Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75676138

Identifier: 75676138

GI number: 75676138

Start: 2135469

End: 2137856

Strand: Direct

Name: 75676138

Synonym: Nwi_1947

Alternate gene names: NA

Gene position: 2135469-2137856 (Clockwise)

Preceding gene: 75676137

Following gene: 75676140

Centisome position: 62.77

GC content: 61.26

Gene sequence:

>2388_bases
ATGGCGGAACTGGACGATACGCAACTGGGCTTGATGAACCTCTACTGGCGCGCGGCTAACTACGTGTCGGTCGGGCAAAT
CTACCTGATGGATAATCCGCTGCTGCGAAAGCCGTTGAAGGCGGAAGACGTGAAGCCGCGGCTGCTCGGTCACTGGGGTA
CGACGCCCGGGCTGAATTTCATCTACGTGCATCTGAATCGGGTCATCAGGGAGCGTGGCACAGACGTCCTCTACATCTGC
GGTCCCGGTCACGGCGGGCCTGCAATGGTCGCCAACACCTACCTGGAGGGCTCGTACAGCGAGATCTATCCGGGGATCAC
GCAGGATGAAGCAGGCTTGCAGAAACTTTTCCGGCAGTTTTCATTCCCGGGTGGTGTGCCCAGCCACGTCGCCCCAGAGA
CGCCCGGCTCCATCCACGAGGGAGGAGAACTCGGCTACGCCCTTGTCCATGCCTTCGGCGCCGCTTTCGACAATCCCGAC
CTCACGGTCGCCTGTGTCGTTGGGGACGGGGAAGCCGAGACGGGTCCGCTGGCCGCTGCGTGGCATTCCAACAGGTTTCT
GAATCCGCAGGTCGATGGCGCGGTCCTGCCGATCCTGCATCTTAACGGCTACAAGATCGCCAATCCCGCCCTGTTGGCGC
GCATGTCTGAAGCCGAACTCAGCGATCTCTTCAGGGGCTACGGCTATGAGCCGCTCTTTGTCGAGGGGCACGAGCCGATC
CCAATGCACCGCACCATGGCTGAGTCCCTGGACCTGGCCATGGATCGTATTCGTGACATCCAGCGAGAGGCGCGGAAGGA
GGGCTGGTCGGGCGAGCGCCCGCGTTGGCCGATGATCATCTTGCGCAGCCCGAAAGGATGGACAGGACCGAAGGAGGTCG
ACGGGAAGAAGGTGGAGGACTTCTGGCGCTCGCATCAGGTCCCGGTTTCCAACGCCCGCGGTGATGCCACACACCGCAAG
ATCCTCGAGGAGTGGCTGCGTAGCTATCGGCCGCAGGAGCTGTTCGACGGGAAGGGTCGCTTCCTGCCGGAGATCGCCGC
CCTAGCGCCCGAAGGTGCGAAACGCATGGGCGCGCTGCCGCATGCCAATGGCGGTCTGCTGAAGAAGGACCTTATCCTGC
CGGACTGGAAGAGCCTCGCGCTCGACATCGGGCAACCGGGAGAAACGATCGCCGAGGCTACCCGCTTGATGGGAGCTTAT
CTGCGTGAGGTCATCCGCCTTAATGCCGAGGCAAGGAATTTCCGCCTCATGGGTCCGGACGAGACCGCCTCGAACAGGCT
CGACGCCGTCTTCGAGGTGACGAACCGCGTCTGGATGGAGAAGATTGAATCCTATGATGTGCACCTCGCGTGCGAGGGCC
GGGTAATGGAGGTTCTGTCAGAGCATCTTTGCCAAGGGTGGCTGGAGGGTTACCTGCTGACTGGACGACATGGCGTGTTC
TCCTGCTACGAGGCCTTCATCCACATCGTGGATTCTATGGTCAATCAGCATGCCAAGTGGCTGAAGGTCTCGGCCGAACT
GCCATGGCGCAAGCCAATCGCCTCACTCAACTATCTCCTGACCTCCCACGTCTGGAGGCAGGACCACAACGGCTTCAGCC
ACCAGGATCCGGGCTTCGCCGACTTCGTCGCCAACAAGAAGGCCGACATCGTCCGCCTTTATTTTCCGCCGGATGCCAAC
ACGCTGCTCTGGGTCACGGACCACTGCCTGAGAACATGGAATCGCATCAACGTGATCACGGCCGGCAAGCAGCCTCAGCC
GCAGTGGCTCACAGCCGAGCAGGCGGAACGCCATTGCGAGGCGGGCGCCGGGATTTGGGAATGGGCGTGCACATGCCCGG
CTGACGAGGAGCCTGACGTGGTGATGGCCTGCTGCGGCGACGTGCCGACACTGGAAATTCTCGCCGCCGTCGGCCTGCTG
CGCCGCGAGTTGCCTGATCTTCGTATTAGGGTGGTCAATGTCGTCGACCTGATGACGCTGCAATCTCACACGACCCATCC
GCACGGGTTCACCGACGATGAATTCGACGCTCTCTTCACGAAGGAGAAGCCCGTGATCTTTGCCTACCACGGCTATCCCT
ACCTCATTCACCGCCTGACCTATAAGCGAACCAACCACGCCAATTTCCATGTCCATGGTTTCCAGGAAGAAGGTACGACC
ACCACGCCATTCGATATGGCGGTCATGAACGAACTCGACCGCTTCCATCTGGTCATAGCCGCCGTCAGGCGGCTGCCGAA
TCTTGGCATGGGCGGCGAACGAGTGATCGGACGGTGCGAGCAAGCGCTGGCCGAGCATGCCTCGTATGCCCGGCAATATG
GTGAAGACATGCCTGAAATCCGGGAATGGAGCTGGCCCTACAAGACTGCCGCCGAGGCGGGAGACTGA

Upstream 100 bases:

>100_bases
GAGAATTCTGATCTGCGCGCCGAGGCTTAGTGAGCATGACCGGCTGGCGAGACCACCCGCGGCGCCGGTTCGTGGCAGAT
ATCTGGAACCGGAGATCGGG

Downstream 100 bases:

>100_bases
TGGCGCCGGGCGACAGCCATTCTGTCGCGTCAGACCTGTACCAGTTCGCCCGTTGCAGCCACTTCGATCCCTGCCGCGTT
GGCCTCATCGGTGTCGATGT

Product: putative phosphoketolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 795; Mature: 794

Protein sequence:

>795_residues
MAELDDTQLGLMNLYWRAANYVSVGQIYLMDNPLLRKPLKAEDVKPRLLGHWGTTPGLNFIYVHLNRVIRERGTDVLYIC
GPGHGGPAMVANTYLEGSYSEIYPGITQDEAGLQKLFRQFSFPGGVPSHVAPETPGSIHEGGELGYALVHAFGAAFDNPD
LTVACVVGDGEAETGPLAAAWHSNRFLNPQVDGAVLPILHLNGYKIANPALLARMSEAELSDLFRGYGYEPLFVEGHEPI
PMHRTMAESLDLAMDRIRDIQREARKEGWSGERPRWPMIILRSPKGWTGPKEVDGKKVEDFWRSHQVPVSNARGDATHRK
ILEEWLRSYRPQELFDGKGRFLPEIAALAPEGAKRMGALPHANGGLLKKDLILPDWKSLALDIGQPGETIAEATRLMGAY
LREVIRLNAEARNFRLMGPDETASNRLDAVFEVTNRVWMEKIESYDVHLACEGRVMEVLSEHLCQGWLEGYLLTGRHGVF
SCYEAFIHIVDSMVNQHAKWLKVSAELPWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFADFVANKKADIVRLYFPPDAN
TLLWVTDHCLRTWNRINVITAGKQPQPQWLTAEQAERHCEAGAGIWEWACTCPADEEPDVVMACCGDVPTLEILAAVGLL
RRELPDLRIRVVNVVDLMTLQSHTTHPHGFTDDEFDALFTKEKPVIFAYHGYPYLIHRLTYKRTNHANFHVHGFQEEGTT
TTPFDMAVMNELDRFHLVIAAVRRLPNLGMGGERVIGRCEQALAEHASYARQYGEDMPEIREWSWPYKTAAEAGD

Sequences:

>Translated_795_residues
MAELDDTQLGLMNLYWRAANYVSVGQIYLMDNPLLRKPLKAEDVKPRLLGHWGTTPGLNFIYVHLNRVIRERGTDVLYIC
GPGHGGPAMVANTYLEGSYSEIYPGITQDEAGLQKLFRQFSFPGGVPSHVAPETPGSIHEGGELGYALVHAFGAAFDNPD
LTVACVVGDGEAETGPLAAAWHSNRFLNPQVDGAVLPILHLNGYKIANPALLARMSEAELSDLFRGYGYEPLFVEGHEPI
PMHRTMAESLDLAMDRIRDIQREARKEGWSGERPRWPMIILRSPKGWTGPKEVDGKKVEDFWRSHQVPVSNARGDATHRK
ILEEWLRSYRPQELFDGKGRFLPEIAALAPEGAKRMGALPHANGGLLKKDLILPDWKSLALDIGQPGETIAEATRLMGAY
LREVIRLNAEARNFRLMGPDETASNRLDAVFEVTNRVWMEKIESYDVHLACEGRVMEVLSEHLCQGWLEGYLLTGRHGVF
SCYEAFIHIVDSMVNQHAKWLKVSAELPWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFADFVANKKADIVRLYFPPDAN
TLLWVTDHCLRTWNRINVITAGKQPQPQWLTAEQAERHCEAGAGIWEWACTCPADEEPDVVMACCGDVPTLEILAAVGLL
RRELPDLRIRVVNVVDLMTLQSHTTHPHGFTDDEFDALFTKEKPVIFAYHGYPYLIHRLTYKRTNHANFHVHGFQEEGTT
TTPFDMAVMNELDRFHLVIAAVRRLPNLGMGGERVIGRCEQALAEHASYARQYGEDMPEIREWSWPYKTAAEAGD
>Mature_794_residues
AELDDTQLGLMNLYWRAANYVSVGQIYLMDNPLLRKPLKAEDVKPRLLGHWGTTPGLNFIYVHLNRVIRERGTDVLYICG
PGHGGPAMVANTYLEGSYSEIYPGITQDEAGLQKLFRQFSFPGGVPSHVAPETPGSIHEGGELGYALVHAFGAAFDNPDL
TVACVVGDGEAETGPLAAAWHSNRFLNPQVDGAVLPILHLNGYKIANPALLARMSEAELSDLFRGYGYEPLFVEGHEPIP
MHRTMAESLDLAMDRIRDIQREARKEGWSGERPRWPMIILRSPKGWTGPKEVDGKKVEDFWRSHQVPVSNARGDATHRKI
LEEWLRSYRPQELFDGKGRFLPEIAALAPEGAKRMGALPHANGGLLKKDLILPDWKSLALDIGQPGETIAEATRLMGAYL
REVIRLNAEARNFRLMGPDETASNRLDAVFEVTNRVWMEKIESYDVHLACEGRVMEVLSEHLCQGWLEGYLLTGRHGVFS
CYEAFIHIVDSMVNQHAKWLKVSAELPWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFADFVANKKADIVRLYFPPDANT
LLWVTDHCLRTWNRINVITAGKQPQPQWLTAEQAERHCEAGAGIWEWACTCPADEEPDVVMACCGDVPTLEILAAVGLLR
RELPDLRIRVVNVVDLMTLQSHTTHPHGFTDDEFDALFTKEKPVIFAYHGYPYLIHRLTYKRTNHANFHVHGFQEEGTTT
TPFDMAVMNELDRFHLVIAAVRRLPNLGMGGERVIGRCEQALAEHASYARQYGEDMPEIREWSWPYKTAAEAGD

Specific function: Unknown

COG id: COG3957

COG function: function code G; Phosphoketolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the XFP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009014
- InterPro:   IPR005593
- InterPro:   IPR018969
- InterPro:   IPR019790
- InterPro:   IPR018970
- InterPro:   IPR019789 [H]

Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]

EC number: NA

Molecular weight: Translated: 89478; Mature: 89347

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS60002 PHOSPHOKETOLASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELDDTQLGLMNLYWRAANYVSVGQIYLMDNPLLRKPLKAEDVKPRLLGHWGTTPGLNF
CCCCCCCHHHHHHHHHHHCCEEEECEEEEECCHHHCCCCCCCCCCCHHEECCCCCCCCEE
IYVHLNRVIRERGTDVLYICGPGHGGPAMVANTYLEGSYSEIYPGITQDEAGLQKLFRQF
EEHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHH
SFPGGVPSHVAPETPGSIHEGGELGYALVHAFGAAFDNPDLTVACVVGDGEAETGPLAAA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEE
WHSNRFLNPQVDGAVLPILHLNGYKIANPALLARMSEAELSDLFRGYGYEPLFVEGHEPI
ECCCCCCCCCCCCEEEEEEEECCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PMHRTMAESLDLAMDRIRDIQREARKEGWSGERPRWPMIILRSPKGWTGPKEVDGKKVED
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH
FWRSHQVPVSNARGDATHRKILEEWLRSYRPQELFDGKGRFLPEIAALAPEGAKRMGALP
HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCCHHHHHCCCC
HANGGLLKKDLILPDWKSLALDIGQPGETIAEATRLMGAYLREVIRLNAEARNFRLMGPD
CCCCCCEECCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
ETASNRLDAVFEVTNRVWMEKIESYDVHLACEGRVMEVLSEHLCQGWLEGYLLTGRHGVF
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCHHH
SCYEAFIHIVDSMVNQHAKWLKVSAELPWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFA
HHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DFVANKKADIVRLYFPPDANTLLWVTDHCLRTWNRINVITAGKQPQPQWLTAEQAERHCE
HHHCCCCCCEEEEEECCCCCEEEEEEHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
AGAGIWEWACTCPADEEPDVVMACCGDVPTLEILAAVGLLRRELPDLRIRVVNVVDLMTL
CCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
QSHTTHPHGFTDDEFDALFTKEKPVIFAYHGYPYLIHRLTYKRTNHANFHVHGFQEEGTT
HCCCCCCCCCCCCHHHHHEECCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCCCCC
TTPFDMAVMNELDRFHLVIAAVRRLPNLGMGGERVIGRCEQALAEHASYARQYGEDMPEI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
REWSWPYKTAAEAGD
HHCCCCCHHHCCCCC
>Mature Secondary Structure 
AELDDTQLGLMNLYWRAANYVSVGQIYLMDNPLLRKPLKAEDVKPRLLGHWGTTPGLNF
CCCCCCHHHHHHHHHHHCCEEEECEEEEECCHHHCCCCCCCCCCCHHEECCCCCCCCEE
IYVHLNRVIRERGTDVLYICGPGHGGPAMVANTYLEGSYSEIYPGITQDEAGLQKLFRQF
EEHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHH
SFPGGVPSHVAPETPGSIHEGGELGYALVHAFGAAFDNPDLTVACVVGDGEAETGPLAAA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEE
WHSNRFLNPQVDGAVLPILHLNGYKIANPALLARMSEAELSDLFRGYGYEPLFVEGHEPI
ECCCCCCCCCCCCEEEEEEEECCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PMHRTMAESLDLAMDRIRDIQREARKEGWSGERPRWPMIILRSPKGWTGPKEVDGKKVED
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH
FWRSHQVPVSNARGDATHRKILEEWLRSYRPQELFDGKGRFLPEIAALAPEGAKRMGALP
HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCCHHHHHCCCC
HANGGLLKKDLILPDWKSLALDIGQPGETIAEATRLMGAYLREVIRLNAEARNFRLMGPD
CCCCCCEECCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
ETASNRLDAVFEVTNRVWMEKIESYDVHLACEGRVMEVLSEHLCQGWLEGYLLTGRHGVF
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCHHH
SCYEAFIHIVDSMVNQHAKWLKVSAELPWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFA
HHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DFVANKKADIVRLYFPPDANTLLWVTDHCLRTWNRINVITAGKQPQPQWLTAEQAERHCE
HHHCCCCCCEEEEEECCCCCEEEEEEHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
AGAGIWEWACTCPADEEPDVVMACCGDVPTLEILAAVGLLRRELPDLRIRVVNVVDLMTL
CCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
QSHTTHPHGFTDDEFDALFTKEKPVIFAYHGYPYLIHRLTYKRTNHANFHVHGFQEEGTT
HCCCCCCCCCCCCHHHHHEECCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCCCCC
TTPFDMAVMNELDRFHLVIAAVRRLPNLGMGGERVIGRCEQALAEHASYARQYGEDMPEI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
REWSWPYKTAAEAGD
HHCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]