| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is surA [H]
Identifier: 75675872
GI number: 75675872
Start: 1833024
End: 1833968
Strand: Direct
Name: surA [H]
Synonym: Nwi_1680
Alternate gene names: 75675872
Gene position: 1833024-1833968 (Clockwise)
Preceding gene: 75675871
Following gene: 75675873
Centisome position: 53.88
GC content: 57.57
Gene sequence:
>945_bases ATGAAAATGACCCTGCTCTACCGGCCATCCAGCCTCCTTGCCGTATTCGCATTTCTTACGTTCGTCAGCATGAACTCGCC GCTGCATGCGCAGTCGATCGCGGTCATGGTCAACGGTGAGCCGATCACCACTTTGGATATCGAACAGCGCAGCCGCCTGA TCAAGATATCCACTCACAAATCTCCGTCCCGGCAGGAGGTGATCGACGAGCTGATCGATGAGAAGGTGAAGGTCAAGGAG GCCAAGAAGTACGGTGTGAATCCGACCTCGACGGACATTGATCGTGCCTACGCCAATATGGGCGCGCGGATGGGGATGTC GCCCGAACAGCTGACGAAATCGCTCGGCTCCCAGGGGATTCGCCCGGATACGATTAAGTCGCGCCTGAAAGCCGATCTTG TCTGGGGAAGCCTCGTGCGCGGCCGCTTCAAGGAAAGTCTTCTCGTGAGTGATCGGGACGTCAATGAAGCGCTGAAGAAC AGCGGCGAGGATCAATCGAAGATTGAGGGGGTCGAGTACCAGATGCGCCCTGTCGTTCTGATCGTTCCGCGCGGTGCGAC GGCTTCCATGGTGGAAGCGCGGCGCAACGAGGCCAATGCTTTGCGCGAGCGCGTGCAATCCTGTGCGGAGATCATTCGCA CCGTCAAGGTGATGCGGAATGCCACCCTCCGCGAGACGATCACCAAAACGTCCACCGACCTGCCGCCTCCGCTTCGTGAT CTGCTGGACAAGACGGCGGTGGGACATCTGACGCCGCCGGAAATGACCCGGCAGGGCGTCGAAATGGTGGCGGTATGCGG AAAGAAGGTGACAAGCGTGGACACCCCGAAGAAAAAGGAAATCCGGGAGAAAATGTTCGCCGACAAATATGAGAAGCGAT CCAAATCTTACCTGGAACGTATTCGAAAATCGGCGATGATCGAATATCGTGAGAGCCGCCCCTGA
Upstream 100 bases:
>100_bases AAACGCTATAGGTTTCAAGTGGAGGTGCTTTTTGCAGCAAGACCGGGCTGCCTGATTTGACACAGCCTCCGTCGACAAAA GATCTGCTAGCGCGACTGAC
Downstream 100 bases:
>100_bases GAACGGCGTGCAAATGACGTTCTCGCGTCCCGCAGAAGTCTAAGGCGGCGGATGTCTTGAACGGCGGCACTGTCCGATCA AAAGCCGCGCCGGAGTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQEVIDELIDEKVKVKE AKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKN SGEDQSKIEGVEYQMRPVVLIVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIRKSAMIEYRESRP
Sequences:
>Translated_314_residues MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQEVIDELIDEKVKVKE AKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKN SGEDQSKIEGVEYQMRPVVLIVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIRKSAMIEYRESRP >Mature_314_residues MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQEVIDELIDEKVKVKE AKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKN SGEDQSKIEGVEYQMRPVVLIVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIRKSAMIEYRESRP
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 35382; Mature: 35382
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHK CCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEHHHHCCEEEEECCC SPSRQEVIDELIDEKVKVKEAKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC RPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCCCEEEECCEEE IVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLER HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IRKSAMIEYRESRP HHHHHHHHHHCCCC >Mature Secondary Structure MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHK CCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEHHHHCCEEEEECCC SPSRQEVIDELIDEKVKVKEAKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC RPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCCCEEEECCEEE IVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLER HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IRKSAMIEYRESRP HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA