| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908300
Identifier: 75908300
GI number: 75908300
Start: 2570660
End: 2571316
Strand: Direct
Name: 75908300
Synonym: Ava_2079
Alternate gene names: NA
Gene position: 2570660-2571316 (Clockwise)
Preceding gene: 75908299
Following gene: 75908301
Centisome position: 40.38
GC content: 45.05
Gene sequence:
>657_bases GTGGGAGTATATCACCGAATCCGGGTATCTCGTCAGACAACAACTTTACCTAACATAATTCTCACCAAAAAAATGATCGC AGCCAAAGACAAAGCCCCCCAGCTAACCCCACAAGAATACTTTATTTGGGAAGAACAGCAGCTAGAAAAACACGAGTATA TCAACGGCGAAGTTTACGCCATGACTGGCGGTAGCGTCAATCACGGGCGTATCGCCATCCGCTTCACCGCCATGTTCGAC AGCCACTTACAAAATACAGGTTGCATCACTGGAAATTCTGATATCAAAGTCAATATCTTTGGCAGTAATAACTATACCTA CCCAGATGCCAGCGTTACCTGCGACGTTCGCGATCAAACCACAACTCAATATATTACCTACCCTTGCTTAATCGTCGAAG TCCTCTCAAAAACTACCGAAGCCTACGACAGAGGCGGCAAATTCCGAATGTACCGCCAAAACCCAGCTTTGATCGATTAC CTACTAGTCAGTTCTACTAGCGTCGAAATCGACCTGTATCACAAAAACGATGCAGGCGATTGGTTGATTATCAACTACAA ACCAGGCGACACTATCGAACTCAAAAGCATTAACCTCAATTTCCCCATTGAAAAAGTCTATCGCGGTTTAACCCTCGAAC CAGAAAATGGGGGATAG
Upstream 100 bases:
>100_bases TCTTTTATTCGTCATTTAAGTGCTTGTACAGCCCTGGATTTGCTACGGCGGCGCTTGTTGACAAGGTGATATACTCCCAC ACTTGGTGCAAACTGTAAGT
Downstream 100 bases:
>100_bases TATCGAATTATTACCTACGACCCAAATGGCAATTAATGATTGCTAACTTTGGCACTATCCAAACTCAAAAAAAGCTTTCA AAACCCATAAGATTGCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MGVYHRIRVSRQTTTLPNIILTKKMIAAKDKAPQLTPQEYFIWEEQQLEKHEYINGEVYAMTGGSVNHGRIAIRFTAMFD SHLQNTGCITGNSDIKVNIFGSNNYTYPDASVTCDVRDQTTTQYITYPCLIVEVLSKTTEAYDRGGKFRMYRQNPALIDY LLVSSTSVEIDLYHKNDAGDWLIINYKPGDTIELKSINLNFPIEKVYRGLTLEPENGG
Sequences:
>Translated_218_residues MGVYHRIRVSRQTTTLPNIILTKKMIAAKDKAPQLTPQEYFIWEEQQLEKHEYINGEVYAMTGGSVNHGRIAIRFTAMFD SHLQNTGCITGNSDIKVNIFGSNNYTYPDASVTCDVRDQTTTQYITYPCLIVEVLSKTTEAYDRGGKFRMYRQNPALIDY LLVSSTSVEIDLYHKNDAGDWLIINYKPGDTIELKSINLNFPIEKVYRGLTLEPENGG >Mature_217_residues GVYHRIRVSRQTTTLPNIILTKKMIAAKDKAPQLTPQEYFIWEEQQLEKHEYINGEVYAMTGGSVNHGRIAIRFTAMFDS HLQNTGCITGNSDIKVNIFGSNNYTYPDASVTCDVRDQTTTQYITYPCLIVEVLSKTTEAYDRGGKFRMYRQNPALIDYL LVSSTSVEIDLYHKNDAGDWLIINYKPGDTIELKSINLNFPIEKVYRGLTLEPENGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Synechocystis PCC 6803 sll1609 and slr1290 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008538 - InterPro: IPR012296 - InterPro: IPR011335 [H]
Pfam domain/function: PF05685 DUF820 [H]
EC number: NA
Molecular weight: Translated: 24803; Mature: 24672
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVYHRIRVSRQTTTLPNIILTKKMIAAKDKAPQLTPQEYFIWEEQQLEKHEYINGEVYA CCCEEEEEEECCCCCCCCEEEHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHCCCCEEEE MTGGSVNHGRIAIRFTAMFDSHLQNTGCITGNSDIKVNIFGSNNYTYPDASVTCDVRDQT EECCCCCCCEEEEEEEEEEHHHCCCCCEEECCCCEEEEEEECCCEECCCCEEEEEECCCC TTQYITYPCLIVEVLSKTTEAYDRGGKFRMYRQNPALIDYLLVSSTSVEIDLYHKNDAGD CEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCEEEEEEEECCCCCC WLIINYKPGDTIELKSINLNFPIEKVYRGLTLEPENGG EEEEEECCCCEEEEEEEECCCCHHHHHCCCEECCCCCC >Mature Secondary Structure GVYHRIRVSRQTTTLPNIILTKKMIAAKDKAPQLTPQEYFIWEEQQLEKHEYINGEVYA CCEEEEEEECCCCCCCCEEEHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHCCCCEEEE MTGGSVNHGRIAIRFTAMFDSHLQNTGCITGNSDIKVNIFGSNNYTYPDASVTCDVRDQT EECCCCCCCEEEEEEEEEEHHHCCCCCEEECCCCEEEEEEECCCEECCCCEEEEEECCCC TTQYITYPCLIVEVLSKTTEAYDRGGKFRMYRQNPALIDYLLVSSTSVEIDLYHKNDAGD CEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCEEEEEEEECCCCCC WLIINYKPGDTIELKSINLNFPIEKVYRGLTLEPENGG EEEEEECCCCEEEEEEEECCCCHHHHHCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]