| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is pssA [H]
Identifier: 75675428
GI number: 75675428
Start: 1359152
End: 1360030
Strand: Direct
Name: pssA [H]
Synonym: Nwi_1235
Alternate gene names: 75675428
Gene position: 1359152-1360030 (Clockwise)
Preceding gene: 75675427
Following gene: 75675429
Centisome position: 39.95
GC content: 63.59
Gene sequence:
>879_bases TTGCGCCGCCGCCGGTTTCGTCCGATTCCGGTGCGGATGCTGGTGCCGAATTTTATCACGCTGCTTGCGATCTGCGCGGG ATTGACGGCGATCCGTCTCTCCACCGAGGGGCGGATGGAGCTTGCGGTGGGGGCCATCGTATTCGCGGCCGTGCTCGACG GGCTCGACGGGCGGGTCGCCCGGATGATCAAAGGGCAATCGAAGTTCGGCGCCGAGCTCGACAGCCTCGCGGACTTCGTC AATTTCGGCGTTGCGCCCGGCCTCATCCTTTATTTCTGGCAGTTGCACGACCTCAGCAATGTGGGCTGGATCGCGGCGAT GATATTCGCGATCAGCGGCGGCCTGCGCCTCGCCCGCTTCAATGCGACCATGAATGACGAGAACAAGCCGGCCTTCGCCG CGAATTTCTTCACCGGCGTTCCCGCGCCGGCGGGTGCGATCGCGGTGCTGTTGCCGATCTATCTTTCGTTTCTGGGCATA CCGCAGCCCCCAGCGGTACTGACGGCGTTCTATACGCTGTTGATCGCCATCCTCATGGTTTCCCGGCTGCCGGTCTTCTC CGGCAAGACAGTTGGGATGCGCGTTCAGCCGGAACTCGTGCTGCCGGTCTTCGTGTCGGTGGTCTTCGTCATCGCGCTCC TGATCAGCTACCCCTGGGTGGTTCTGTCCTTCGGTTCGATCATTTTCCTGTTGAGCCTTCCGGTCGGCTGGAAATCCTAT CATGATCAGGAACTCAAGGCCGCCGTGCAGGAGACGTTTCCGGACGCGGCGGCATCGGCGGAAGCCGCCCCGCCGGCCTC GGCAGCGACCAAGCCTGCGCCGCCGACCATTCCGATCCGGCAGCGCAAGCAGGACAACCGGCCCTCCCGTCCGCATTGA
Upstream 100 bases:
>100_bases AAACGCTTCGGTTCGTCGGGGACGCCGAGACGATGGTGGCCCCGGCAAGCCTTCCCATACAGGAGACGCGCAGACGCCAT ACGATCCCAAAACGCCCGAG
Downstream 100 bases:
>100_bases GATCCTTGCGGAAAGCAGCCCGTAGCGTTTCGAGCAAGGCATGTTTCTCGGGCTTGCCACAGGAAACGGATGCCGGTTCG CCTAAAGAAAGCGCATGAAA
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVARMIKGQSKFGAELDSLADFV NFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARFNATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGI PQPPAVLTAFYTLLIAILMVSRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH
Sequences:
>Translated_292_residues MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVARMIKGQSKFGAELDSLADFV NFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARFNATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGI PQPPAVLTAFYTLLIAILMVSRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH >Mature_292_residues MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVARMIKGQSKFGAELDSLADFV NFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARFNATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGI PQPPAVLTAFYTLLIAILMVSRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=143, Percent_Identity=34.2657342657343, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 31608; Mature: 31608
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVA CCCCCCCCCCHHHHHHHHHHHHHHHHCHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH RMIKGQSKFGAELDSLADFVNFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARF HHHHCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEE NATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGIPQPPAVLTAFYTLLIAILMV ECCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH HHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVA CCCCCCCCCCHHHHHHHHHHHHHHHHCHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH RMIKGQSKFGAELDSLADFVNFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARF HHHHCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEE NATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGIPQPPAVLTAFYTLLIAILMV ECCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH HHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]