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The map label for this gene is ctaD2 [H]

Identifier: 75676499

GI number: 75676499

Start: 2531256

End: 2533775

Strand: Direct

Name: ctaD2 [H]

Synonym: Nwi_2314

Alternate gene names: 75676499

Gene position: 2531256-2533775 (Clockwise)

Preceding gene: 75676498

Following gene: 75676500

Centisome position: 74.4

GC content: 64.33

Gene sequence:

>2520_bases
ATGAGCGGGCGGGTGGCGACGCCGCTGCGGCTCCACAGGCAGCTCAACGAAATCTGGGCCAGCGGACGCGGTGTGAAACG
GCTCGCGGCGGTCAACCACAGCGTCATCGGCACGCGCTTCATGATCACCGCCTTCATCTTCTTCGGCATCGGCGGCCTGC
TGGCGATGCTGATCCGCGCCCAACTCGCCACCTCCCGCTCCGCCTTCATCGGACCCGATCTCTACAATCAGCTCTTCACG
ATGCACGGCACCATCATGATGTTTCTGTTCGCGATCCCGATGTTCGAGGGCATGGCGATCTACCTGCTGCCGAAGCTTCT
CGGCACACGCGATCTCGCCTTTCCGCGGCTGGGGGCGTTCGGCTACTGGTGCTACCTGTTCGGCGGCGCGATCCTGATCG
CGGCGATGCTCGCGGGCGCGGCGCCCGACTCCGGCTGGTTCATGTATACGCCACTTTCGTCCAGCGCCTTCACCCCCGGC
ATCAATGCCGACGTCTGGCTGCTCGGCATCACTTTCGTCGAAATCTCCGCCGTGACCGCCGCCGTCGAACTGGTGGTGTC
CATCCTGAAGATCCGCGCGCCGGGCATGTCGCTCAGCCGCATGCCCATCTTCGGCTGGTATGTGCTGGTGACCGCCGGAA
TGATGGTCCTCGGATTCCCGCCGCTGATCCTCGGCTCCGTCCTGCTGGAACTGGAGCGCGCATTCGATCTTCCTTTCTTC
GACACCGCGCGCGGCGGCGACGCGCTGCTGTGGCAGCATCTGTTCTGGCTGTTCGGCCACCCGGAGGTCTACATCATCTT
TCTTCCGGCGGCCGGCGCGATCTCGACCATCCTGCCGGTCTTCGCGCGACGCAAGCTGATAGGATACCGGGCTGTGGTCG
TCGCCCTCGTCGCGCTGGCCTTCCTGTCCTTCGGGTTGTGGGTCCATCACATGTTCGCCGTGGGCATCCCGCATATGGCG
CTCGCCTTCTTTTCAGCGGCCAGCGCCGCCGTCACCGTTCCGACGGCGGTGCAGATTTTCGCATGGATCGCGACGCTCGC
GCATGGACGGCCGCGTTTCGATATTCCGATGCTGTGGATCTTCGGATTCCTGTTCGTCTTCATTCTCGGCGGTCTGACCG
GCGTCATGCTCGCCATGGTGCCGTTCAACTGGCAGGCCCACGACACCCAATTCGTGACCGCGCATCTGCATTACGTACTG
GTCGGCGGCTTCATTTTTCCGCTGGTCGCGGCGCTCTACTACTGGCTGCCCCACATCTGCGGCCGGATTCCCGCGTTCAG
GCTTTCCATGCCCGCATTCTGGCTGGTCTTCATCGGGTTCAATGTGACCTTCTTCATGATGCACCTGACGGGCCTGCGCG
GCATGCCGCGGCGTGTCGACACCTATCCCGTGGAGGCAGGCTGGGACTGGCTCAACCTCACATCGTCGATCGGCGGCTTC
ATCCTGACGATGGGTTTCGCGCTCATCATCGTGGACGTGTTCCTGCAGATTCGCTACGGGCGGCGCTTCCGGCGAAACCC
GTGGAAGGCGCGGACGCTGGAGTGGGCGCAACCTATTCCTCCGCCCGCCTACAACTTCTTGTCCCTCCCGTGGATCGAAA
GACGCGCCGACACGCTCGAACCCGAGTCTATCGGTCCACAGCTTGCCGCCGGTCACGGCTATCTTGGTTTCGCGCGCAAC
GGATGGATGGAAACGCTGGGGGTCGACATAACGAGCGGACGGACGGATCACGTCATCGTGCTGCCGCGCCAGACCTACCT
GCCGTTATGGACGGCGCTTGCCGTGGCGACCTTCGTGCTCAGCCTCCTGTTCAGCTACTACTGGTTCTCGCTGCTGCCTC
TCGGCGTCGCCTTCATGCTCCTTCTTTGCTGGACGCGCGTGACCGGCCTCGACCGGGATAACGGTCCCGTGGTCATCGGC
CGGGAGGAGGTTGCACCGCTCCATTATGAAACGCACAGGCCGCCCTCCTGGTGGGGCATGATCATCACGCTCATCGCCGA
CGCGGCCTTCTATGGCTCGCTGGTATTCAGCCCGCTCTTTCTCTGGCTGACCGCGCCCGCATGGCCGCCTCCACAGACGC
TGAAGAGCGGCCTGGTTGTGCCTGCCCTGCTTGTGGCCGCCCTCGCCGCAGCGCCGCTATGCGCCCGGCGCGCGGTGGCG
CGCAACGCCAGAAGCCGCTCGCCTGTTCTCTGGCTGGGGGCGACCGCCGTCCTTCAATTCGCGTCGCTCATTCTGCTCGT
GATCCTGATGCGGACGAGCCTACCTGCGCCGACAGCGCACGCCTACAACGCTACGTCCTTCGCGCTGCTCGCCTACAGCG
CGTTGCATACCTTTCTCGCCACCGTGTTCTGCCTGTTCGGTCTCCGGCGCGTCCTGACAGGATACGTCTCGGCCAGGCGC
AGTCTCGACCTGCGGATCGCGACGCCGCTGCACGACTATACGGCTATCACGGGATTTGCCGGTATCGGGCTGGTCCTGCT
GCTGCCGGCCCTCATCACCGCGGGCGAGGCGTTCAGATGA

Upstream 100 bases:

>100_bases
TCTGCGGCGCAGGCCATTCCGCCATGCGGTTCACGGTTCTGGCCCATGAGCCCGAGGAGTTCGCCACGATCATGGCGGGC
GCGATTGAAGAGGCCAGGCG

Downstream 100 bases:

>100_bases
CCGGTGATCATCGCGCCTCGGCGAGCATGCTTGTCTGGATATGCTCCGGCTTTCTCGCATGGGGCGCGGCGTTCGCGGCC
TTGTATTCGGTGCAGGCTCT

Product: cytochrome c oxidase, subunit I

Products: NA

Alternate protein names: Cytochrome aa3 subunit 1-beta; Cytochrome c oxidase polypeptide I-beta [H]

Number of amino acids: Translated: 839; Mature: 838

Protein sequence:

>839_residues
MSGRVATPLRLHRQLNEIWASGRGVKRLAAVNHSVIGTRFMITAFIFFGIGGLLAMLIRAQLATSRSAFIGPDLYNQLFT
MHGTIMMFLFAIPMFEGMAIYLLPKLLGTRDLAFPRLGAFGYWCYLFGGAILIAAMLAGAAPDSGWFMYTPLSSSAFTPG
INADVWLLGITFVEISAVTAAVELVVSILKIRAPGMSLSRMPIFGWYVLVTAGMMVLGFPPLILGSVLLELERAFDLPFF
DTARGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTILPVFARRKLIGYRAVVVALVALAFLSFGLWVHHMFAVGIPHMA
LAFFSAASAAVTVPTAVQIFAWIATLAHGRPRFDIPMLWIFGFLFVFILGGLTGVMLAMVPFNWQAHDTQFVTAHLHYVL
VGGFIFPLVAALYYWLPHICGRIPAFRLSMPAFWLVFIGFNVTFFMMHLTGLRGMPRRVDTYPVEAGWDWLNLTSSIGGF
ILTMGFALIIVDVFLQIRYGRRFRRNPWKARTLEWAQPIPPPAYNFLSLPWIERRADTLEPESIGPQLAAGHGYLGFARN
GWMETLGVDITSGRTDHVIVLPRQTYLPLWTALAVATFVLSLLFSYYWFSLLPLGVAFMLLLCWTRVTGLDRDNGPVVIG
REEVAPLHYETHRPPSWWGMIITLIADAAFYGSLVFSPLFLWLTAPAWPPPQTLKSGLVVPALLVAALAAAPLCARRAVA
RNARSRSPVLWLGATAVLQFASLILLVILMRTSLPAPTAHAYNATSFALLAYSALHTFLATVFCLFGLRRVLTGYVSARR
SLDLRIATPLHDYTAITGFAGIGLVLLLPALITAGEAFR

Sequences:

>Translated_839_residues
MSGRVATPLRLHRQLNEIWASGRGVKRLAAVNHSVIGTRFMITAFIFFGIGGLLAMLIRAQLATSRSAFIGPDLYNQLFT
MHGTIMMFLFAIPMFEGMAIYLLPKLLGTRDLAFPRLGAFGYWCYLFGGAILIAAMLAGAAPDSGWFMYTPLSSSAFTPG
INADVWLLGITFVEISAVTAAVELVVSILKIRAPGMSLSRMPIFGWYVLVTAGMMVLGFPPLILGSVLLELERAFDLPFF
DTARGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTILPVFARRKLIGYRAVVVALVALAFLSFGLWVHHMFAVGIPHMA
LAFFSAASAAVTVPTAVQIFAWIATLAHGRPRFDIPMLWIFGFLFVFILGGLTGVMLAMVPFNWQAHDTQFVTAHLHYVL
VGGFIFPLVAALYYWLPHICGRIPAFRLSMPAFWLVFIGFNVTFFMMHLTGLRGMPRRVDTYPVEAGWDWLNLTSSIGGF
ILTMGFALIIVDVFLQIRYGRRFRRNPWKARTLEWAQPIPPPAYNFLSLPWIERRADTLEPESIGPQLAAGHGYLGFARN
GWMETLGVDITSGRTDHVIVLPRQTYLPLWTALAVATFVLSLLFSYYWFSLLPLGVAFMLLLCWTRVTGLDRDNGPVVIG
REEVAPLHYETHRPPSWWGMIITLIADAAFYGSLVFSPLFLWLTAPAWPPPQTLKSGLVVPALLVAALAAAPLCARRAVA
RNARSRSPVLWLGATAVLQFASLILLVILMRTSLPAPTAHAYNATSFALLAYSALHTFLATVFCLFGLRRVLTGYVSARR
SLDLRIATPLHDYTAITGFAGIGLVLLLPALITAGEAFR
>Mature_838_residues
SGRVATPLRLHRQLNEIWASGRGVKRLAAVNHSVIGTRFMITAFIFFGIGGLLAMLIRAQLATSRSAFIGPDLYNQLFTM
HGTIMMFLFAIPMFEGMAIYLLPKLLGTRDLAFPRLGAFGYWCYLFGGAILIAAMLAGAAPDSGWFMYTPLSSSAFTPGI
NADVWLLGITFVEISAVTAAVELVVSILKIRAPGMSLSRMPIFGWYVLVTAGMMVLGFPPLILGSVLLELERAFDLPFFD
TARGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTILPVFARRKLIGYRAVVVALVALAFLSFGLWVHHMFAVGIPHMAL
AFFSAASAAVTVPTAVQIFAWIATLAHGRPRFDIPMLWIFGFLFVFILGGLTGVMLAMVPFNWQAHDTQFVTAHLHYVLV
GGFIFPLVAALYYWLPHICGRIPAFRLSMPAFWLVFIGFNVTFFMMHLTGLRGMPRRVDTYPVEAGWDWLNLTSSIGGFI
LTMGFALIIVDVFLQIRYGRRFRRNPWKARTLEWAQPIPPPAYNFLSLPWIERRADTLEPESIGPQLAAGHGYLGFARNG
WMETLGVDITSGRTDHVIVLPRQTYLPLWTALAVATFVLSLLFSYYWFSLLPLGVAFMLLLCWTRVTGLDRDNGPVVIGR
EEVAPLHYETHRPPSWWGMIITLIADAAFYGSLVFSPLFLWLTAPAWPPPQTLKSGLVVPALLVAALAAAPLCARRAVAR
NARSRSPVLWLGATAVLQFASLILLVILMRTSLPAPTAHAYNATSFALLAYSALHTFLATVFCLFGLRRVLTGYVSARRS
LDLRIATPLHDYTAITGFAGIGLVLLLPALITAGEAFR

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

Organism=Homo sapiens, GI251831109, Length=503, Percent_Identity=35.1888667992048, Blast_Score=305, Evalue=1e-82,
Organism=Escherichia coli, GI1786634, Length=525, Percent_Identity=33.9047619047619, Blast_Score=326, Evalue=4e-90,
Organism=Saccharomyces cerevisiae, GI6226519, Length=530, Percent_Identity=35.4716981132075, Blast_Score=324, Evalue=4e-89,
Organism=Saccharomyces cerevisiae, GI6226524, Length=302, Percent_Identity=33.7748344370861, Blast_Score=200, Evalue=8e-52,
Organism=Saccharomyces cerevisiae, GI6226523, Length=226, Percent_Identity=32.3008849557522, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883
- InterPro:   IPR014241 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 92668; Mature: 92537

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB ; PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRVATPLRLHRQLNEIWASGRGVKRLAAVNHSVIGTRFMITAFIFFGIGGLLAMLIRA
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLATSRSAFIGPDLYNQLFTMHGTIMMFLFAIPMFEGMAIYLLPKLLGTRDLAFPRLGAF
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHH
GYWCYLFGGAILIAAMLAGAAPDSGWFMYTPLSSSAFTPGINADVWLLGITFVEISAVTA
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
AVELVVSILKIRAPGMSLSRMPIFGWYVLVTAGMMVLGFPPLILGSVLLELERAFDLPFF
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
DTARGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTILPVFARRKLIGYRAVVVALVALA
CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSFGLWVHHMFAVGIPHMALAFFSAASAAVTVPTAVQIFAWIATLAHGRPRFDIPMLWI
HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHH
FGFLFVFILGGLTGVMLAMVPFNWQAHDTQFVTAHLHYVLVGGFIFPLVAALYYWLPHIC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRIPAFRLSMPAFWLVFIGFNVTFFMMHLTGLRGMPRRVDTYPVEAGWDWLNLTSSIGGF
CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ILTMGFALIIVDVFLQIRYGRRFRRNPWKARTLEWAQPIPPPAYNFLSLPWIERRADTLE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
PESIGPQLAAGHGYLGFARNGWMETLGVDITSGRTDHVIVLPRQTYLPLWTALAVATFVL
CHHCCCCCCCCCCCCCCCCCCCHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHH
SLLFSYYWFSLLPLGVAFMLLLCWTRVTGLDRDNGPVVIGREEVAPLHYETHRPPSWWGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHH
IITLIADAAFYGSLVFSPLFLWLTAPAWPPPQTLKSGLVVPALLVAALAAAPLCARRAVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RNARSRSPVLWLGATAVLQFASLILLVILMRTSLPAPTAHAYNATSFALLAYSALHTFLA
HCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TVFCLFGLRRVLTGYVSARRSLDLRIATPLHDYTAITGFAGIGLVLLLPALITAGEAFR
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SGRVATPLRLHRQLNEIWASGRGVKRLAAVNHSVIGTRFMITAFIFFGIGGLLAMLIRA
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLATSRSAFIGPDLYNQLFTMHGTIMMFLFAIPMFEGMAIYLLPKLLGTRDLAFPRLGAF
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHH
GYWCYLFGGAILIAAMLAGAAPDSGWFMYTPLSSSAFTPGINADVWLLGITFVEISAVTA
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
AVELVVSILKIRAPGMSLSRMPIFGWYVLVTAGMMVLGFPPLILGSVLLELERAFDLPFF
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
DTARGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTILPVFARRKLIGYRAVVVALVALA
CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSFGLWVHHMFAVGIPHMALAFFSAASAAVTVPTAVQIFAWIATLAHGRPRFDIPMLWI
HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHH
FGFLFVFILGGLTGVMLAMVPFNWQAHDTQFVTAHLHYVLVGGFIFPLVAALYYWLPHIC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRIPAFRLSMPAFWLVFIGFNVTFFMMHLTGLRGMPRRVDTYPVEAGWDWLNLTSSIGGF
CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ILTMGFALIIVDVFLQIRYGRRFRRNPWKARTLEWAQPIPPPAYNFLSLPWIERRADTLE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
PESIGPQLAAGHGYLGFARNGWMETLGVDITSGRTDHVIVLPRQTYLPLWTALAVATFVL
CHHCCCCCCCCCCCCCCCCCCCHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHH
SLLFSYYWFSLLPLGVAFMLLLCWTRVTGLDRDNGPVVIGREEVAPLHYETHRPPSWWGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHH
IITLIADAAFYGSLVFSPLFLWLTAPAWPPPQTLKSGLVVPALLVAALAAAPLCARRAVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RNARSRSPVLWLGATAVLQFASLILLVILMRTSLPAPTAHAYNATSFALLAYSALHTFLA
HCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TVFCLFGLRRVLTGYVSARRSLDLRIATPLHDYTAITGFAGIGLVLLLPALITAGEAFR
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]