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The map label for this gene is yoeB [H]

Identifier: 75908309

GI number: 75908309

Start: 2578617

End: 2578949

Strand: Direct

Name: yoeB [H]

Synonym: Ava_2088

Alternate gene names: 75908309

Gene position: 2578617-2578949 (Clockwise)

Preceding gene: 75908308

Following gene: 75908311

Centisome position: 40.51

GC content: 40.54

Gene sequence:

>333_bases
ATGTCTTCAGATAATTTAGAACCAGAACCCCTTTCTCCATCTGAAGTTTCCCTAGAAAATAATTCAGAACGCGACCTTGT
TTTTGATAAGAGATTTTTGGAAGACCTTACCTATTGGGTAGAGACAAATAGAAAGACTGCACTCCGCGTATTATCTTTAG
TAGAAGAGATTAGACGCAATCCCTTTCAAGGAACAGGCAACCCTGAACCATTAAAATATCGGGATGCAAACGTTTGGTCG
CGCCGAATTAATCAGACTGACCGGATTGTTTATGTCGTTACTGATAGCCGAATTGAGTTTATTCAAGCTCGGTATCACTA
TAGCGATCGCTGA

Upstream 100 bases:

>100_bases
AGATGCTTTACAGCGAGTGAAGGCTAAGACGAATCATCCGCAAACCATAGATGAACTCCGCCAGGAATTTGGACTTTATG
AAGAAGAGTAACTAAATTCG

Downstream 100 bases:

>100_bases
TTCTCAAACTTGCTGTAAATAATAGTCGAAACGCTGCCGCAATTGTTCAACTGTTAAATTTTGAGTCCAATATTCAACTA
CTGCATGACCAAAAGCCCAA

Product: addiction module toxin, Txe/YoeB

Products: NA

Alternate protein names: Endoribonuclease YoeB; Putative mRNA interferase YoeB [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSSDNLEPEPLSPSEVSLENNSERDLVFDKRFLEDLTYWVETNRKTALRVLSLVEEIRRNPFQGTGNPEPLKYRDANVWS
RRINQTDRIVYVVTDSRIEFIQARYHYSDR

Sequences:

>Translated_110_residues
MSSDNLEPEPLSPSEVSLENNSERDLVFDKRFLEDLTYWVETNRKTALRVLSLVEEIRRNPFQGTGNPEPLKYRDANVWS
RRINQTDRIVYVVTDSRIEFIQARYHYSDR
>Mature_109_residues
SSDNLEPEPLSPSEVSLENNSERDLVFDKRFLEDLTYWVETNRKTALRVLSLVEEIRRNPFQGTGNPEPLKYRDANVWSR
RINQTDRIVYVVTDSRIEFIQARYHYSDR

Specific function: Part of a toxin-antitoxin (TA) module. Has RNase activity and preferentially cleaves at the 3'-end of purine ribonucleotides [H]

COG id: COG4115

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YoeB family [H]

Homologues:

Organism=Escherichia coli, GI87082025, Length=82, Percent_Identity=40.2439024390244, Blast_Score=79, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009614 [H]

Pfam domain/function: PF06769 Plasmid_Txe [H]

EC number: NA

Molecular weight: Translated: 13094; Mature: 12962

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDNLEPEPLSPSEVSLENNSERDLVFDKRFLEDLTYWVETNRKTALRVLSLVEEIRRN
CCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PFQGTGNPEPLKYRDANVWSRRINQTDRIVYVVTDSRIEFIQARYHYSDR
CCCCCCCCCCCEECCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSDNLEPEPLSPSEVSLENNSERDLVFDKRFLEDLTYWVETNRKTALRVLSLVEEIRRN
CCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PFQGTGNPEPLKYRDANVWSRRINQTDRIVYVVTDSRIEFIQARYHYSDR
CCCCCCCCCCCEECCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]