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The map label for this gene is ykoG [H]

Identifier: 75908143

GI number: 75908143

Start: 2385705

End: 2386391

Strand: Direct

Name: ykoG [H]

Synonym: Ava_1922

Alternate gene names: 75908143

Gene position: 2385705-2386391 (Clockwise)

Preceding gene: 75908142

Following gene: 75908144

Centisome position: 37.48

GC content: 42.07

Gene sequence:

>687_bases
ATGATAGCTACTCATAGCCCCTGTGTTTTGGTGATCGAAACTGATGATAGCCTAGCGAATCAACTGTCTTTTGATTTACA
AGAAGCTGGCTATGATGCTATTTTGGCGAGCGATGCGACTACTGGGTTACAATACTGTCGCGATCGCCAGCCTGCTTTAG
TTGTATTGGACAGAATGCTGGCGGGTGAATCTGGTCTTTCTTTGTGCAAAAATCTCAGGAATACCGGAGTGCGATCGCCA
GTATTAGTTTTAATGGCTAGGGACACAGTTGATGATCGGGTTGCTTGTCTAGAAGCAGGGGCTGATGATTATATTCTTAA
ACCTTATCGCCCAGAAGATTTTTTAAGACTGATTCGCCTCTACTTGAAACCAGATGTCGATACCACAGAACAGTTACGCT
TTGGTGATTTGATTTTAGACCTAGCTAATCGCCGCGCTGTTTACAGTGGACGAAATGTCGAGTTAACAATGAAAGAATTT
GAACTTTTAAAATACTTAATGGAACATCCCCGTGAAGTATTAACCCGCGAACAAATTCTCGAAAACGTCTGGGGTTACGA
TTTTATGGGTGAATCTAATGTTATAGAAGTGTATATTCGCTACTTACGCTTAAAAATTGAGGATGAAGGTCAAAAGCGTC
TAATTCAAACGGTGCGAGGCGTTGGTTACGTCCTTAGAGAGTCCTAA

Upstream 100 bases:

>100_bases
TCAGTAGAATTACCTTAGTCAATAGTCAATAGTTATTCCCCTTTCCCCCACTCCCCATTTATTGCCTATACAATTAAACA
TCCTAATATCCCCAAATCTT

Downstream 100 bases:

>100_bases
AAATTTAACTTCGTAGTAATGCAAATTACATTCTATAATTAAGCACTCCCACTCTCTCACAGGTGGGATATTTGCTTTAT
GGCAGGTTATACCAATTCAA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIATHSPCVLVIETDDSLANQLSFDLQEAGYDAILASDATTGLQYCRDRQPALVVLDRMLAGESGLSLCKNLRNTGVRSP
VLVLMARDTVDDRVACLEAGADDYILKPYRPEDFLRLIRLYLKPDVDTTEQLRFGDLILDLANRRAVYSGRNVELTMKEF
ELLKYLMEHPREVLTREQILENVWGYDFMGESNVIEVYIRYLRLKIEDEGQKRLIQTVRGVGYVLRES

Sequences:

>Translated_228_residues
MIATHSPCVLVIETDDSLANQLSFDLQEAGYDAILASDATTGLQYCRDRQPALVVLDRMLAGESGLSLCKNLRNTGVRSP
VLVLMARDTVDDRVACLEAGADDYILKPYRPEDFLRLIRLYLKPDVDTTEQLRFGDLILDLANRRAVYSGRNVELTMKEF
ELLKYLMEHPREVLTREQILENVWGYDFMGESNVIEVYIRYLRLKIEDEGQKRLIQTVRGVGYVLRES
>Mature_228_residues
MIATHSPCVLVIETDDSLANQLSFDLQEAGYDAILASDATTGLQYCRDRQPALVVLDRMLAGESGLSLCKNLRNTGVRSP
VLVLMARDTVDDRVACLEAGADDYILKPYRPEDFLRLIRLYLKPDVDTTEQLRFGDLILDLANRRAVYSGRNVELTMKEF
ELLKYLMEHPREVLTREQILENVWGYDFMGESNVIEVYIRYLRLKIEDEGQKRLIQTVRGVGYVLRES

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=219, Percent_Identity=34.703196347032, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1786784, Length=219, Percent_Identity=36.5296803652968, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI87082012, Length=215, Percent_Identity=35.3488372093023, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=34.9557522123894, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=34.070796460177, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=33.4841628959276, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=35.3211009174312, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=29.8165137614679, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=30.4932735426009, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=26.9565217391304, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=31.2775330396476, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI145693140, Length=190, Percent_Identity=30, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=26.5486725663717, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26096; Mature: 26096

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATHSPCVLVIETDDSLANQLSFDLQEAGYDAILASDATTGLQYCRDRQPALVVLDRML
CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHH
AGESGLSLCKNLRNTGVRSPVLVLMARDTVDDRVACLEAGADDYILKPYRPEDFLRLIRL
CCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHH
YLKPDVDTTEQLRFGDLILDLANRRAVYSGRNVELTMKEFELLKYLMEHPREVLTREQIL
HHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHH
ENVWGYDFMGESNVIEVYIRYLRLKIEDEGQKRLIQTVRGVGYVLRES
HHHCCCCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIATHSPCVLVIETDDSLANQLSFDLQEAGYDAILASDATTGLQYCRDRQPALVVLDRML
CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHH
AGESGLSLCKNLRNTGVRSPVLVLMARDTVDDRVACLEAGADDYILKPYRPEDFLRLIRL
CCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHH
YLKPDVDTTEQLRFGDLILDLANRRAVYSGRNVELTMKEFELLKYLMEHPREVLTREQIL
HHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHH
ENVWGYDFMGESNVIEVYIRYLRLKIEDEGQKRLIQTVRGVGYVLRES
HHHCCCCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]