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The map label for this gene is psd [H]

Identifier: 75675427

GI number: 75675427

Start: 1358310

End: 1359053

Strand: Direct

Name: psd [H]

Synonym: Nwi_1234

Alternate gene names: 75675427

Gene position: 1358310-1359053 (Clockwise)

Preceding gene: 75675426

Following gene: 75675428

Centisome position: 39.93

GC content: 60.75

Gene sequence:

>744_bases
ATGCCCATAGATCGACAGACTCTCCTCTCCATCGCGAAATCCGTTCGCTCCGGCGCAAGATCCGTGCGAGCGCAGATTTC
GCCGATTCATCCGAAGGGGTATCCCTTCGTCGGTGGCTTCGCATTGGCCACCATCATCCTGTTCTGGATCTGGAGCCCGC
TGGGCTGGATCGGAACGCTGCTGACAATCTGGTGCGCGCTGTTCTTCCGCAATCCCGCCCGTGTGACGCCAATCCGGGAG
GGGCTTGTCGTCGCGCCGGCAGACGGACGGATCTCGATGATCGCACCGGTTGTGCCGCCCGCCGAACTCGAGCTTGGCGA
GCTGCCGATGGTGCGTATTTCGATTTTCATGAGTGTGTTCAATTGCCACGTCAATCGCAGCCCGGTTGCGGGGCGGATCG
AACGGATCGTCTATCGCCCCGGCAAGTTCATCAATGCCGAACTCGACAAGGCGAGCGAGGACAACGAGCGTAACGCGCTC
GTCATATCGACGCCAAACAATGGCCTGGTTGGCGTGATTCAGATCGCCGGACTGATCGCGCGCCGTATCGTGACCTTCGT
CCATGACGGGCAGACGGTCGAGACTGGCGAACGCTTCGGGCTGATCCGGTTCGGCTCGCGGCTCGACGTCTTCCTTCCGG
AGGGAACGCAGGTGCTAGTGTCCGAGGGACAGACCACGATCGCCGGCGAGACGGTGCTGGCTGATTTTCAGCAGACAGAC
GGGCGGACTTTTCGTAGTAGTTAA

Upstream 100 bases:

>100_bases
CCGAATCAGGCATTGAATCCATACGGTGCTGATCGAGGGTCGTGTCGTGTTTTCATAAGTCACCTTCACCTCAGGCTCAT
TCGCATATCATCAGGTGCTC

Downstream 100 bases:

>100_bases
ACGCTTCGGTTCGTCGGGGACGCCGAGACGATGGTGGCCCCGGCAAGCCTTCCCATACAGGAGACGCGCAGACGCCATAC
GATCCCAAAACGCCCGAGTT

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MPIDRQTLLSIAKSVRSGARSVRAQISPIHPKGYPFVGGFALATIILFWIWSPLGWIGTLLTIWCALFFRNPARVTPIRE
GLVVAPADGRISMIAPVVPPAELELGELPMVRISIFMSVFNCHVNRSPVAGRIERIVYRPGKFINAELDKASEDNERNAL
VISTPNNGLVGVIQIAGLIARRIVTFVHDGQTVETGERFGLIRFGSRLDVFLPEGTQVLVSEGQTTIAGETVLADFQQTD
GRTFRSS

Sequences:

>Translated_247_residues
MPIDRQTLLSIAKSVRSGARSVRAQISPIHPKGYPFVGGFALATIILFWIWSPLGWIGTLLTIWCALFFRNPARVTPIRE
GLVVAPADGRISMIAPVVPPAELELGELPMVRISIFMSVFNCHVNRSPVAGRIERIVYRPGKFINAELDKASEDNERNAL
VISTPNNGLVGVIQIAGLIARRIVTFVHDGQTVETGERFGLIRFGSRLDVFLPEGTQVLVSEGQTTIAGETVLADFQQTD
GRTFRSS
>Mature_246_residues
PIDRQTLLSIAKSVRSGARSVRAQISPIHPKGYPFVGGFALATIILFWIWSPLGWIGTLLTIWCALFFRNPARVTPIREG
LVVAPADGRISMIAPVVPPAELELGELPMVRISIFMSVFNCHVNRSPVAGRIERIVYRPGKFINAELDKASEDNERNALV
ISTPNNGLVGVIQIAGLIARRIVTFVHDGQTVETGERFGLIRFGSRLDVFLPEGTQVLVSEGQTTIAGETVLADFQQTDG
RTFRSS

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 27064; Mature: 26933

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDRQTLLSIAKSVRSGARSVRAQISPIHPKGYPFVGGFALATIILFWIWSPLGWIGTL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTIWCALFFRNPARVTPIREGLVVAPADGRISMIAPVVPPAELELGELPMVRISIFMSVF
HHHHHHHHHCCCCCCCHHHCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
NCHVNRSPVAGRIERIVYRPGKFINAELDKASEDNERNALVISTPNNGLVGVIQIAGLIA
HHCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
RRIVTFVHDGQTVETGERFGLIRFGSRLDVFLPEGTQVLVSEGQTTIAGETVLADFQQTD
HHHHHHHCCCCEEECCCCEEEEEECCEEEEEECCCCEEEEECCCEEECCHHHHHHHHHCC
GRTFRSS
CCCCCCC
>Mature Secondary Structure 
PIDRQTLLSIAKSVRSGARSVRAQISPIHPKGYPFVGGFALATIILFWIWSPLGWIGTL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTIWCALFFRNPARVTPIREGLVVAPADGRISMIAPVVPPAELELGELPMVRISIFMSVF
HHHHHHHHHCCCCCCCHHHCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
NCHVNRSPVAGRIERIVYRPGKFINAELDKASEDNERNALVISTPNNGLVGVIQIAGLIA
HHCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
RRIVTFVHDGQTVETGERFGLIRFGSRLDVFLPEGTQVLVSEGQTTIAGETVLADFQQTD
HHHHHHHCCCCEEECCCCEEEEEECCEEEEEECCCCEEEEECCCEEECCHHHHHHHHHCC
GRTFRSS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA