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The map label for this gene is ydiD [C]

Identifier: 75675703

GI number: 75675703

Start: 1640359

End: 1641861

Strand: Direct

Name: ydiD [C]

Synonym: Nwi_1511

Alternate gene names: 75675703

Gene position: 1640359-1641861 (Clockwise)

Preceding gene: 75675702

Following gene: 75675704

Centisome position: 48.22

GC content: 66.07

Gene sequence:

>1503_bases
GTGCTCCAGAACAATTCATCGCCTACGCTGGATGAACTCTTCGACCGCATCCTCGTCCGGCAGCCGGACCGGCCGGCGCT
GATCGATCCGCCGGACAAGCTGCGGGTGACGGGACAGTCACCCCTGCATCTGACCTTTGCCCAGGCCGACCGGGCGGTAT
CAGCATTGGCGGCCCACTTCATCGAGGCTGGCCTGCCCGCCAATTCGATCATAGCGGTACAGCTACCCAACACCATCGAA
CTGGCGCTGACAGTGCTTGCCGCCCATCGCGCCGGTCTGATCGTGGCGTTGTTGCCCCAGCTTTGGCGGCAGGCCGAGCT
CGCTGTTGCGATCAACCGGACAGGCGCGCGCGCGATCGTCGCGATGGGCAATATCGACGGCGTCAATCATGCCGACCTCG
CGATGAACGCGGCGGCGGAAGTGTTCTCCGTCCGTCATGTCTGCGGCTTCGGCAGCAACTTGCCGGAAGGTATGGTTCCG
CTGGATATCGCTACCGAAAGGACAATCGACCGCTCGCGGCTGATGATCCGGGATTCGCGCCGCGCCGCGCTGGTGACGTT
CGAGGCTTCGGGCTCGGGCTTCCTCGCCGTGCCGCGAACCCACGTCAACCTGATCGCCGCCGGGCTTGCCATCTTTCTCG
AGAGCAGCCTGCCTCAGAACGCGACAATTCTCTCGGCTCTCGCGCCGTCGTCCTTCGCCGGGCTGACCTCATCCTTCGTG
ATGTGGCTGCTCAGCGGCGGCACCCTGGCGATGCATCATCCCTTCGACGAAACTGTTCTCGTGCGGCAGATGGAAACCGA
ACGCTGCGACACGCTGGTCGCGCCGGCCTCCCTGGCATTGCGGATGGCTGAAACCGGTGCTCTGTCTTCCGTCCCGAGCC
TGCGTCATGTCGTTGGTCTCTGGCGGGTTCCGGAACAGGTGGGATCGAGCGCGCCCTGGTCCGACAGCGAGAGGCAAATG
ACCGACGTCTACCTGTTCGGCGAGGCGGGTCTTTTCGCGAGCCGCCGCGTGGAGGACGGCTCCCCTGCCCCGATCATGCC
CGGCCCTTATCGGACGCCACCTCAGGTTCCCATCACATCCACGGCCGGCGAGATCGTTTTGACCCCGCACGGCACGCTGG
GGCTGCGAGGGCCGATGGTGCCGATCGCGGCCTACGCCGCGCCGGAGTCTCCTTCCGAGGACTTCGTCGTGCCGTCGCAG
CCGGATTATGTCGATACCGGCTATGCCGCGCGGATCGATCGCGCCACGGGCGCCATTGCGATCACGGCGCCGCCGGCCGG
CGTCATGGCCGTCGGCGGCTACCGGTTTCCCGCACAGGACCTTCAGGAATGGGCGCGACGGCTCGGACCGAACGCCATGC
TGACGGCGCTTCCCGACCGTCTGAGCGGCCATCGCCTTGCCGGGCGAGCCGGCGACAATGCCCGCGCTCGCGAGGCTCTC
AAGGAACTGGGGCTGAACCCGTTGATGGTGGAAGCATTTCGCGATCGTTCCGTGAGCGGCTGA

Upstream 100 bases:

>100_bases
GCGCGCTGGAATCGGATAGAACGACCGGCAGCGACCGCGTTGACTGGATACATCCCTGAAACTTGGTGGCGAAGGCCGCC
GAAGCCCGGCAAGTGACTTC

Downstream 100 bases:

>100_bases
TCAAATCCGGCGCCATTCATTGACGCCGCATTAAGGGACAATAAACTAGCCTCACACGCCTTTGGCACGTACCGAGTTGG
TGAGAATGTCCCAGCAAGGC

Product: AMP-dependent synthetase and ligase

Products: NA

Alternate protein names: Acid-CoA Ligase; Acyl-CoA Synthetase/AMP-Acid Ligase II-Like Protein; Acyl-CoA Ligase/Synthetase; 2 3-Dihydrosybenzoate-AMP Ligase; AMP-Dependent Acyl-CoA Synthetase/AMP-Acid Ligases II; Peroxisomal-Co A Synthetase; Cyclohexanecarboxylate-CoA Ligase; Fatty-Acid-CoA Ligase

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MLQNNSSPTLDELFDRILVRQPDRPALIDPPDKLRVTGQSPLHLTFAQADRAVSALAAHFIEAGLPANSIIAVQLPNTIE
LALTVLAAHRAGLIVALLPQLWRQAELAVAINRTGARAIVAMGNIDGVNHADLAMNAAAEVFSVRHVCGFGSNLPEGMVP
LDIATERTIDRSRLMIRDSRRAALVTFEASGSGFLAVPRTHVNLIAAGLAIFLESSLPQNATILSALAPSSFAGLTSSFV
MWLLSGGTLAMHHPFDETVLVRQMETERCDTLVAPASLALRMAETGALSSVPSLRHVVGLWRVPEQVGSSAPWSDSERQM
TDVYLFGEAGLFASRRVEDGSPAPIMPGPYRTPPQVPITSTAGEIVLTPHGTLGLRGPMVPIAAYAAPESPSEDFVVPSQ
PDYVDTGYAARIDRATGAIAITAPPAGVMAVGGYRFPAQDLQEWARRLGPNAMLTALPDRLSGHRLAGRAGDNARAREAL
KELGLNPLMVEAFRDRSVSG

Sequences:

>Translated_500_residues
MLQNNSSPTLDELFDRILVRQPDRPALIDPPDKLRVTGQSPLHLTFAQADRAVSALAAHFIEAGLPANSIIAVQLPNTIE
LALTVLAAHRAGLIVALLPQLWRQAELAVAINRTGARAIVAMGNIDGVNHADLAMNAAAEVFSVRHVCGFGSNLPEGMVP
LDIATERTIDRSRLMIRDSRRAALVTFEASGSGFLAVPRTHVNLIAAGLAIFLESSLPQNATILSALAPSSFAGLTSSFV
MWLLSGGTLAMHHPFDETVLVRQMETERCDTLVAPASLALRMAETGALSSVPSLRHVVGLWRVPEQVGSSAPWSDSERQM
TDVYLFGEAGLFASRRVEDGSPAPIMPGPYRTPPQVPITSTAGEIVLTPHGTLGLRGPMVPIAAYAAPESPSEDFVVPSQ
PDYVDTGYAARIDRATGAIAITAPPAGVMAVGGYRFPAQDLQEWARRLGPNAMLTALPDRLSGHRLAGRAGDNARAREAL
KELGLNPLMVEAFRDRSVSG
>Mature_500_residues
MLQNNSSPTLDELFDRILVRQPDRPALIDPPDKLRVTGQSPLHLTFAQADRAVSALAAHFIEAGLPANSIIAVQLPNTIE
LALTVLAAHRAGLIVALLPQLWRQAELAVAINRTGARAIVAMGNIDGVNHADLAMNAAAEVFSVRHVCGFGSNLPEGMVP
LDIATERTIDRSRLMIRDSRRAALVTFEASGSGFLAVPRTHVNLIAAGLAIFLESSLPQNATILSALAPSSFAGLTSSFV
MWLLSGGTLAMHHPFDETVLVRQMETERCDTLVAPASLALRMAETGALSSVPSLRHVVGLWRVPEQVGSSAPWSDSERQM
TDVYLFGEAGLFASRRVEDGSPAPIMPGPYRTPPQVPITSTAGEIVLTPHGTLGLRGPMVPIAAYAAPESPSEDFVVPSQ
PDYVDTGYAARIDRATGAIAITAPPAGVMAVGGYRFPAQDLQEWARRLGPNAMLTALPDRLSGHRLAGRAGDNARAREAL
KELGLNPLMVEAFRDRSVSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53225; Mature: 53225

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNNSSPTLDELFDRILVRQPDRPALIDPPDKLRVTGQSPLHLTFAQADRAVSALAAHF
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHEEECCCCCEEEEHHHHHHHHHHHHHHH
IEAGLPANSIIAVQLPNTIELALTVLAAHRAGLIVALLPQLWRQAELAVAINRTGARAIV
HHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEEEEECCCCEEEE
AMGNIDGVNHADLAMNAAAEVFSVRHVCGFGSNLPEGMVPLDIATERTIDRSRLMIRDSR
EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHEEECCC
RAALVTFEASGSGFLAVPRTHVNLIAAGLAIFLESSLPQNATILSALAPSSFAGLTSSFV
CEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCHHHHHHHHHH
MWLLSGGTLAMHHPFDETVLVRQMETERCDTLVAPASLALRMAETGALSSVPSLRHVVGL
HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCCCCHHHHHHHH
WRVPEQVGSSAPWSDSERQMTDVYLFGEAGLFASRRVEDGSPAPIMPGPYRTPPQVPITS
HHCHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
TAGEIVLTPHGTLGLRGPMVPIAAYAAPESPSEDFVVPSQPDYVDTGYAARIDRATGAIA
CCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCEEE
ITAPPAGVMAVGGYRFPAQDLQEWARRLGPNAMLTALPDRLSGHRLAGRAGDNARAREAL
EECCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEECCCHHCCCCEECCCCCCCHHHHHHH
KELGLNPLMVEAFRDRSVSG
HHHCCCCEEHHHHHCCCCCC
>Mature Secondary Structure
MLQNNSSPTLDELFDRILVRQPDRPALIDPPDKLRVTGQSPLHLTFAQADRAVSALAAHF
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHEEECCCCCEEEEHHHHHHHHHHHHHHH
IEAGLPANSIIAVQLPNTIELALTVLAAHRAGLIVALLPQLWRQAELAVAINRTGARAIV
HHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEEEEECCCCEEEE
AMGNIDGVNHADLAMNAAAEVFSVRHVCGFGSNLPEGMVPLDIATERTIDRSRLMIRDSR
EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHEEECCC
RAALVTFEASGSGFLAVPRTHVNLIAAGLAIFLESSLPQNATILSALAPSSFAGLTSSFV
CEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCHHHHHHHHHH
MWLLSGGTLAMHHPFDETVLVRQMETERCDTLVAPASLALRMAETGALSSVPSLRHVVGL
HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCCCCHHHHHHHH
WRVPEQVGSSAPWSDSERQMTDVYLFGEAGLFASRRVEDGSPAPIMPGPYRTPPQVPITS
HHCHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
TAGEIVLTPHGTLGLRGPMVPIAAYAAPESPSEDFVVPSQPDYVDTGYAARIDRATGAIA
CCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCEEE
ITAPPAGVMAVGGYRFPAQDLQEWARRLGPNAMLTALPDRLSGHRLAGRAGDNARAREAL
EECCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEECCCHHCCCCEECCCCCCCHHHHHHH
KELGLNPLMVEAFRDRSVSG
HHHCCCCEEHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA