Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75675858

Identifier: 75675858

GI number: 75675858

Start: 1813358

End: 1814005

Strand: Direct

Name: 75675858

Synonym: Nwi_1666

Alternate gene names: NA

Gene position: 1813358-1814005 (Clockwise)

Preceding gene: 75675850

Following gene: 75675860

Centisome position: 53.3

GC content: 59.88

Gene sequence:

>648_bases
ATGCCTGAAGTCATTTTTACCGGTCCCGCCGGCCGTCTCGAAGGCCGCTACCATCCAGCGAAGCAGAAAAATGCCCCGAT
AGCGATGGTCCTGCATCCGCACCCACAGTTTCGCGGCAGCATGAACCACCCGATTGTCTATCAGGTTTACTATGCTTTCG
TGGCGCGGGGCTTTTCCGTGCTGCGTTTCAATTTCCGTGGCGTTGGCCGCAGCCAGGGCTCGTTCGACCACGGCACCGGC
GAATTGTCGGACGCCGCGGCTGCGCTCGACTGGGCGCAGACCATCAACCCGGAGGCGCGCGCCTGCTGGGTCGCGGGATT
TTCCTTTGGCGCCTGGATCGGAATGCAGTTGCTGATGCGGCGGCCCGAGGTGGAAGGCTTCATCTCGATCGCGCCTGAAC
CCAACCGCTACGATTTCTCGTTCCTGGCGCCGTGCCCGTCATCGGGGCTTATCGTCCACGGCGAGAAGGATATCGTCGCG
CCAGCCAAGGATGTCACGACGCTGGTCGAGAAGCTGAAGACCCAGAAGGGAATCGTGATCGATCAGCAAACCATTCCGGG
TGCGAACCATTTCTTCGAGGACAAGATGGAACCGTTGATGGAAACGGTCACCAGCTATCTCGATATGAGGCTTGCCAACA
TCCGGTAG

Upstream 100 bases:

>100_bases
GCACTTTCTGTTACCGCCATCGCGGCGGCCTGATCGCCCTCGTCGTCGAGCCGCGAACGGAAACCGATCCTGTGAGCGGC
TTGATTTGCCAAGGATTCCG

Downstream 100 bases:

>100_bases
CCGCATCGCGTGTGGGACGCAATATCGTACGCCACAGCGTCGCGAATGGTTCAGGGCCGCGTGACCACACCGCCGGTCAT
CGGCACCGGCACTCCGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTG
ELSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVA
PAKDVTTLVEKLKTQKGIVIDQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR

Sequences:

>Translated_215_residues
MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTG
ELSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVA
PAKDVTTLVEKLKTQKGIVIDQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR
>Mature_214_residues
PEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTGE
LSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAP
AKDVTTLVEKLKTQKGIVIDQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 23909; Mature: 23778

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSV
CCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEE
LRFNFRGVGRSQGSFDHGTGELSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMR
EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
RPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAPAKDVTTLVEKLKTQKGIVI
CCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEE
DQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSV
CCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEE
LRFNFRGVGRSQGSFDHGTGELSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMR
EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
RPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAPAKDVTTLVEKLKTQKGIVI
CCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEE
DQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]