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The map label for this gene is ndhL

Identifier: 75908301

GI number: 75908301

Start: 2572170

End: 2572382

Strand: Direct

Name: ndhL

Synonym: Ava_2080

Alternate gene names: 75908301

Gene position: 2572170-2572382 (Clockwise)

Preceding gene: 75908300

Following gene: 75908302

Centisome position: 40.41

GC content: 43.66

Gene sequence:

>213_bases
ATGATTGTACCCCTGCTATATCTGGCTTTAGCCGGAGCTTACTTATTAGTTGTCCCTGTTGCTTTAATGTTTTACTTAAA
GCAGCGCTGGTATGTGGTTAGCTCTGTTGAGCGCACCTTTATGTATTTTCTAGTGTTCTTGTTCTTTCCGGGGCTATTGG
TTTTATCCCCATTCGTAAACCTGCGCCCCCGTCCACGCAAAATCGAAGTTTAA

Upstream 100 bases:

>100_bases
TTTAAAAGCCCAATAGTTATGGTGTCTCCAGGCTTTCAGTTCAGCCTATGATGGAAAATAGATGCACCAATTGATCTGAT
CCACTCAAAGACAAGGATTT

Downstream 100 bases:

>100_bases
TCAAGATTGGTAGGTCATAAATCTCATGCGACGTATTGACGCTATTGGAATTGGCATCGGCATTTTCATTGTCGGTGGTT
TGGCATATCTAGGATTCCAG

Product: inorganic carbon transport

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit L; NDH-1 subunit L; NDH-L

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MIVPLLYLALAGAYLLVVPVALMFYLKQRWYVVSSVERTFMYFLVFLFFPGLLVLSPFVNLRPRPRKIEV

Sequences:

>Translated_70_residues
MIVPLLYLALAGAYLLVVPVALMFYLKQRWYVVSSVERTFMYFLVFLFFPGLLVLSPFVNLRPRPRKIEV
>Mature_70_residues
MIVPLLYLALAGAYLLVVPVALMFYLKQRWYVVSSVERTFMYFLVFLFFPGLLVLSPFVNLRPRPRKIEV

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhL subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHL_ANAVT (Q3MBD4)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_322597.1
- STRING:   Q3MBD4
- GeneID:   3680553
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_2080
- NMPDR:   fig|240292.3.peg.1485
- eggNOG:   NOG08765
- OMA:   MNNRWNV
- ProtClustDB:   CLSK893123
- BioCyc:   AVAR240292:AVA_2080-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01355
- InterPro:   IPR019654

Pfam domain/function: PF10716 NdhL

EC number: 1.6.5.3

Molecular weight: Translated: 8226; Mature: 8226

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xfe6e5f8)-; HASH(0x1068ad30)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVPLLYLALAGAYLLVVPVALMFYLKQRWYVVSSVERTFMYFLVFLFFPGLLVLSPFVN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LRPRPRKIEV
CCCCCCCCCH
>Mature Secondary Structure
MIVPLLYLALAGAYLLVVPVALMFYLKQRWYVVSSVERTFMYFLVFLFFPGLLVLSPFVN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LRPRPRKIEV
CCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA