIIPLFFTGACVGKAIAILIPGLNPTLAMICTMSALNAGVTRTPISTTLLLSKLTNFSPFT
PILFASLIGFFLAPKVPLIASQLKSQQSIEEIQS

Sequences:

>Translated_434_residues
MLPNKRTPTNQAQRWKFLQLFGLVRRNPLLISRWVLRWVMVGTVCGLFAGLYWNVLELMTHQLERFESVSLLIVMPIAGL
IVGLVIHFLGNPGEIAVIVDNIHFRGGRLDIRKNPAMILASLVSIAGGGSAGPEAPLVQVTGSFGTWVGDRLGLQGEDMR
SMSLAAMAAGFTALFGAPLGGAMFALEILHHQHIIEYYEALMPAIVSSCASYLVFALITHLGIAPTWHFPEYNLENMDDF
AWAILFGIIGAVAGWIFMTIFRTCDRLWAMLPVPVYIRTTLAGLGLGTLAIFLPLTRYFGHQELESVLNTNFSVVFLLIL
ALGKMASISLTVTGGWRGGFIIPLFFTGACVGKAIAILIPGLNPTLAMICTMSALNAGVTRTPISTTLLLSKLTNFSPFT
PILFASLIGFFLAPKVPLIASQLKSQQSIEEIQS
>Mature_434_residues
MLPNKRTPTNQAQRWKFLQLFGLVRRNPLLISRWVLRWVMVGTVCGLFAGLYWNVLELMTHQLERFESVSLLIVMPIAGL
IVGLVIHFLGNPGEIAVIVDNIHFRGGRLDIRKNPAMILASLVSIAGGGSAGPEAPLVQVTGSFGTWVGDRLGLQGEDMR
SMSLAAMAAGFTALFGAPLGGAMFALEILHHQHIIEYYEALMPAIVSSCASYLVFALITHLGIAPTWHFPEYNLENMDDF
AWAILFGIIGAVAGWIFMTIFRTCDRLWAMLPVPVYIRTTLAGLGLGTLAIFLPLTRYFGHQELESVLNTNFSVVFLLIL
ALGKMASISLTVTGGWRGGFIIPLFFTGACVGKAIAILIPGLNPTLAMICTMSALNAGVTRTPISTTLLLSKLTNFSPFT
PILFASLIGFFLAPKVPLIASQLKSQQSIEEIQS

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 47235; Mature: 47235

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPNKRTPTNQAQRWKFLQLFGLVRRNPLLISRWVLRWVMVGTVCGLFAGLYWNVLELMT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQLERFESVSLLIVMPIAGLIVGLVIHFLGNPGEIAVIVDNIHFRGGRLDIRKNPAMILA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECEEECCCEEEECCCHHHHHH
SLVSIAGGGSAGPEAPLVQVTGSFGTWVGDRLGLQGEDMRSMSLAAMAAGFTALFGAPLG
HHHHHCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GAMFALEILHHQHIIEYYEALMPAIVSSCASYLVFALITHLGIAPTWHFPEYNLENMDDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
AWAILFGIIGAVAGWIFMTIFRTCDRLWAMLPVPVYIRTTLAGLGLGTLAIFLPLTRYFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
HQELESVLNTNFSVVFLLILALGKMASISLTVTGGWRGGFIIPLFFTGACVGKAIAILIP
HHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHEEC
GLNPTLAMICTMSALNAGVTRTPISTTLLLSKLTNFSPFTPILFASLIGFFLAPKVPLIA
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH
SQLKSQQSIEEIQS
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLPNKRTPTNQAQRWKFLQLFGLVRRNPLLISRWVLRWVMVGTVCGLFAGLYWNVLELMT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQLERFESVSLLIVMPIAGLIVGLVIHFLGNPGEIAVIVDNIHFRGGRLDIRKNPAMILA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECEEECCCEEEECCCHHHHHH
SLVSIAGGGSAGPEAPLVQVTGSFGTWVGDRLGLQGEDMRSMSLAAMAAGFTALFGAPLG
HHHHHCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GAMFALEILHHQHIIEYYEALMPAIVSSCASYLVFALITHLGIAPTWHFPEYNLENMDDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
AWAILFGIIGAVAGWIFMTIFRTCDRLWAMLPVPVYIRTTLAGLGLGTLAIFLPLTRYFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
HQELESVLNTNFSVVFLLILALGKMASISLTVTGGWRGGFIIPLFFTGACVGKAIAILIP
HHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHEEC
GLNPTLAMICTMSALNAGVTRTPISTTLLLSKLTNFSPFTPILFASLIGFFLAPKVPLIA
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH
SQLKSQQSIEEIQS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]