| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676295
Identifier: 75676295
GI number: 75676295
Start: 2304572
End: 2305747
Strand: Direct
Name: 75676295
Synonym: Nwi_2109
Alternate gene names: NA
Gene position: 2304572-2305747 (Clockwise)
Preceding gene: 75676294
Following gene: 75676296
Centisome position: 67.74
GC content: 60.54
Gene sequence:
>1176_bases ATGCCGAAGCGCACAACAGGCCGATATGAAAGTGTGACCGCCGGCGGCGAAAAGGTCGATGCCTTCGTTCCTTTCGATCT GCCGCCCGCGCGGCCGTCGCTCGCCATCGACGCCAAATTTGAACGCCGCCTCGGGCAAGCCGAGCAGGCGCTTGTCCGGC TCGATCTGGCGAGCGAGATGGTGCCTTCGCTCGATTGGTTCATCTACGCATTCGTGCGCAAAGAGGCGGTTATCACGTCT CAGATCGAGGGTACACAGGCATCGCTCGTGGACCTTCTGGCCTTCGAAGCCGAGGAGCAGCCCTCACCCAACGCAGATGT CGAGGAGGTCACGAACTACCTCGACGCCCTCACCTACGCGCGAACCCAACTCGGGTCGAAGCGCGGTCTGCCAATCTCGC TGCGGCTCTTGAACGAAGCCCACAAGCGGCTGATGCGCGGTGGGCGCGGAGCAAGCAAGCAACCTGGAGAAATCCGCCGC AGCCAGAACTGGATTGGCGGGAGCCGCCCGGGGAACGCAGTCTACGTTCCCCCGCCCTCCGACAAGCTTCCAAAGCTCCT CGGCGCATTCGAGAAATACATTCATGCCGAGGACCGGCTGCCGAAACTCGTGCGGACTGCTCTTCTGCATGCTCAGTTCG AATCCATTCACCCCTATCTTGATGGCAACGGGCGGATCGGGCGCCTGATGATCGCCCTGCTGCTGGAGCACTGGGGCTTA TTGAAGCAGCCGCTTCTCTATCTCAGCCTTTTCTTTAAACGCCATCGCGAAGAGTATTACCGGCGCCTCAACCTTGTGCG TCTGGAAGGCGACTGGGAAGGTTGGACCGATTTCTTTCTCGATGGCGTCGCCACGATCGCCGACGAAGCCGTTGCATCGG CGCGCGAATTGTTCAACCTCGTGAGCACGGATCGCACGCGGCTGCTTGGTGTTGAATCAGCATCGGTCTCTGCCTTCCGA TTGTTCGAGCTACTTCCCCGTCATCCGATCGTGAGCGTCGCATCGGCCATGAGGCTGCTCGGCACCAGCAAGCCGACTGC TACCCGTGCAATCGAGGTGCTGACCGAGATCGGCATCCTCGTAGAAACGACAGGAAAGAAGCGCGACCGCAGCTTTGCTT ATCGCGCCTATATGGAGCGCCTGCGAACCGGAACTGAGCTCGACCTTAGCCGCTGA
Upstream 100 bases:
>100_bases GACTAGTAAAGAGTCCGTTCTTAGTTATGCTGACAGGGAACGTGGGCGTTCCTTGTATGCGGCCCTTGGAACGACGACGT CCCTGAGTCAGCCACCGGAT
Downstream 100 bases:
>100_bases GCGCTGCGGTTCTGCATTAACATGCGTTAAAAATTGCCAGTTCAGAGCCGCGGCCCCGCAACCAGGGCGCTGGCCAATAT CGGAAACAACCCACAATACC
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MPKRTTGRYESVTAGGEKVDAFVPFDLPPARPSLAIDAKFERRLGQAEQALVRLDLASEMVPSLDWFIYAFVRKEAVITS QIEGTQASLVDLLAFEAEEQPSPNADVEEVTNYLDALTYARTQLGSKRGLPISLRLLNEAHKRLMRGGRGASKQPGEIRR SQNWIGGSRPGNAVYVPPPSDKLPKLLGAFEKYIHAEDRLPKLVRTALLHAQFESIHPYLDGNGRIGRLMIALLLEHWGL LKQPLLYLSLFFKRHREEYYRRLNLVRLEGDWEGWTDFFLDGVATIADEAVASARELFNLVSTDRTRLLGVESASVSAFR LFELLPRHPIVSVASAMRLLGTSKPTATRAIEVLTEIGILVETTGKKRDRSFAYRAYMERLRTGTELDLSR
Sequences:
>Translated_391_residues MPKRTTGRYESVTAGGEKVDAFVPFDLPPARPSLAIDAKFERRLGQAEQALVRLDLASEMVPSLDWFIYAFVRKEAVITS QIEGTQASLVDLLAFEAEEQPSPNADVEEVTNYLDALTYARTQLGSKRGLPISLRLLNEAHKRLMRGGRGASKQPGEIRR SQNWIGGSRPGNAVYVPPPSDKLPKLLGAFEKYIHAEDRLPKLVRTALLHAQFESIHPYLDGNGRIGRLMIALLLEHWGL LKQPLLYLSLFFKRHREEYYRRLNLVRLEGDWEGWTDFFLDGVATIADEAVASARELFNLVSTDRTRLLGVESASVSAFR LFELLPRHPIVSVASAMRLLGTSKPTATRAIEVLTEIGILVETTGKKRDRSFAYRAYMERLRTGTELDLSR >Mature_390_residues PKRTTGRYESVTAGGEKVDAFVPFDLPPARPSLAIDAKFERRLGQAEQALVRLDLASEMVPSLDWFIYAFVRKEAVITSQ IEGTQASLVDLLAFEAEEQPSPNADVEEVTNYLDALTYARTQLGSKRGLPISLRLLNEAHKRLMRGGRGASKQPGEIRRS QNWIGGSRPGNAVYVPPPSDKLPKLLGAFEKYIHAEDRLPKLVRTALLHAQFESIHPYLDGNGRIGRLMIALLLEHWGLL KQPLLYLSLFFKRHREEYYRRLNLVRLEGDWEGWTDFFLDGVATIADEAVASARELFNLVSTDRTRLLGVESASVSAFRL FELLPRHPIVSVASAMRLLGTSKPTATRAIEVLTEIGILVETTGKKRDRSFAYRAYMERLRTGTELDLSR
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
Organism=Drosophila melanogaster, GI24582217, Length=175, Percent_Identity=30.2857142857143, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 43975; Mature: 43844
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRTTGRYESVTAGGEKVDAFVPFDLPPARPSLAIDAKFERRLGQAEQALVRLDLASEM CCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCEEECHHHHHHHCHHHHHHHHHHHHHHH VPSLDWFIYAFVRKEAVITSQIEGTQASLVDLLAFEAEEQPSPNADVEEVTNYLDALTYA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RTQLGSKRGLPISLRLLNEAHKRLMRGGRGASKQPGEIRRSQNWIGGSRPGNAVYVPPPS HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCC DKLPKLLGAFEKYIHAEDRLPKLVRTALLHAQFESIHPYLDGNGRIGRLMIALLLEHWGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHH LKQPLLYLSLFFKRHREEYYRRLNLVRLEGDWEGWTDFFLDGVATIADEAVASARELFNL HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSTDRTRLLGVESASVSAFRLFELLPRHPIVSVASAMRLLGTSKPTATRAIEVLTEIGIL HHCCCHHEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCE VETTGKKRDRSFAYRAYMERLRTGTELDLSR EECCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PKRTTGRYESVTAGGEKVDAFVPFDLPPARPSLAIDAKFERRLGQAEQALVRLDLASEM CCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCEEECHHHHHHHCHHHHHHHHHHHHHHH VPSLDWFIYAFVRKEAVITSQIEGTQASLVDLLAFEAEEQPSPNADVEEVTNYLDALTYA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RTQLGSKRGLPISLRLLNEAHKRLMRGGRGASKQPGEIRRSQNWIGGSRPGNAVYVPPPS HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCC DKLPKLLGAFEKYIHAEDRLPKLVRTALLHAQFESIHPYLDGNGRIGRLMIALLLEHWGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHH LKQPLLYLSLFFKRHREEYYRRLNLVRLEGDWEGWTDFFLDGVATIADEAVASARELFNL HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSTDRTRLLGVESASVSAFRLFELLPRHPIVSVASAMRLLGTSKPTATRAIEVLTEIGIL HHCCCHHEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCE VETTGKKRDRSFAYRAYMERLRTGTELDLSR EECCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]