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The map label for this gene is nudF [H]

Identifier: 75908044

GI number: 75908044

Start: 2269721

End: 2270152

Strand: Direct

Name: nudF [H]

Synonym: Ava_1823

Alternate gene names: 75908044

Gene position: 2269721-2270152 (Clockwise)

Preceding gene: 75908042

Following gene: 75908045

Centisome position: 35.66

GC content: 46.06

Gene sequence:

>432_bases
ATGAATTATAGAAATCCTACACCTACGGTTGATATCATCATTGAGTTGGTAGATAGACCACATAGACCGATAGTATTAAT
TGAGCGACATAATCAGCCTTTCGGTTGGGCGCTTCCTGGGGGTTTTGTGGATTATGGGGAAGCGGTGGAAGTAGCGGCGC
GGCGGGAAGCGGAAGAAGAAACAGGTTTACAGGTGGAGTTAGTTGAACAGTTGTTAGTGTATTCTGATCCCAGCCGTGAC
CCGCGTCAGCACACAATTAGTATTGTATTTTTGGCAACAGCAACGGGAGAACCAAAAGCGGGGGATGATGCTAAAGGTGT
AGGCGTTTTTGAGTCTTGGCTTGTACCTAGTAATTTATGTTTTGACCACGATCGCATTTTGCGGGATTATTGGCGTTATC
GACATTATGGGATTCGTCCCAGGTTGGGCTAA

Upstream 100 bases:

>100_bases
AGGAGAGTGGGGGAAACTAATGAGTAATAACAATTCTACAGACGTGATTAATCGCGTCTTTGACAACTGACTAATGACTA
ATGACTATTGACTATTGAAA

Downstream 100 bases:

>100_bases
ACAAAGCGAAATTTGTCTGCAACCAATCGTCAAAAGCTGACACTGAGACTTCCAAATTCCCAAACTTAAGGCGTAATCAT
ATCTATGGCTCATCAAGTTA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNYRNPTPTVDIIIELVDRPHRPIVLIERHNQPFGWALPGGFVDYGEAVEVAARREAEEETGLQVELVEQLLVYSDPSRD
PRQHTISIVFLATATGEPKAGDDAKGVGVFESWLVPSNLCFDHDRILRDYWRYRHYGIRPRLG

Sequences:

>Translated_143_residues
MNYRNPTPTVDIIIELVDRPHRPIVLIERHNQPFGWALPGGFVDYGEAVEVAARREAEEETGLQVELVEQLLVYSDPSRD
PRQHTISIVFLATATGEPKAGDDAKGVGVFESWLVPSNLCFDHDRILRDYWRYRHYGIRPRLG
>Mature_143_residues
MNYRNPTPTVDIIIELVDRPHRPIVLIERHNQPFGWALPGGFVDYGEAVEVAARREAEEETGLQVELVEQLLVYSDPSRD
PRQHTISIVFLATATGEPKAGDDAKGVGVFESWLVPSNLCFDHDRILRDYWRYRHYGIRPRLG

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 16367; Mature: 16367

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRNPTPTVDIIIELVDRPHRPIVLIERHNQPFGWALPGGFVDYGEAVEVAARREAEEE
CCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHCCHHH
TGLQVELVEQLLVYSDPSRDPRQHTISIVFLATATGEPKAGDDAKGVGVFESWLVPSNLC
HCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCC
FDHDRILRDYWRYRHYGIRPRLG
CCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNYRNPTPTVDIIIELVDRPHRPIVLIERHNQPFGWALPGGFVDYGEAVEVAARREAEEE
CCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHCCHHH
TGLQVELVEQLLVYSDPSRDPRQHTISIVFLATATGEPKAGDDAKGVGVFESWLVPSNLC
HCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCC
FDHDRILRDYWRYRHYGIRPRLG
CCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]