| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75676294
Identifier: 75676294
GI number: 75676294
Start: 2303280
End: 2303963
Strand: Direct
Name: 75676294
Synonym: Nwi_2108
Alternate gene names: NA
Gene position: 2303280-2303963 (Clockwise)
Preceding gene: 75676293
Following gene: 75676295
Centisome position: 67.7
GC content: 58.33
Gene sequence:
>684_bases GTGGGAGTTCGTTCACGCTGTGAAGCTCAGTTACAAAAAAAGACGCTGATTGCTGCAGAGCAGGATCGTCCCGATGTCGC CCGTCGGCGAGCGCAATGGACCAAGTATCGAGATCGGATTGATCCCACTCGGCTGGTGTTCATCGATGAGACCTGGACCA AAACCAATATGGCGCCGCTGCGGGGCTGGGCGCCGCGCGGTCAACGCATCAGAGCCAAGGTGCCGCATGGCCGCTGGCAG ACCATGACCTTTATGGCCGCTCTGCGCCACGATCGCATCACCGCGCCGTGGTTCATCGAGGGGCCGATCAACGGCGAAGC CTTCCTTCTCTACATCGAGAAGGTTCTGGTCCCGACCCTGCGGCACGGCGACATCGTCATTATGGACAACCTCGGCTCGC ACAAGGCCAGCGCCGTGCGTCGCGTCATCCGTGCCGCCGGTGCCCGGCTCTTCTACCTGCCGAAATACTCGCCTGATCTG AACCCGATCGAGCAGTTCTTTGCCAAGTTCAAACACTGGCTACGCAAAGCCGCGCAGCGGACCACCGAGGCCGTCTACAA TGCTATCGCTCCGATCCTCGAAACCGTTGCACCGGCTGAATGCGCCAACTACTTCGTCAATGCAGCCCACTCATCCATTT TCAGTTATCGTAACGCGTTGAATTTCCAACACAACTTTTTTTGA
Upstream 100 bases:
>100_bases ACCGCGAATGGCTGCTGCAACGGTGCCGAAAGGACTTTACCGTGCGCGGGCTGGTGGCCGAACTTGCCGAGCGTGGCCTT AAGGTCGATTACCGCACGAT
Downstream 100 bases:
>100_bases TCGCACGTCGCGATCCGAACTGCGAACCGACAAAAATTCTTGGTGCTGATTTTCGAGGAGGAATCGCGCGATTCCGATTC AATGACGTTTCAGGGACTAT
Product: transposase for insertion sequence element ISRM11/ISRM2011-2
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; LOW QUALITY PROTEIN Transposase; Transposase IS; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPLRGWAPRGQRIRAKVPHGRWQ TMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTLRHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDL NPIEQFFAKFKHWLRKAAQRTTEAVYNAIAPILETVAPAECANYFVNAAHSSIFSYRNALNFQHNFF
Sequences:
>Translated_227_residues MGVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPLRGWAPRGQRIRAKVPHGRWQ TMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTLRHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDL NPIEQFFAKFKHWLRKAAQRTTEAVYNAIAPILETVAPAECANYFVNAAHSSIFSYRNALNFQHNFF >Mature_226_residues GVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPLRGWAPRGQRIRAKVPHGRWQT MTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTLRHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDLN PIEQFFAKFKHWLRKAAQRTTEAVYNAIAPILETVAPAECANYFVNAAHSSIFSYRNALNFQHNFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26252; Mature: 26120
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPL CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC RGWAPRGQRIRAKVPHGRWQTMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHC RHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDLNPIEQFFAKFKHWLRKAAQR CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH TTEAVYNAIAPILETVAPAECANYFVNAAHSSIFSYRNALNFQHNFF HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPL CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC RGWAPRGQRIRAKVPHGRWQTMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHC RHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDLNPIEQFFAKFKHWLRKAAQR CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH TTEAVYNAIAPILETVAPAECANYFVNAAHSSIFSYRNALNFQHNFF HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA