| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75675906
Identifier: 75675906
GI number: 75675906
Start: 1869803
End: 1870243
Strand: Direct
Name: 75675906
Synonym: Nwi_1714
Alternate gene names: NA
Gene position: 1869803-1870243 (Clockwise)
Preceding gene: 75675905
Following gene: 75675912
Centisome position: 54.96
GC content: 60.54
Gene sequence:
>441_bases ATGACCGCGCTTCCTCCCGATACCGCGAGCACAGCAGGCAAAACCTGGACCCCGGAAGGCGAAAAGCGCGACACCTGGGC CGCGATGAGGCGCGGGTTATTCTGCCGCTGCCCGAGATGCGGGCAAGGCAAACTTTTTCGTACCTTCCTGAAAACCGCCG ACAATTGTTCGGAATGCGGACTTGATTTTACTCCCCATCGCGCCGACGACCTGCCCGCCTACCTCGTCATCGTCGTCGTC GGCCACATTGTCGTGCCGCTGGCGCTGCTGATCGAGAAAGCGTTTGCTCCGCCGCTGATCCTTCAATGGGCGATCTATCT GCCGCTGACGCTGATCATGGCGCTGTGGCTGATTCAGCCGATCAAGGGTGCGGTCGTCGGCCTCCAATGGGCCCTCCGCA TGCACGGCTTTGACGAGAATTTTGTCGACGACCAGGTCTGA
Upstream 100 bases:
>100_bases ATCCTGATGTTCATTCGAAAGCCCATCCGGGCCGTAAACCGCGCGGGACATCGCGCAAGCCGGGCAGGAGCAAGGCCGGC AAACCGAAGAAGGGCAAATC
Downstream 100 bases:
>100_bases GACCAACCAGGTCTGAGACCGGTCTGATCACTCAACATCCTCGACGGCGCCCGGCGTGGTGCCAAAAGCTCTCTGCGCCA GCGTGGCCGCCATGAAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C Oxidase Subunit III
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTALPPDTASTAGKTWTPEGEKRDTWAAMRRGLFCRCPRCGQGKLFRTFLKTADNCSECGLDFTPHRADDLPAYLVIVVV GHIVVPLALLIEKAFAPPLILQWAIYLPLTLIMALWLIQPIKGAVVGLQWALRMHGFDENFVDDQV
Sequences:
>Translated_146_residues MTALPPDTASTAGKTWTPEGEKRDTWAAMRRGLFCRCPRCGQGKLFRTFLKTADNCSECGLDFTPHRADDLPAYLVIVVV GHIVVPLALLIEKAFAPPLILQWAIYLPLTLIMALWLIQPIKGAVVGLQWALRMHGFDENFVDDQV >Mature_145_residues TALPPDTASTAGKTWTPEGEKRDTWAAMRRGLFCRCPRCGQGKLFRTFLKTADNCSECGLDFTPHRADDLPAYLVIVVVG HIVVPLALLIEKAFAPPLILQWAIYLPLTLIMALWLIQPIKGAVVGLQWALRMHGFDENFVDDQV
Specific function: Unknown
COG id: COG5349
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16263; Mature: 16132
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPPDTASTAGKTWTPEGEKRDTWAAMRRGLFCRCPRCGQGKLFRTFLKTADNCSECG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCHHHCC LDFTPHRADDLPAYLVIVVVGHIVVPLALLIEKAFAPPLILQWAIYLPLTLIMALWLIQP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH IKGAVVGLQWALRMHGFDENFVDDQV HHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TALPPDTASTAGKTWTPEGEKRDTWAAMRRGLFCRCPRCGQGKLFRTFLKTADNCSECG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCHHHCC LDFTPHRADDLPAYLVIVVVGHIVVPLALLIEKAFAPPLILQWAIYLPLTLIMALWLIQP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH IKGAVVGLQWALRMHGFDENFVDDQV HHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA