| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908144
Identifier: 75908144
GI number: 75908144
Start: 2386763
End: 2387284
Strand: Direct
Name: 75908144
Synonym: Ava_1923
Alternate gene names: NA
Gene position: 2386763-2387284 (Clockwise)
Preceding gene: 75908143
Following gene: 75908145
Centisome position: 37.49
GC content: 42.15
Gene sequence:
>522_bases ATGATGCGTTGGTTAAGTTTAATTCCGATGTTATTGAGTATTCTACTGATGGCTTGTTCTTCACAAAACACAGCCGAAAC ACCTACAGATACTGCTAGTCCTCCGCCTGCACTAGTAGTGAATTCTGGACAAACGCTACCAATTTCAGCTAAAGCAACTG TTCCCAATGGCACAACTATTGAATTAGAAGTGGCAAAAACACAAGAACAGCAGCAAATGGGACTGATGTATCGGCCAGCT TTACCAGATAACAGGGGAATGCTGTTTTCTTTTCCTTCTCCACAACCAGCTAGATTTTGGATGAAGAATGTACCGGTTGC TTTAGATATGGTGTTTTTGCAAAAGGGCGTAGTCAAGTATATTCAGGCTGCTGCACCTCCTTGCCTTAGTGAGCCTTGTC CTACATATGGCCCTGACGTACTTATTGATGCAGTCATAGAGTTACGTGCAGGCAGGGCAGCTGAGTTAAATTTGCAGCCA GGCAATAGTATCAAAATTGAGTTTTTAAATAACCGTAATTAA
Upstream 100 bases:
>100_bases ACCAGTCTCCTCAAGGTGCTAGAAAACATAACCGATAACCGTGGGCTTTTTCGTTTAATTTCTGTAAAATCGAAGTCTAA ATTACAAAATTAAAAATTGT
Downstream 100 bases:
>100_bases AAGTGTTAAATCTCTCAATGGCTTGTATTCCAAGGTAAACCTGATTTTTACTTCATGATCTTTGCGTAAAAAAAACATCA AGTATACGTAAAAAGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MMRWLSLIPMLLSILLMACSSQNTAETPTDTASPPPALVVNSGQTLPISAKATVPNGTTIELEVAKTQEQQQMGLMYRPA LPDNRGMLFSFPSPQPARFWMKNVPVALDMVFLQKGVVKYIQAAAPPCLSEPCPTYGPDVLIDAVIELRAGRAAELNLQP GNSIKIEFLNNRN
Sequences:
>Translated_173_residues MMRWLSLIPMLLSILLMACSSQNTAETPTDTASPPPALVVNSGQTLPISAKATVPNGTTIELEVAKTQEQQQMGLMYRPA LPDNRGMLFSFPSPQPARFWMKNVPVALDMVFLQKGVVKYIQAAAPPCLSEPCPTYGPDVLIDAVIELRAGRAAELNLQP GNSIKIEFLNNRN >Mature_173_residues MMRWLSLIPMLLSILLMACSSQNTAETPTDTASPPPALVVNSGQTLPISAKATVPNGTTIELEVAKTQEQQQMGLMYRPA LPDNRGMLFSFPSPQPARFWMKNVPVALDMVFLQKGVVKYIQAAAPPCLSEPCPTYGPDVLIDAVIELRAGRAAELNLQP GNSIKIEFLNNRN
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18850; Mature: 18850
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRWLSLIPMLLSILLMACSSQNTAETPTDTASPPPALVVNSGQTLPISAKATVPNGTTI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCEE ELEVAKTQEQQQMGLMYRPALPDNRGMLFSFPSPQPARFWMKNVPVALDMVFLQKGVVKY EEEECCCHHHHHCCCEECCCCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHH IQAAAPPCLSEPCPTYGPDVLIDAVIELRAGRAAELNLQPGNSIKIEFLNNRN HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCC >Mature Secondary Structure MMRWLSLIPMLLSILLMACSSQNTAETPTDTASPPPALVVNSGQTLPISAKATVPNGTTI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCEE ELEVAKTQEQQQMGLMYRPALPDNRGMLFSFPSPQPARFWMKNVPVALDMVFLQKGVVKY EEEECCCHHHHHCCCEECCCCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHH IQAAAPPCLSEPCPTYGPDVLIDAVIELRAGRAAELNLQPGNSIKIEFLNNRN HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA