Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is pssA [H]

Identifier: 75675428

GI number: 75675428

Start: 1359152

End: 1360030

Strand: Direct

Name: pssA [H]

Synonym: Nwi_1235

Alternate gene names: 75675428

Gene position: 1359152-1360030 (Clockwise)

Preceding gene: 75675427

Following gene: 75675429

Centisome position: 39.95

GC content: 63.59

Gene sequence:

>879_bases
TTGCGCCGCCGCCGGTTTCGTCCGATTCCGGTGCGGATGCTGGTGCCGAATTTTATCACGCTGCTTGCGATCTGCGCGGG
ATTGACGGCGATCCGTCTCTCCACCGAGGGGCGGATGGAGCTTGCGGTGGGGGCCATCGTATTCGCGGCCGTGCTCGACG
GGCTCGACGGGCGGGTCGCCCGGATGATCAAAGGGCAATCGAAGTTCGGCGCCGAGCTCGACAGCCTCGCGGACTTCGTC
AATTTCGGCGTTGCGCCCGGCCTCATCCTTTATTTCTGGCAGTTGCACGACCTCAGCAATGTGGGCTGGATCGCGGCGAT
GATATTCGCGATCAGCGGCGGCCTGCGCCTCGCCCGCTTCAATGCGACCATGAATGACGAGAACAAGCCGGCCTTCGCCG
CGAATTTCTTCACCGGCGTTCCCGCGCCGGCGGGTGCGATCGCGGTGCTGTTGCCGATCTATCTTTCGTTTCTGGGCATA
CCGCAGCCCCCAGCGGTACTGACGGCGTTCTATACGCTGTTGATCGCCATCCTCATGGTTTCCCGGCTGCCGGTCTTCTC
CGGCAAGACAGTTGGGATGCGCGTTCAGCCGGAACTCGTGCTGCCGGTCTTCGTGTCGGTGGTCTTCGTCATCGCGCTCC
TGATCAGCTACCCCTGGGTGGTTCTGTCCTTCGGTTCGATCATTTTCCTGTTGAGCCTTCCGGTCGGCTGGAAATCCTAT
CATGATCAGGAACTCAAGGCCGCCGTGCAGGAGACGTTTCCGGACGCGGCGGCATCGGCGGAAGCCGCCCCGCCGGCCTC
GGCAGCGACCAAGCCTGCGCCGCCGACCATTCCGATCCGGCAGCGCAAGCAGGACAACCGGCCCTCCCGTCCGCATTGA

Upstream 100 bases:

>100_bases
AAACGCTTCGGTTCGTCGGGGACGCCGAGACGATGGTGGCCCCGGCAAGCCTTCCCATACAGGAGACGCGCAGACGCCAT
ACGATCCCAAAACGCCCGAG

Downstream 100 bases:

>100_bases
GATCCTTGCGGAAAGCAGCCCGTAGCGTTTCGAGCAAGGCATGTTTCTCGGGCTTGCCACAGGAAACGGATGCCGGTTCG
CCTAAAGAAAGCGCATGAAA

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVARMIKGQSKFGAELDSLADFV
NFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARFNATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGI
PQPPAVLTAFYTLLIAILMVSRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY
HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH

Sequences:

>Translated_292_residues
MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVARMIKGQSKFGAELDSLADFV
NFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARFNATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGI
PQPPAVLTAFYTLLIAILMVSRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY
HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH
>Mature_292_residues
MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVARMIKGQSKFGAELDSLADFV
NFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARFNATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGI
PQPPAVLTAFYTLLIAILMVSRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY
HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=143, Percent_Identity=34.2657342657343, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 31608; Mature: 31608

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVA
CCCCCCCCCCHHHHHHHHHHHHHHHHCHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH
RMIKGQSKFGAELDSLADFVNFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARF
HHHHCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEE
NATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGIPQPPAVLTAFYTLLIAILMV
ECCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY
HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH
HHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MRRRRFRPIPVRMLVPNFITLLAICAGLTAIRLSTEGRMELAVGAIVFAAVLDGLDGRVA
CCCCCCCCCCHHHHHHHHHHHHHHHHCHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH
RMIKGQSKFGAELDSLADFVNFGVAPGLILYFWQLHDLSNVGWIAAMIFAISGGLRLARF
HHHHCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEE
NATMNDENKPAFAANFFTGVPAPAGAIAVLLPIYLSFLGIPQPPAVLTAFYTLLIAILMV
ECCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SRLPVFSGKTVGMRVQPELVLPVFVSVVFVIALLISYPWVVLSFGSIIFLLSLPVGWKSY
HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
HDQELKAAVQETFPDAAASAEAAPPASAATKPAPPTIPIRQRKQDNRPSRPH
HHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]