| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is cdsA [H]
Identifier: 75908039
GI number: 75908039
Start: 2264032
End: 2265030
Strand: Direct
Name: cdsA [H]
Synonym: Ava_1818
Alternate gene names: 75908039
Gene position: 2264032-2265030 (Clockwise)
Preceding gene: 75908038
Following gene: 75908041
Centisome position: 35.57
GC content: 43.44
Gene sequence:
>999_bases ATGAGAATGGAGAGTAGGGGGAGCAAAAGAGAAAACAAACCCCCAGTACCCAATCCCCAGTACCCAATCCCCATTACCCC TTATCCCCAGTACCCAACCCCGAATACTTCTATGCCTTGGTCTCGGATTATTAGTGGAATTGTTGCGATCGCCCTTGCTT TAGTTGCTGTCCTGTTGGGGGGTTGGTATTTCACCATCATGCTGGCGATTGTTGTTTTCTTAGGACAACAGGAATATTTT GATTTAGTTCGCACTAGAGGTATTTTGCCAGCTGCGAAAACCACTTTATTCCTTAGTCAAGTTTTACTAGTTACTTGTAC TGTGGACAGCAATTTAGTTGATGCTGTCATGCCTATTGCAGGTACATTTATTTGCTTTTATTTACTATTTCAACCGAAAA TGGCCACAATCGCCGATGTTTCGGCATCGATTATGGGGCTTTTTTATGTCGGGTACTTACCGAGTTATTGGGTGCGGTTG CGTTCAATTGGTACCACAGCCATCAGTAATTTACCTTTAGGGGGCTACTGGCCAGGAAGTTTGACAGATATTCTTGAAGA AAGAAATTTTGCCTCTCTACCCCAAGGTTTGAAAATCACAGTGCTGACATTTCTGTGCATCTGGGCAGCAGACATTGGTG CATATACTATTGGTAAATTCTTCGGCAAAACTCGTCTGTCTGATATCAGCCCGAAAAAAACAGTGGAAGGTGCTGTTTTT GGGATCAGTGCTAGTTTAGCAGTAGCTCTGGCTGGCGCTTACTACCTTCACTTACCCAAATTTCTTTTGACTGGAACAAT TTTAGGCTTACTAATTGGCTTGGCTAGTCTTTTGGGCGATCTTACTGAGTCAATGCTAAAGCGTGATGCTGGTGTAAAGG ACTCTGGACAATTGATCCCCGGTCATGGTGGCATTTTAGATCGCACAGATAGTTATATCTTCACTGCCCCTTTGGTTTAC TATTTCGTCACGCTCATTTTGCCATTGCTTAGTCAATAG
Upstream 100 bases:
>100_bases TAGAAACACGAGGATTTTCTCAAACCTTTGCCGCAGTTGATCCCATTTTTATCCTCAGTGGTGAGAAACTAGACTAGGGA CTGGGGACTAGGAAGAGTAG
Downstream 100 bases:
>100_bases TTCAGTGGTCAGTGGTCAGTGGTCAGTGGTCAGTGGTCAGTTATCATTCTTCTTTACTTCCCTTGATCCCCCTGCCTCCT GCCCACTCTATAATCACGGA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRMESRGSKRENKPPVPNPQYPIPITPYPQYPTPNTSMPWSRIISGIVAIALALVAVLLGGWYFTIMLAIVVFLGQQEYF DLVRTRGILPAAKTTLFLSQVLLVTCTVDSNLVDAVMPIAGTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYWVRL RSIGTTAISNLPLGGYWPGSLTDILEERNFASLPQGLKITVLTFLCIWAADIGAYTIGKFFGKTRLSDISPKKTVEGAVF GISASLAVALAGAYYLHLPKFLLTGTILGLLIGLASLLGDLTESMLKRDAGVKDSGQLIPGHGGILDRTDSYIFTAPLVY YFVTLILPLLSQ
Sequences:
>Translated_332_residues MRMESRGSKRENKPPVPNPQYPIPITPYPQYPTPNTSMPWSRIISGIVAIALALVAVLLGGWYFTIMLAIVVFLGQQEYF DLVRTRGILPAAKTTLFLSQVLLVTCTVDSNLVDAVMPIAGTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYWVRL RSIGTTAISNLPLGGYWPGSLTDILEERNFASLPQGLKITVLTFLCIWAADIGAYTIGKFFGKTRLSDISPKKTVEGAVF GISASLAVALAGAYYLHLPKFLLTGTILGLLIGLASLLGDLTESMLKRDAGVKDSGQLIPGHGGILDRTDSYIFTAPLVY YFVTLILPLLSQ >Mature_332_residues MRMESRGSKRENKPPVPNPQYPIPITPYPQYPTPNTSMPWSRIISGIVAIALALVAVLLGGWYFTIMLAIVVFLGQQEYF DLVRTRGILPAAKTTLFLSQVLLVTCTVDSNLVDAVMPIAGTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYWVRL RSIGTTAISNLPLGGYWPGSLTDILEERNFASLPQGLKITVLTFLCIWAADIGAYTIGKFFGKTRLSDISPKKTVEGAVF GISASLAVALAGAYYLHLPKFLLTGTILGLLIGLASLLGDLTESMLKRDAGVKDSGQLIPGHGGILDRTDSYIFTAPLVY YFVTLILPLLSQ
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=134, Percent_Identity=42.5373134328358, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787677, Length=117, Percent_Identity=46.1538461538462, Blast_Score=95, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 36131; Mature: 36131
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMESRGSKRENKPPVPNPQYPIPITPYPQYPTPNTSMPWSRIISGIVAIALALVAVLLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GWYFTIMLAIVVFLGQQEYFDLVRTRGILPAAKTTLFLSQVLLVTCTVDSNLVDAVMPIA HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYWVRLRSIGTTAISNLPLGGYWPGS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH LTDILEERNFASLPQGLKITVLTFLCIWAADIGAYTIGKFFGKTRLSDISPKKTVEGAVF HHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GISASLAVALAGAYYLHLPKFLLTGTILGLLIGLASLLGDLTESMLKRDAGVKDSGQLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GHGGILDRTDSYIFTAPLVYYFVTLILPLLSQ CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRMESRGSKRENKPPVPNPQYPIPITPYPQYPTPNTSMPWSRIISGIVAIALALVAVLLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GWYFTIMLAIVVFLGQQEYFDLVRTRGILPAAKTTLFLSQVLLVTCTVDSNLVDAVMPIA HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYWVRLRSIGTTAISNLPLGGYWPGS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH LTDILEERNFASLPQGLKITVLTFLCIWAADIGAYTIGKFFGKTRLSDISPKKTVEGAVF HHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GISASLAVALAGAYYLHLPKFLLTGTILGLLIGLASLLGDLTESMLKRDAGVKDSGQLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GHGGILDRTDSYIFTAPLVYYFVTLILPLLSQ CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]