| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675372
Identifier: 75675372
GI number: 75675372
Start: 1283622
End: 1284515
Strand: Direct
Name: 75675372
Synonym: Nwi_1179
Alternate gene names: NA
Gene position: 1283622-1284515 (Clockwise)
Preceding gene: 75675371
Following gene: 75675373
Centisome position: 37.73
GC content: 67.56
Gene sequence:
>894_bases GTGAGAAGCATTCCTTCCGCGCTTCAGGCAAAGCTCGACTCCGGCGCGACCACGCTGGCGCGCTGCTGGATCGTGACGCG GCGCGACGGCGTCGTGCTCGGCTTTACCGATCACGACCGCGATCTGACGATCGGCGGCGTCCTCTGCCGCGCCGCCACCG GCTTCACCGCGTCGGAAGCCACCAGCCGTTTCGATCTCGCTGTCGATGGCGGCGAGATATCGGGCGCTTTCTCGGATGAT TCCCTGAGCGAGGCCGATCTTGCCGCCGGCCGTTACGATGCCGCCGGGGTCGCGACCTGGCTGGTCGACTGGAGCGACGT CTCGCTGAGGATCCTGATCGCGCGCGGCACGATAGGAGAGGTCCGGCGCGAGGGGGCCGCCTTCACCGCGGAACTGCGCG GGCTTGCGGATGCGCTGGCGCAGGACAGCGGACGCCTGTTCACGGCGCGGTGCGGCGTCGATCTCGGCGACGGGAAATGC CGTGTCGATCTGGCCAGCTCGGCCTTTCGCCGCAGCGGGACGGTTACGGCCGTCGAGGGAACCTCGATCGTTGCGGTTTC CGGACTTTCCGGCCTTGCCGCCGGCTGGTTCACGGCGGGGCGGTTGAACTGGACCGGCGGAGCCAACGCCGGCCTCGCGA TCGAGGTCAAGCAGCACCGCGTGGTCGCGGGCGTGGTGCGCCTGTCATTGTGGCGGGCGATGGCGGAGCCGATTGCCATC GGCGACAGCTTCGTGGTCACCGCCGGTTGCGACAAGAGTTTCACGACCTGCCGCGACCGCTTCGCCAACACCAGTAATTT TCGGGGTTTCCCCCAAATTCCCGGCAACGATTTCGTCGTCAGCTATCCGCTGCCGGGTTCGCCCGATAACGGCAACGGCA GCAAGGCACTGTGA
Upstream 100 bases:
>100_bases TCGACGTGCCGGTGCGGTTCGACACCGACTATCTCGAAGTCGATCTCTCGACCTTCGCCGCCGGCGCTATTCCGAAAATT CCGCTGGTGGAGATACTGCC
Downstream 100 bases:
>100_bases AGGAGCCGCTCGTGAGTTGTGTTTGCTCGACCCGCGCGGCCATCGTCGCCGAGGCGCGCGGCTGGATCGGCACGCCCTAT CGGCATCAGGCCTCGCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MRSIPSALQAKLDSGATTLARCWIVTRRDGVVLGFTDHDRDLTIGGVLCRAATGFTASEATSRFDLAVDGGEISGAFSDD SLSEADLAAGRYDAAGVATWLVDWSDVSLRILIARGTIGEVRREGAAFTAELRGLADALAQDSGRLFTARCGVDLGDGKC RVDLASSAFRRSGTVTAVEGTSIVAVSGLSGLAAGWFTAGRLNWTGGANAGLAIEVKQHRVVAGVVRLSLWRAMAEPIAI GDSFVVTAGCDKSFTTCRDRFANTSNFRGFPQIPGNDFVVSYPLPGSPDNGNGSKAL
Sequences:
>Translated_297_residues MRSIPSALQAKLDSGATTLARCWIVTRRDGVVLGFTDHDRDLTIGGVLCRAATGFTASEATSRFDLAVDGGEISGAFSDD SLSEADLAAGRYDAAGVATWLVDWSDVSLRILIARGTIGEVRREGAAFTAELRGLADALAQDSGRLFTARCGVDLGDGKC RVDLASSAFRRSGTVTAVEGTSIVAVSGLSGLAAGWFTAGRLNWTGGANAGLAIEVKQHRVVAGVVRLSLWRAMAEPIAI GDSFVVTAGCDKSFTTCRDRFANTSNFRGFPQIPGNDFVVSYPLPGSPDNGNGSKAL >Mature_297_residues MRSIPSALQAKLDSGATTLARCWIVTRRDGVVLGFTDHDRDLTIGGVLCRAATGFTASEATSRFDLAVDGGEISGAFSDD SLSEADLAAGRYDAAGVATWLVDWSDVSLRILIARGTIGEVRREGAAFTAELRGLADALAQDSGRLFTARCGVDLGDGKC RVDLASSAFRRSGTVTAVEGTSIVAVSGLSGLAAGWFTAGRLNWTGGANAGLAIEVKQHRVVAGVVRLSLWRAMAEPIAI GDSFVVTAGCDKSFTTCRDRFANTSNFRGFPQIPGNDFVVSYPLPGSPDNGNGSKAL
Specific function: Unknown
COG id: COG5449
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30971; Mature: 30971
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIPSALQAKLDSGATTLARCWIVTRRDGVVLGFTDHDRDLTIGGVLCRAATGFTASEA CCCCCHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCCEEHHHHEEHHCCCCCHHCC TSRFDLAVDGGEISGAFSDDSLSEADLAAGRYDAAGVATWLVDWSDVSLRILIARGTIGE CCEEEEEEECCEEECCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHH VRREGAAFTAELRGLADALAQDSGRLFTARCGVDLGDGKCRVDLASSAFRRSGTVTAVEG HHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEHHHHHHCCCCEEEECC TSIVAVSGLSGLAAGWFTAGRLNWTGGANAGLAIEVKQHRVVAGVVRLSLWRAMAEPIAI CEEEEEECCCHHHHHHEECCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCEEE GDSFVVTAGCDKSFTTCRDRFANTSNFRGFPQIPGNDFVVSYPLPGSPDNGNGSKAL CCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRSIPSALQAKLDSGATTLARCWIVTRRDGVVLGFTDHDRDLTIGGVLCRAATGFTASEA CCCCCHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCCEEHHHHEEHHCCCCCHHCC TSRFDLAVDGGEISGAFSDDSLSEADLAAGRYDAAGVATWLVDWSDVSLRILIARGTIGE CCEEEEEEECCEEECCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHH VRREGAAFTAELRGLADALAQDSGRLFTARCGVDLGDGKCRVDLASSAFRRSGTVTAVEG HHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEHHHHHHCCCCEEEECC TSIVAVSGLSGLAAGWFTAGRLNWTGGANAGLAIEVKQHRVVAGVVRLSLWRAMAEPIAI CEEEEEECCCHHHHHHEECCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCEEE GDSFVVTAGCDKSFTTCRDRFANTSNFRGFPQIPGNDFVVSYPLPGSPDNGNGSKAL CCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA