Click here to switch to the map view.

The map label for this gene is hspH [H]

Identifier: 75676303

GI number: 75676303

Start: 2313173

End: 2313637

Strand: Direct

Name: hspH [H]

Synonym: Nwi_2117

Alternate gene names: 75676303

Gene position: 2313173-2313637 (Clockwise)

Preceding gene: 75676302

Following gene: 75676304

Centisome position: 67.99

GC content: 61.72

Gene sequence:

>465_bases
ATGAGAGACTTCGATCTCACACCCATCTGGCGATCGACCGTCGGTTTTGATCGCCTCGTCGATCTCATCGACGATTCGCT
TCGGTTGGCGGGCGAGGACAATTACCCGCCCTACAACATCGCGCGGACCGGTGAGGACAACTATCGCATCTCGCTGGCTC
TGGCTGGCTTCAAGCCGGAGGAGATCACCGTCACGGCGGAGCAGAACATGCTTACCGTGGAAGGCCGCAAGGCCGAGAAG
GATGATCGCGAGTACCTCTACCAGGGCATCTCCGGGCGTCCGTTCCGGCGCCAGTTCAACCTCGCCGACTACGTCGAGGT
GAAGGGCGCCTCGTTCGAGGACGGGCTCCTGCAGGTCGACCTGGTGCGCGAATTGCCGGAGGCCATGAAGCCGCGCCGGA
TCGCGATCAAATCCGGTCCTTTCCGCAGCGAGACCCAACAAATCGAGCAGAAGCAAGCGGCCTGA

Upstream 100 bases:

>100_bases
CGCAAATCGCCGATCGCCCCGTCGGGGATCGGCAAAGTCCAAAGGGGCGTCGGCTCTTTGGGCGCCCCTCGTACCATGTT
GCTCAATGGAGGATGTGGCT

Downstream 100 bases:

>100_bases
TCGTAAGTCCGATCGGGCCGGCTGGAGGTGGTCGCGTGTGGCCTTGGCCACGCGCGCCCCCGTTTGAGATAGGAGGCACA
ACATGAGCATGAGAGATCTC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRDFDLTPIWRSTVGFDRLVDLIDDSLRLAGEDNYPPYNIARTGEDNYRISLALAGFKPEEITVTAEQNMLTVEGRKAEK
DDREYLYQGISGRPFRRQFNLADYVEVKGASFEDGLLQVDLVRELPEAMKPRRIAIKSGPFRSETQQIEQKQAA

Sequences:

>Translated_154_residues
MRDFDLTPIWRSTVGFDRLVDLIDDSLRLAGEDNYPPYNIARTGEDNYRISLALAGFKPEEITVTAEQNMLTVEGRKAEK
DDREYLYQGISGRPFRRQFNLADYVEVKGASFEDGLLQVDLVRELPEAMKPRRIAIKSGPFRSETQQIEQKQAA
>Mature_154_residues
MRDFDLTPIWRSTVGFDRLVDLIDDSLRLAGEDNYPPYNIARTGEDNYRISLALAGFKPEEITVTAEQNMLTVEGRKAEK
DDREYLYQGISGRPFRRQFNLADYVEVKGASFEDGLLQVDLVRELPEAMKPRRIAIKSGPFRSETQQIEQKQAA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=138, Percent_Identity=47.8260869565217, Blast_Score=140, Evalue=3e-35,
Organism=Escherichia coli, GI87082316, Length=142, Percent_Identity=42.9577464788732, Blast_Score=126, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17660; Mature: 17660

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFDLTPIWRSTVGFDRLVDLIDDSLRLAGEDNYPPYNIARTGEDNYRISLALAGFKPE
CCCCCCCCHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCEEEEEEEECCCCC
EITVTAEQNMLTVEGRKAEKDDREYLYQGISGRPFRRQFNLADYVEVKGASFEDGLLQVD
EEEEEECCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEHH
LVRELPEAMKPRRIAIKSGPFRSETQQIEQKQAA
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRDFDLTPIWRSTVGFDRLVDLIDDSLRLAGEDNYPPYNIARTGEDNYRISLALAGFKPE
CCCCCCCCHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCEEEEEEEECCCCC
EITVTAEQNMLTVEGRKAEKDDREYLYQGISGRPFRRQFNLADYVEVKGASFEDGLLQVD
EEEEEECCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEHH
LVRELPEAMKPRRIAIKSGPFRSETQQIEQKQAA
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]