| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is sugE [H]
Identifier: 75676505
GI number: 75676505
Start: 2539381
End: 2539701
Strand: Direct
Name: sugE [H]
Synonym: Nwi_2320
Alternate gene names: 75676505
Gene position: 2539381-2539701 (Clockwise)
Preceding gene: 75676504
Following gene: 75676506
Centisome position: 74.64
GC content: 55.76
Gene sequence:
>321_bases ATGTCTTGGCTATACCTTTTCCTTGCGGGCCTCGCTGAAACAGGATGGGCTATCGGCTTGAAGTACACAGACGGGTTCAC GCGTCTGTGGCCGAGCGTGTTCACCGGTTTGGGAATGGCGCTCAGCTTCATGCTGTTGTCGATTGCGATACGAACCTTGC CGGTCGGCACAGCTTACGCAATCTGGACTGGAATCGGGGCCACCGGAACAGCTCTGTTGGGCATGTGGCTTTTTTCCGAG CCTGCAACAATAGCGAGGTTTGCATGCCTGGGGCTGATCATCATCGGCATGGTCGGCCTCAAAGTCGTTTCACCTGCTTG A
Upstream 100 bases:
>100_bases CAAGCGCGTCGCGATTTGCCGGCGGCTTGCCTTGTGCGCCTTCCCTGTCCTATATCGGGCGCACGCCGCCTTGAGCGGCA GGACAGCCAGCGGTGCCCAG
Downstream 100 bases:
>100_bases GCTTAACGAATTTCCGGGAAGGCTAAATGATGCTGGACACCTCTGGTCACCCTTCCAACCGTGAGCAGGATGAAAATCGC GCGAGCGAGGATTCGCCGTC
Product: small multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSWLYLFLAGLAETGWAIGLKYTDGFTRLWPSVFTGLGMALSFMLLSIAIRTLPVGTAYAIWTGIGATGTALLGMWLFSE PATIARFACLGLIIIGMVGLKVVSPA
Sequences:
>Translated_106_residues MSWLYLFLAGLAETGWAIGLKYTDGFTRLWPSVFTGLGMALSFMLLSIAIRTLPVGTAYAIWTGIGATGTALLGMWLFSE PATIARFACLGLIIIGMVGLKVVSPA >Mature_105_residues SWLYLFLAGLAETGWAIGLKYTDGFTRLWPSVFTGLGMALSFMLLSIAIRTLPVGTAYAIWTGIGATGTALLGMWLFSEP ATIARFACLGLIIIGMVGLKVVSPA
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=101, Percent_Identity=56.4356435643564, Blast_Score=110, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 11262; Mature: 11130
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLYLFLAGLAETGWAIGLKYTDGFTRLWPSVFTGLGMALSFMLLSIAIRTLPVGTAYA CHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH IWTGIGATGTALLGMWLFSEPATIARFACLGLIIIGMVGLKVVSPA HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SWLYLFLAGLAETGWAIGLKYTDGFTRLWPSVFTGLGMALSFMLLSIAIRTLPVGTAYA HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH IWTGIGATGTALLGMWLFSEPATIARFACLGLIIIGMVGLKVVSPA HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]