Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75676504

Identifier: 75676504

GI number: 75676504

Start: 2537868

End: 2539253

Strand: Direct

Name: 75676504

Synonym: Nwi_2319

Alternate gene names: NA

Gene position: 2537868-2539253 (Clockwise)

Preceding gene: 75676503

Following gene: 75676505

Centisome position: 74.6

GC content: 64.07

Gene sequence:

>1386_bases
ATGTCCAACTCCTTCTCAGCCCTGGCTCTGCACCGCACGGTCTGGCGCTGGCATTTCTATGCCGGTCTCGTGGTCGCACC
CTTCATGTTCATTCTCGCCGTGACGGGCGCGATCTATCTCTTCAATGACGAGATCAACGATGTGCTCCATCGTGATCTAC
GCATTGTCGCGCCGGTGTCCGAACCGGCGCCGCTCAGCAAGATGGCCGAGGCTGCGATCACCGCCTATCCCGGCGGAAAG
GTCACCCGCATCGATACGGCTCGGGCGACGAACCGCAGCGTGGAAGTATTCGTGACACCGGCGACAGGTGATGCGGTCCG
CGTGTTCGTTGATCCCGGCACCGGGCGGGTTCTCGGCTCCTATGTCTATGCCCGCACGCTGGTCGGCTTCGCCGACATCG
CGCACGGCTCGCTGACGCTGGGGAGCATCGGCGACAATATCGTCGAACTCGCTGCCTGCTGGGGCTTCATCCTCGTGGCG
ACAGGCCTTTACCTGTGGTGGCCGCGCGGCCGCTTCCGTCTCGGCGGTGTTCTCTATCCACGAATTGGCCGGCGCGGACG
GCCGTTCTGGAAGGAATGGCACGCGGTGGTGGGCATGTGGTCCGCCTTTCTCATCATGTTCCTGATCCTCACGGGCCTGC
CATGGGCATCCTTCTGGGGCGACTTGCTGCGCCGCGGCACCGACCTCGCCGGCATCGGCTATCCGGCAAATCACAGGCTT
CAAGGAACGACGCCGTCCACGACGACGGTCAAGGACGCAGCGGGCAATGCCGCGCCCTGGACGCTGGAGCAGGCGCCGAT
TCCGGATTCCGATCCGCATGCCGGGCATCACGGGCACATCACCTCCGCGCCCGCCGCGAAACGCATGCTCGGCGTCGACG
ACGTTGCCGCGATCCTGACGCGCGAGGGTTTGATGGCTCCGTATCGCCTGATCCTGCCGAAGAACGCCAGCGGCGTGTTC
ACCGCCTTCAGCTATCCCGATCAGCCGGAGACGCAGCGCACGCTCCATGTTGATCAGTACTCAGGTCGCGTGATCGGCGA
TGTCCGTTTCGCCGACTATGGATGGGCCGCGAAGGCCGTGGAACTCGGCGTCCAGATCCACATGGGCAACTACTTCGGAC
GCCTCAACCAGATCGTGATGCTGATCCCCTGTATCGGCATCATCGTCCTGACGATCACAGGTCCCCTCATGTGGTGGCGG
CGACGTCCGAAAGGAGAATTTGCAGCGCCGCAGCCGCTATCTTCTCCACGGCTGCGCACGTCGGCGATGATCGTCATCGG
GCTCTGCGTGATGTTCCCGCTGGCGGGGGCGTCACTGGCGCTGGCGATGATTGCCGACTGGGTGTGGGAACAATCGCCTG
CGTACCGGCTTCGGCCCGGACAGTGA

Upstream 100 bases:

>100_bases
TCGACCTCTCCTACAACGTCAGGTTCTGATGCGTGAAACACGGCGTCTCGCCGGTGCTCCGATGAGGCGTCCCCATTCCG
ATGTCTGAAAGCAAACGCCG

Downstream 100 bases:

>100_bases
AGGGATCAGCAAACAATCGCGGCGCAACAAGCGCGTCGCGATTTGCCGGCGGCTTGCCTTGTGCGCCTTCCCTGTCCTAT
ATCGGGCGCACGCCGCCTTG

Product: propeptide, PepSY amd peptidase M4

Products: NA

Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Domain-Containing Protein; Sulfite Reductase; PepSY-Associated TM Helix Family; Peptidase; Flavodoxin/Nitric Oxide Synthase; PepSY-Associated TM Helix; PepSY-Associated TM Helix Family Protein; Iron-Uptake Factor; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Containing Protein; Sulfite Reductase Flavoprotein Component; Sulfite Reductase Flavoprotein Alpha-Component; Transmembrane Protein; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; Oxidoreductase; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase; Bifunctional Protein Flavoprotein Alpha-Component; Transporter-Like Membrane Protein; Bifunctional Sulfite Reductase; Sulfite Reductase Flavoprotein Subunit Alpha; Protein Containing PepSY-Associated TM Helix; Transmembrane Transporter; Iron-Regulated Transmembrane Protein

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MSNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVSEPAPLSKMAEAAITAYPGGK
VTRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGSYVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVA
TGLYLWWPRGRFRLGGVLYPRIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRL
QGTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILTREGLMAPYRLILPKNASGVF
TAFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAVELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWR
RRPKGEFAAPQPLSSPRLRTSAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ

Sequences:

>Translated_461_residues
MSNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVSEPAPLSKMAEAAITAYPGGK
VTRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGSYVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVA
TGLYLWWPRGRFRLGGVLYPRIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRL
QGTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILTREGLMAPYRLILPKNASGVF
TAFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAVELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWR
RRPKGEFAAPQPLSSPRLRTSAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ
>Mature_460_residues
SNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVSEPAPLSKMAEAAITAYPGGKV
TRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGSYVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVAT
GLYLWWPRGRFRLGGVLYPRIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRLQ
GTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILTREGLMAPYRLILPKNASGVFT
AFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAVELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWRR
RPKGEFAAPQPLSSPRLRTSAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50544; Mature: 50413

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHCCEEEEECCC
EPAPLSKMAEAAITAYPGGKVTRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGS
CCCCHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHH
YVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVATGLYLWWPRGRFRLGGVLYP
HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCHHEECCCCCEEECCEECC
RIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCC
QGTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILT
CCCCCCCCEEHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH
REGLMAPYRLILPKNASGVFTAFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAV
HCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHH
ELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWRRRPKGEFAAPQPLSSPRLRT
HCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
SAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHCCEEEEECCC
EPAPLSKMAEAAITAYPGGKVTRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGS
CCCCHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHH
YVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVATGLYLWWPRGRFRLGGVLYP
HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCHHEECCCCCEEECCEECC
RIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCC
QGTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILT
CCCCCCCCEEHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH
REGLMAPYRLILPKNASGVFTAFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAV
HCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHH
ELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWRRRPKGEFAAPQPLSSPRLRT
HCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
SAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA