| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675373
Identifier: 75675373
GI number: 75675373
Start: 1284527
End: 1284973
Strand: Direct
Name: 75675373
Synonym: Nwi_1180
Alternate gene names: NA
Gene position: 1284527-1284973 (Clockwise)
Preceding gene: 75675372
Following gene: 75675374
Centisome position: 37.76
GC content: 69.57
Gene sequence:
>447_bases GTGAGTTGTGTTTGCTCGACCCGCGCGGCCATCGTCGCCGAGGCGCGCGGCTGGATCGGCACGCCCTATCGGCATCAGGC CTCGCTCAAGGGCGTCGGCTGCGATTGCCTCGGCCTGGTGCGCGGCGTCTGGCGCAACTGCATTGGCGATGAGCCGGAAA CGCCGCCGCCCTATGCGCCGGACTGGGCCGAGGCAAAAGGCGACGAGACGCTCGCCGCGGCGGCGCTGCGCCATCTCGTT CCCGTCGCGCGCGACGGCTTCGGGGCGGGCGACGTGCTGCTGTTCCGATGGCGTGACGGGTTCGTCGCCAAGCATGTCGC GATCGCATCGAGCGAGCACGCCATGGTCCATGCGCATGACGGCGCGGCTGTCTGCGAAATCGCGATCGCGCCGTGGTGGC GGCGGCGGCTGGCTTACGCATTTCGTTTTCCCGGAGTCTCGGACTGA
Upstream 100 bases:
>100_bases GTTTCCCCCAAATTCCCGGCAACGATTTCGTCGTCAGCTATCCGCTGCCGGGTTCGCCCGATAACGGCAACGGCAGCAAG GCACTGTGAAGGAGCCGCTC
Downstream 100 bases:
>100_bases TGGCAGCGCTGGTTCTTTCCGTCGCAGGCGGCGCCGCGGGCGCGTTGTTCGGGCCGGCAGGCGCGATCGCCGGGCGTCTC GCCGGCGCGCTGATCGGCAA
Product: putative phage cell wall peptidase, NlpC/P60
Products: NA
Alternate protein names: NlpC/P60 Family Phage Cell Wall Peptidase; Phage Cell Wall Peptidase NlpC/P; Phage Cell Wall Peptidase Of NlpC/P60 Family; Spr-Family Cell Wall-Associated Hydrolase; Phage Cell Wall Peptidase
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSCVCSTRAAIVAEARGWIGTPYRHQASLKGVGCDCLGLVRGVWRNCIGDEPETPPPYAPDWAEAKGDETLAAAALRHLV PVARDGFGAGDVLLFRWRDGFVAKHVAIASSEHAMVHAHDGAAVCEIAIAPWWRRRLAYAFRFPGVSD
Sequences:
>Translated_148_residues MSCVCSTRAAIVAEARGWIGTPYRHQASLKGVGCDCLGLVRGVWRNCIGDEPETPPPYAPDWAEAKGDETLAAAALRHLV PVARDGFGAGDVLLFRWRDGFVAKHVAIASSEHAMVHAHDGAAVCEIAIAPWWRRRLAYAFRFPGVSD >Mature_147_residues SCVCSTRAAIVAEARGWIGTPYRHQASLKGVGCDCLGLVRGVWRNCIGDEPETPPPYAPDWAEAKGDETLAAAALRHLVP VARDGFGAGDVLLFRWRDGFVAKHVAIASSEHAMVHAHDGAAVCEIAIAPWWRRRLAYAFRFPGVSD
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16024; Mature: 15893
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCVCSTRAAIVAEARGWIGTPYRHQASLKGVGCDCLGLVRGVWRNCIGDEPETPPPYAP CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DWAEAKGDETLAAAALRHLVPVARDGFGAGDVLLFRWRDGFVAKHVAIASSEHAMVHAHD CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHEECCCCCEEEEECC GAAVCEIAIAPWWRRRLAYAFRFPGVSD CCEEEEEECCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SCVCSTRAAIVAEARGWIGTPYRHQASLKGVGCDCLGLVRGVWRNCIGDEPETPPPYAP CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DWAEAKGDETLAAAALRHLVPVARDGFGAGDVLLFRWRDGFVAKHVAIASSEHAMVHAHD CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHEECCCCCEEEEECC GAAVCEIAIAPWWRRRLAYAFRFPGVSD CCEEEEEECCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA