| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676268
Identifier: 75676268
GI number: 75676268
Start: 2278800
End: 2280032
Strand: Direct
Name: 75676268
Synonym: Nwi_2079
Alternate gene names: NA
Gene position: 2278800-2280032 (Clockwise)
Preceding gene: 75676267
Following gene: 75676269
Centisome position: 66.98
GC content: 61.8
Gene sequence:
>1233_bases ATGACCGAATCTTCCGCCCAAGTCGTTCTCGGCGAGAGCTTGACGCCCATCGGTCAATTGCGTTTCACGCAGACTGGGCC GCGTCAGTTTTCAACCTTCTCGTACGATCCGGCGTGGATCAAGGATCCCCGCGCCTTCACCTTGCAGCCCGACATGCCGT TTGAGGGCGGACCATTTCATGCGTCGGCGCAGCCAGGCAATCCGCGTGACGCGCTCGCCGGCGCCTTCTCCGATGCGGCA CCCGACAGCTGGGGCCGCAGACTTCTGGAACGCGCTTACGGCAAGGGTCTATCCGAGTTCGAGTACCTGACCCTGTCCGA CGACACCTGCCGGCAGGGTGCGCTACGCTTTCTTGATGATCAGGGGAAGGTCATCACCGGCAAATCTGTCGAGGCGGTGC CGCGCTTGCTCGACCTGCAAGCGATCACCGCGATCGCCCGCGCCTACGAGCAGGGCAAGGATATTTCGGCCGAAGACATG CAAGCCCTCGCCGGCGCGGGCGGCTCGGGTGGAGGCCGGCCCAAAGCCAATGTCCGTGACGAACATGTGCTCTGGTTGGC GAAATTCACCTCCATCCACGATCAGCACCCGATCGAGCAGATCGAGGTCGCCACTCTCACCCTCGCCAAGGCGTGCGGCA TTCGGACGCCCGAAGTCAGGTTGGAGCTTGCCGATACGCCCTTCCCTGTCGCGCTCATCCAGCGCTTCGACCGACGCGGC AGCGCGCGCATCCCCTATATCTCGGCACGAACGGCGCTTGGGAAGACCGGCACCGAACTCGGCTCGTATACGGAGATCGT CGACTTCATGCGGACAGCCGCGTCCGATCCGAAAGCGGATTTCCAGGAGCTCTATCGGCGTCTGATCTTCACCATCCTCG TCTCGAATAAGGATGATCACCTGAAGAACCATGGATTTCTCTATGTCGGTTCTGGCCGCTGGCGTCTTTCGCCGGTCTTC GATGTGAACCCGGCTCCCGATCGCAACCCGCATTTGGAGACAGCGATCATGGAAGGCGGCAGCCACGATCGATCGATCAA GCTGGCTTTGGACGCTTGTGAATTCTTCGAGATTCCCGAGGCTGACGCGCGGCGAACGATCCGGACCGCCGCCCAACGGA TATCCGACGGGTGGCGGGATGCCTTCAGACAAGTCGGCGTGACCGGAGCGCGCGTCCGTGATTACGAGCCGGCCTTTATC AACGAACAGACGGACATCGGACTCGCCCTTTAA
Upstream 100 bases:
>100_bases GCCGCTCCTTCGCGACCACACTGCGCAAACAGGAGCGGCAGAATGACAAGCCGAAGCGGAATGAGCCGGACACTGTCGAT CCGGACGGCGTGGCCTTCTG
Downstream 100 bases:
>100_bases CAATCAGATTTGGCAAATTCAATGACTTTATTGGTCATATATGACCAGTAATTAAATCCGCGCCAGGGGAACTCCCGCCC GATCTCGCGTTGCACAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; Amidophosphoribosyl Transferase; HipA Protein; HipA-Like C-Terminal Domain-Containing; HipA-Like; HipA-Like Protein; HipA-Family Phosphatidylinositol 3/4-Kinase; Hipa Protein; Protein Related Capsule Biosynthesis -Like; Protein Containing HipA-Like C-Terminal Domain; HipA Family Protein; Conserved Protein; Orf_Bo
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTESSAQVVLGESLTPIGQLRFTQTGPRQFSTFSYDPAWIKDPRAFTLQPDMPFEGGPFHASAQPGNPRDALAGAFSDAA PDSWGRRLLERAYGKGLSEFEYLTLSDDTCRQGALRFLDDQGKVITGKSVEAVPRLLDLQAITAIARAYEQGKDISAEDM QALAGAGGSGGGRPKANVRDEHVLWLAKFTSIHDQHPIEQIEVATLTLAKACGIRTPEVRLELADTPFPVALIQRFDRRG SARIPYISARTALGKTGTELGSYTEIVDFMRTAASDPKADFQELYRRLIFTILVSNKDDHLKNHGFLYVGSGRWRLSPVF DVNPAPDRNPHLETAIMEGGSHDRSIKLALDACEFFEIPEADARRTIRTAAQRISDGWRDAFRQVGVTGARVRDYEPAFI NEQTDIGLAL
Sequences:
>Translated_410_residues MTESSAQVVLGESLTPIGQLRFTQTGPRQFSTFSYDPAWIKDPRAFTLQPDMPFEGGPFHASAQPGNPRDALAGAFSDAA PDSWGRRLLERAYGKGLSEFEYLTLSDDTCRQGALRFLDDQGKVITGKSVEAVPRLLDLQAITAIARAYEQGKDISAEDM QALAGAGGSGGGRPKANVRDEHVLWLAKFTSIHDQHPIEQIEVATLTLAKACGIRTPEVRLELADTPFPVALIQRFDRRG SARIPYISARTALGKTGTELGSYTEIVDFMRTAASDPKADFQELYRRLIFTILVSNKDDHLKNHGFLYVGSGRWRLSPVF DVNPAPDRNPHLETAIMEGGSHDRSIKLALDACEFFEIPEADARRTIRTAAQRISDGWRDAFRQVGVTGARVRDYEPAFI NEQTDIGLAL >Mature_409_residues TESSAQVVLGESLTPIGQLRFTQTGPRQFSTFSYDPAWIKDPRAFTLQPDMPFEGGPFHASAQPGNPRDALAGAFSDAAP DSWGRRLLERAYGKGLSEFEYLTLSDDTCRQGALRFLDDQGKVITGKSVEAVPRLLDLQAITAIARAYEQGKDISAEDMQ ALAGAGGSGGGRPKANVRDEHVLWLAKFTSIHDQHPIEQIEVATLTLAKACGIRTPEVRLELADTPFPVALIQRFDRRGS ARIPYISARTALGKTGTELGSYTEIVDFMRTAASDPKADFQELYRRLIFTILVSNKDDHLKNHGFLYVGSGRWRLSPVFD VNPAPDRNPHLETAIMEGGSHDRSIKLALDACEFFEIPEADARRTIRTAAQRISDGWRDAFRQVGVTGARVRDYEPAFIN EQTDIGLAL
Specific function: Unknown
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45195; Mature: 45064
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESSAQVVLGESLTPIGQLRFTQTGPRQFSTFSYDPAWIKDPRAFTLQPDMPFEGGPFH CCCCCCEEEECCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC ASAQPGNPRDALAGAFSDAAPDSWGRRLLERAYGKGLSEFEYLTLSDDTCRQGALRFLDD CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCC QGKVITGKSVEAVPRLLDLQAITAIARAYEQGKDISAEDMQALAGAGGSGGGRPKANVRD CCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC EHVLWLAKFTSIHDQHPIEQIEVATLTLAKACGIRTPEVRLELADTPFPVALIQRFDRRG CCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCC SARIPYISARTALGKTGTELGSYTEIVDFMRTAASDPKADFQELYRRLIFTILVSNKDDH CCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCH LKNHGFLYVGSGRWRLSPVFDVNPAPDRNPHLETAIMEGGSHDRSIKLALDACEFFEIPE HCCCCEEEECCCCEEECEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEEHHHHHCCCC ADARRTIRTAAQRISDGWRDAFRQVGVTGARVRDYEPAFINEQTDIGLAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TESSAQVVLGESLTPIGQLRFTQTGPRQFSTFSYDPAWIKDPRAFTLQPDMPFEGGPFH CCCCCEEEECCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC ASAQPGNPRDALAGAFSDAAPDSWGRRLLERAYGKGLSEFEYLTLSDDTCRQGALRFLDD CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCC QGKVITGKSVEAVPRLLDLQAITAIARAYEQGKDISAEDMQALAGAGGSGGGRPKANVRD CCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC EHVLWLAKFTSIHDQHPIEQIEVATLTLAKACGIRTPEVRLELADTPFPVALIQRFDRRG CCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCC SARIPYISARTALGKTGTELGSYTEIVDFMRTAASDPKADFQELYRRLIFTILVSNKDDH CCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCH LKNHGFLYVGSGRWRLSPVFDVNPAPDRNPHLETAIMEGGSHDRSIKLALDACEFFEIPE HCCCCEEEECCCCEEECEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEEHHHHHCCCC ADARRTIRTAAQRISDGWRDAFRQVGVTGARVRDYEPAFINEQTDIGLAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA