| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is mutA [H]
Identifier: 75676421
GI number: 75676421
Start: 2430469
End: 2432388
Strand: Direct
Name: mutA [H]
Synonym: Nwi_2236
Alternate gene names: 75676421
Gene position: 2430469-2432388 (Clockwise)
Preceding gene: 75676420
Following gene: 75676422
Centisome position: 71.44
GC content: 66.93
Gene sequence:
>1920_bases ATGCCCGCTGCTCCCCATGAACCCATCGATCCGCCGTTGGCAGCCGATTTCGCACCGGCGCTCGCGGCCGACTGGCGCAA GCTGGTCGATGGCGTGCTGAAGGGCGCGCCCTTCGAGAGGCTGGTGGGAAAGACCTATGACGGTCTCCGGATCGAACCGA TCTACACGCGCGCGGAAGGTGCCCCCCCGATCGCCGGCCGCGCCGCGGCCACGCCATGGCGGATCATGCAGCGGATCGAT CATCCCGAGCCCGCGCAGGCCAACGCGCAGGCGCTGCACGACCTCGATAACGGCGCCGGCGGCCTGACCCTGGTGTTCGC GGGGGCCAACGGCGCGCGCGGTTTCGGGCTGCCGCCGACCGCCAAGGCTGTCGCCAGAGTGCTGGACGGCGTCTTTCTCG ATGCAGGCATCACCATCGAGTTGCACATCGCCCCGCAATCGCTCGGGGTCGCTTTCCAGATCGCAGACCACATCAGGACA AAAGGAATAGACCCGGCCGCCTGCGATATCCATTTCGGTCTCGATCCGCTCGGTGCCTGCGCGACATCCGGATCCAGCAC CAACGAATGGGCTGAGATCGTTGCGGCCGCGACGGAGACCGCGAAGACGCTCGCCGCCCGAGGCTTCAAGGGGCCGTTCC TTGTCGCCGACGGCCGCGTGATCCACGACGCCGGCGGATCGGAGGCTCAGGAACTCGCCTTCGTCCTTGCGTCGGCGGTC ACATATCTCCGCGCGCTCGAAAGCGCCGGCGTCGTTCTCGATGACGCGCGCGGCATGATCCACGCGCGGCTCAGCACTGA TGCCGACCAGTTCCTGACGCTGGCCAAATTCCGCGCTCTGCGGCTGTTGTGGGCACGGGTCGAGCAGGCCTGCGGCCTCG CGCCGAGGCCATTGCTGATTGCCGCCGAGACCTCGTGGCGGATGCTGACCCGGCGCGATCCCTACATGAATATGCTGCGC GCCACCGTCGCGGCATTCTCGGCGGGCCTCGGCGGCGCTGACAGCGTCTGCGTGCTTCCGCATACGCAGGCATTGGGCCT GCCGGACGGCTTCGCGCGACGCATGGCGCGAAACACGCAGCTCATCCTGCTGGAGGAAGCCAACCTCGCCAAAGTCGCGG ATCCGGCGGCAGGCTCTGGTGGCATCGAGACCTTGACGCGCGAGCTTTGTCAAAAGAGCTGGGCGCTGTTTCAGGATACC GAGAGAGCGGGTGGAGCGTTCGCCGCGCTCGAACAGAACCTGATCCAGCGCGGCGTCGCCGCGACGCGCGACGCGCGCCA GACCAGTGTCGCCAAACGGCGCGACGTGCTCACCGGCATCAGCGAATTTCCCGACCTGCACGAAACGCCGATCGACGTGC TCGATGTGGAGCCTGTCACGCTCGCGCCCTCCGGCGAGGCAAAAATCAGCTTCGAGGCGCTGACGCCGATACGGCTGGCC GCCCCCTTCGAACAACTGCGCGATCATTCCGACGATTGGCTCAAGGCCACCGGCGCGCGGCCGAAGATCCTGCTCGCCAC TCTCGGCGTCCCTGCCGGCTTCGCCGCGCGCGCGGCCTTTGCCAGAAGTTTTTTCGAGGCCGGCGGCATCGAGGCCGTCG ATCCGCCCTCCCCCCGCTCGCGGCAGGGAGATGTCGAAGGCGCCGCTCGGCGAGAAGATGAAAACGCGCTCGCCGAAGCC TTCAAGGCATCCGGCGCTCGAATGGTCTGCCTTTGCTCCTCGGATGAGGTCTATGCCGAACAGGCGGTGCTTGCAGCGCG GGCCTTTCATGCCGCCGGTGCAGGCCATATCTATCTGGCGGGACGACCGAATGAACTGGAACCTGTGTTGCGCCAGGCAG GCGTGCGCGATTTCATCTTCGCGGGGAACGATGCGTTGGCGGTGCTGAACGAGGTCTGGCAGCGACTGGAGCAACCATGA
Upstream 100 bases:
>100_bases GCCTCCCCGACCTTCCCTGATCGCGCGCAAACGACCGTTTGGCTTGTCCGCCGCTGCGTGGCATTTTGAGAATCCGGATT CTGCCGGACACGAGCGAACA
Downstream 100 bases:
>100_bases CAGAGCAGATGAGCCCGTCGCTGACCGGCGGATGCCAATGCGGCGCCATTCGTTTCGCGCTGACGGCCCCGCCGGTGCGC ATCAGCATCTGCCACTGCCG
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MPAAPHEPIDPPLAADFAPALAADWRKLVDGVLKGAPFERLVGKTYDGLRIEPIYTRAEGAPPIAGRAAATPWRIMQRID HPEPAQANAQALHDLDNGAGGLTLVFAGANGARGFGLPPTAKAVARVLDGVFLDAGITIELHIAPQSLGVAFQIADHIRT KGIDPAACDIHFGLDPLGACATSGSSTNEWAEIVAAATETAKTLAARGFKGPFLVADGRVIHDAGGSEAQELAFVLASAV TYLRALESAGVVLDDARGMIHARLSTDADQFLTLAKFRALRLLWARVEQACGLAPRPLLIAAETSWRMLTRRDPYMNMLR ATVAAFSAGLGGADSVCVLPHTQALGLPDGFARRMARNTQLILLEEANLAKVADPAAGSGGIETLTRELCQKSWALFQDT ERAGGAFAALEQNLIQRGVAATRDARQTSVAKRRDVLTGISEFPDLHETPIDVLDVEPVTLAPSGEAKISFEALTPIRLA APFEQLRDHSDDWLKATGARPKILLATLGVPAGFAARAAFARSFFEAGGIEAVDPPSPRSRQGDVEGAARREDENALAEA FKASGARMVCLCSSDEVYAEQAVLAARAFHAAGAGHIYLAGRPNELEPVLRQAGVRDFIFAGNDALAVLNEVWQRLEQP
Sequences:
>Translated_639_residues MPAAPHEPIDPPLAADFAPALAADWRKLVDGVLKGAPFERLVGKTYDGLRIEPIYTRAEGAPPIAGRAAATPWRIMQRID HPEPAQANAQALHDLDNGAGGLTLVFAGANGARGFGLPPTAKAVARVLDGVFLDAGITIELHIAPQSLGVAFQIADHIRT KGIDPAACDIHFGLDPLGACATSGSSTNEWAEIVAAATETAKTLAARGFKGPFLVADGRVIHDAGGSEAQELAFVLASAV TYLRALESAGVVLDDARGMIHARLSTDADQFLTLAKFRALRLLWARVEQACGLAPRPLLIAAETSWRMLTRRDPYMNMLR ATVAAFSAGLGGADSVCVLPHTQALGLPDGFARRMARNTQLILLEEANLAKVADPAAGSGGIETLTRELCQKSWALFQDT ERAGGAFAALEQNLIQRGVAATRDARQTSVAKRRDVLTGISEFPDLHETPIDVLDVEPVTLAPSGEAKISFEALTPIRLA APFEQLRDHSDDWLKATGARPKILLATLGVPAGFAARAAFARSFFEAGGIEAVDPPSPRSRQGDVEGAARREDENALAEA FKASGARMVCLCSSDEVYAEQAVLAARAFHAAGAGHIYLAGRPNELEPVLRQAGVRDFIFAGNDALAVLNEVWQRLEQP >Mature_638_residues PAAPHEPIDPPLAADFAPALAADWRKLVDGVLKGAPFERLVGKTYDGLRIEPIYTRAEGAPPIAGRAAATPWRIMQRIDH PEPAQANAQALHDLDNGAGGLTLVFAGANGARGFGLPPTAKAVARVLDGVFLDAGITIELHIAPQSLGVAFQIADHIRTK GIDPAACDIHFGLDPLGACATSGSSTNEWAEIVAAATETAKTLAARGFKGPFLVADGRVIHDAGGSEAQELAFVLASAVT YLRALESAGVVLDDARGMIHARLSTDADQFLTLAKFRALRLLWARVEQACGLAPRPLLIAAETSWRMLTRRDPYMNMLRA TVAAFSAGLGGADSVCVLPHTQALGLPDGFARRMARNTQLILLEEANLAKVADPAAGSGGIETLTRELCQKSWALFQDTE RAGGAFAALEQNLIQRGVAATRDARQTSVAKRRDVLTGISEFPDLHETPIDVLDVEPVTLAPSGEAKISFEALTPIRLAA PFEQLRDHSDDWLKATGARPKILLATLGVPAGFAARAAFARSFFEAGGIEAVDPPSPRSRQGDVEGAARREDENALAEAF KASGARMVCLCSSDEVYAEQAVLAARAFHAAGAGHIYLAGRPNELEPVLRQAGVRDFIFAGNDALAVLNEVWQRLEQP
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=478, Percent_Identity=26.1506276150628, Blast_Score=119, Evalue=1e-26, Organism=Escherichia coli, GI1789284, Length=485, Percent_Identity=27.8350515463918, Blast_Score=158, Evalue=8e-40, Organism=Caenorhabditis elegans, GI25144500, Length=257, Percent_Identity=28.7937743190661, Blast_Score=128, Evalue=8e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 67731; Mature: 67599
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAPHEPIDPPLAADFAPALAADWRKLVDGVLKGAPFERLVGKTYDGLRIEPIYTRAEG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEECCCC APPIAGRAAATPWRIMQRIDHPEPAQANAQALHDLDNGAGGLTLVFAGANGARGFGLPPT CCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHH AKAVARVLDGVFLDAGITIELHIAPQSLGVAFQIADHIRTKGIDPAACDIHFGLDPLGAC HHHHHHHHCCCEECCCCEEEEEECCHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHH ATSGSSTNEWAEIVAAATETAKTLAARGFKGPFLVADGRVIHDAGGSEAQELAFVLASAV HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHH TYLRALESAGVVLDDARGMIHARLSTDADQFLTLAKFRALRLLWARVEQACGLAPRPLLI HHHHHHHHCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE AAETSWRMLTRRDPYMNMLRATVAAFSAGLGGADSVCVLPHTQALGLPDGFARRMARNTQ EECCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCE LILLEEANLAKVADPAAGSGGIETLTRELCQKSWALFQDTERAGGAFAALEQNLIQRGVA EEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ATRDARQTSVAKRRDVLTGISEFPDLHETPIDVLDVEPVTLAPSGEAKISFEALTPIRLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEECCCCCCEEEEEECCCCHHH APFEQLRDHSDDWLKATGARPKILLATLGVPAGFAARAAFARSFFEAGGIEAVDPPSPRS CCHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC RQGDVEGAARREDENALAEAFKASGARMVCLCSSDEVYAEQAVLAARAFHAAGAGHIYLA CCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEC GRPNELEPVLRQAGVRDFIFAGNDALAVLNEVWQRLEQP CCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC >Mature Secondary Structure PAAPHEPIDPPLAADFAPALAADWRKLVDGVLKGAPFERLVGKTYDGLRIEPIYTRAEG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEECCCC APPIAGRAAATPWRIMQRIDHPEPAQANAQALHDLDNGAGGLTLVFAGANGARGFGLPPT CCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHH AKAVARVLDGVFLDAGITIELHIAPQSLGVAFQIADHIRTKGIDPAACDIHFGLDPLGAC HHHHHHHHCCCEECCCCEEEEEECCHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHH ATSGSSTNEWAEIVAAATETAKTLAARGFKGPFLVADGRVIHDAGGSEAQELAFVLASAV HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHH TYLRALESAGVVLDDARGMIHARLSTDADQFLTLAKFRALRLLWARVEQACGLAPRPLLI HHHHHHHHCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE AAETSWRMLTRRDPYMNMLRATVAAFSAGLGGADSVCVLPHTQALGLPDGFARRMARNTQ EECCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCE LILLEEANLAKVADPAAGSGGIETLTRELCQKSWALFQDTERAGGAFAALEQNLIQRGVA EEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ATRDARQTSVAKRRDVLTGISEFPDLHETPIDVLDVEPVTLAPSGEAKISFEALTPIRLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEECCCCCCEEEEEECCCCHHH APFEQLRDHSDDWLKATGARPKILLATLGVPAGFAARAAFARSFFEAGGIEAVDPPSPRS CCHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC RQGDVEGAARREDENALAEAFKASGARMVCLCSSDEVYAEQAVLAARAFHAAGAGHIYLA CCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEC GRPNELEPVLRQAGVRDFIFAGNDALAVLNEVWQRLEQP CCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]