| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676267
Identifier: 75676267
GI number: 75676267
Start: 2278420
End: 2278800
Strand: Direct
Name: 75676267
Synonym: Nwi_2078
Alternate gene names: NA
Gene position: 2278420-2278800 (Clockwise)
Preceding gene: 75676266
Following gene: 75676268
Centisome position: 66.97
GC content: 65.09
Gene sequence:
>381_bases ATGAGCTCGCCAAAATCAAAGACGGCCCTTGAGCGGCTTGGCCGTGACCTACGGGCGGCACGACTAAGCCGCCGCGTCGC CGTGGCCGATCTGGCGGTGCGCGCAGGCACGTCAGCCAGCACCGTCGCGCGCCTGGAAAAGGGCGATCCCGGCGTTGGCA TCGGCACACTCGCAGATGTGCTCGTCGCTCTTGGCCTCATCGAAAGACTGGCCGATCTGGTCGATATCCGGAAGGACGAT TTGGGTCTGGCGTTGACCTCCGAGCGCGTGCCGCAACGCGGCCGCTCCTTCGCGACCACACTGCGCAAACAGGAGCGGCA GAATGACAAGCCGAAGCGGAATGAGCCGGACACTGTCGATCCGGACGGCGTGGCCTTCTGA
Upstream 100 bases:
>100_bases TCGAGACCCGACCTGGTATCCTCCATCCCCTTGCAGACTTCATCAATTAGTCATATATGATGTGTTAAATAATATTTTCT TGCATATCTGGACAATTAGG
Downstream 100 bases:
>100_bases TGACCGAATCTTCCGCCCAAGTCGTTCTCGGCGAGAGCTTGACGCCCATCGGTCAATTGCGTTTCACGCAGACTGGGCCG CGTCAGTTTTCAACCTTCTC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Helix-Turn-Helix Domain Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSSPKSKTALERLGRDLRAARLSRRVAVADLAVRAGTSASTVARLEKGDPGVGIGTLADVLVALGLIERLADLVDIRKDD LGLALTSERVPQRGRSFATTLRKQERQNDKPKRNEPDTVDPDGVAF
Sequences:
>Translated_126_residues MSSPKSKTALERLGRDLRAARLSRRVAVADLAVRAGTSASTVARLEKGDPGVGIGTLADVLVALGLIERLADLVDIRKDD LGLALTSERVPQRGRSFATTLRKQERQNDKPKRNEPDTVDPDGVAF >Mature_125_residues SSPKSKTALERLGRDLRAARLSRRVAVADLAVRAGTSASTVARLEKGDPGVGIGTLADVLVALGLIERLADLVDIRKDDL GLALTSERVPQRGRSFATTLRKQERQNDKPKRNEPDTVDPDGVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13574; Mature: 13442
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPKSKTALERLGRDLRAARLSRRVAVADLAVRAGTSASTVARLEKGDPGVGIGTLADV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHH LVALGLIERLADLVDIRKDDLGLALTSERVPQRGRSFATTLRKQERQNDKPKRNEPDTVD HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PDGVAF CCCCCC >Mature Secondary Structure SSPKSKTALERLGRDLRAARLSRRVAVADLAVRAGTSASTVARLEKGDPGVGIGTLADV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHH LVALGLIERLADLVDIRKDDLGLALTSERVPQRGRSFATTLRKQERQNDKPKRNEPDTVD HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PDGVAF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA