| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is fljL [H]
Identifier: 75675297
GI number: 75675297
Start: 1215795
End: 1217366
Strand: Direct
Name: fljL [H]
Synonym: Nwi_1104
Alternate gene names: 75675297
Gene position: 1215795-1217366 (Clockwise)
Preceding gene: 75675295
Following gene: 75675298
Centisome position: 35.74
GC content: 63.99
Gene sequence:
>1572_bases ATGTCCGATATTGTTCTCTCCGCATCGGTACGCCAGAATCTGCTTTCGCTTCAGTCGACGGCTGAACTGCTCTCGACGAC CCAGACCCGCCTTGCCACCGGCAAGAAGGTGAACTCGGCGCTTGATAATCCGACGAACTTCTTCACCGCCGCCGGCCTCG ACGCCCGCGCCAGCGACATCAACAACCTTCTGGATTCGATCGGCAACGGCGTGCAGGTGCTGCAGGCCGCCAATACGGGT ATCACCTCGCTGCAGAAGCTGGTCGATACCGCGAAGTCGATCGCCAACCAGGCGCTGCAGGCGACCTCGGGCTATTCCAC CAAGTCGCAGGCGACCACCGCCGCCATCACCGGCGCGACGGCCGACAACCTGCTCGGGCCGGGTGGCGCTCCGACCGATG CTGCCGCTACTCCCGGCTCTGTCGTCAACAACAGCCTGACCGTTCCCGCACCGATCACCGCGGCGACGACGTTGTCTGGC GGTGTGAATACCGACTCGCTCGCCACGGACTTCATTGCTGGCGATACGATCGTCGTCAACGGCACGACGATCAATTTCGT GGCTTCCGGCGCTACCGGCAACGACCTCAACATCACCGACACCGTCGGCGACGTGTTGGCCAGGATTGACTCGATCACGG GCGGTACGTCCACCATCTCCGGCGGTGCGATTACGCTTCACACCGGCACGGCCAGCGATCTGACCATCAGCGGCTCGGGC CTTGCCAAGCTCGGTTTGACCGCGGGCACCACCGCGCGAACCCCCGGCGCTCCGGCCGCGCTCGACGGCAAGACGCTAAC GATTGGCGCAACCGATGGCGGCACGGCGACCAGCATCACGTTTGGTACCGGCACCGGCCAGATCAATACGCTCGACCAGT TGAACACGGCGCTCGCCGCGAACAACCTGACCGCCTCGATCAACTCGGCGGGCGCGATCACCTTCACCACGACCAACGAT CACGCGTCCGCGACGATCGGTGCGTTTGGTGGCGATGCGACCACCGATCCGAATACGTTCGGCGCGATGACGGCTTCCGC TCCGGTCGAGGACGCCAACGCGCAGAACACCCGCGCCACGCTGATTGGCCAGTACAATCAGGTCATCGACCAGATCCGCA CCACCGCGCAGGATGCTTCCTTCAACGGCATCAACCTGCTCAACGGTGACCAGCTCAAGCTGGTGTTCAACGAAACCGGC AAATCGACGCTGACCATCCAGGGCGTGACCTTCGATCCGGCGGGCCTCGGCCTGTCGTCGCTGGCCAAGGGCACGGACTT CCTGGACAACGCTTCGACCAACGCCGTTCTGGACTCGCTCAACACCGCGTCCAGCACGCTGCGCTCGCAGGCGTCGACCT TCGGTTCCAACCTGTCGATCGTGCAGATCCGTCAGGACTTCTCGAAGAACCTGATCAACGTGCTGCAGACGGGATCGGCG AACCTGACGCTTGCCGATACCAACGAGGAAGCGGCGAACAGCCAGGCGCTGGCCACCCGCCAGTCGATCGCGGTGTCGGC GCTGGCGCTGGCCAACCAGTCGCAGCAGAGCGTGTTGCAACTGCTCCGCTGA
Upstream 100 bases:
>100_bases TTCATGTTTTCTTAGAGTCTTCCCATCACTGTGGCGCCTCGTCCGAGGAAGGTCTTCGGCCTGTGGACGTAAGTATATTC ACACCAGAAAGGTATGAAAG
Downstream 100 bases:
>100_bases TCCAAGCGACATCTCAGGACGACGAAACGGCGGGGGAAACCCCGCCGTTTTTTTGTCAGCCGGGCGAGTTTTCTTCTCCT GAATTCGACTGTCGGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: 27 kDa flagellin [H]
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MSDIVLSASVRQNLLSLQSTAELLSTTQTRLATGKKVNSALDNPTNFFTAAGLDARASDINNLLDSIGNGVQVLQAANTG ITSLQKLVDTAKSIANQALQATSGYSTKSQATTAAITGATADNLLGPGGAPTDAAATPGSVVNNSLTVPAPITAATTLSG GVNTDSLATDFIAGDTIVVNGTTINFVASGATGNDLNITDTVGDVLARIDSITGGTSTISGGAITLHTGTASDLTISGSG LAKLGLTAGTTARTPGAPAALDGKTLTIGATDGGTATSITFGTGTGQINTLDQLNTALAANNLTASINSAGAITFTTTND HASATIGAFGGDATTDPNTFGAMTASAPVEDANAQNTRATLIGQYNQVIDQIRTTAQDASFNGINLLNGDQLKLVFNETG KSTLTIQGVTFDPAGLGLSSLAKGTDFLDNASTNAVLDSLNTASSTLRSQASTFGSNLSIVQIRQDFSKNLINVLQTGSA NLTLADTNEEAANSQALATRQSIAVSALALANQSQQSVLQLLR
Sequences:
>Translated_523_residues MSDIVLSASVRQNLLSLQSTAELLSTTQTRLATGKKVNSALDNPTNFFTAAGLDARASDINNLLDSIGNGVQVLQAANTG ITSLQKLVDTAKSIANQALQATSGYSTKSQATTAAITGATADNLLGPGGAPTDAAATPGSVVNNSLTVPAPITAATTLSG GVNTDSLATDFIAGDTIVVNGTTINFVASGATGNDLNITDTVGDVLARIDSITGGTSTISGGAITLHTGTASDLTISGSG LAKLGLTAGTTARTPGAPAALDGKTLTIGATDGGTATSITFGTGTGQINTLDQLNTALAANNLTASINSAGAITFTTTND HASATIGAFGGDATTDPNTFGAMTASAPVEDANAQNTRATLIGQYNQVIDQIRTTAQDASFNGINLLNGDQLKLVFNETG KSTLTIQGVTFDPAGLGLSSLAKGTDFLDNASTNAVLDSLNTASSTLRSQASTFGSNLSIVQIRQDFSKNLINVLQTGSA NLTLADTNEEAANSQALATRQSIAVSALALANQSQQSVLQLLR >Mature_522_residues SDIVLSASVRQNLLSLQSTAELLSTTQTRLATGKKVNSALDNPTNFFTAAGLDARASDINNLLDSIGNGVQVLQAANTGI TSLQKLVDTAKSIANQALQATSGYSTKSQATTAAITGATADNLLGPGGAPTDAAATPGSVVNNSLTVPAPITAATTLSGG VNTDSLATDFIAGDTIVVNGTTINFVASGATGNDLNITDTVGDVLARIDSITGGTSTISGGAITLHTGTASDLTISGSGL AKLGLTAGTTARTPGAPAALDGKTLTIGATDGGTATSITFGTGTGQINTLDQLNTALAANNLTASINSAGAITFTTTNDH ASATIGAFGGDATTDPNTFGAMTASAPVEDANAQNTRATLIGQYNQVIDQIRTTAQDASFNGINLLNGDQLKLVFNETGK STLTIQGVTFDPAGLGLSSLAKGTDFLDNASTNAVLDSLNTASSTLRSQASTFGSNLSIVQIRQDFSKNLINVLQTGSAN LTLADTNEEAANSQALATRQSIAVSALALANQSQQSVLQLLR
Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 52406; Mature: 52275
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIVLSASVRQNLLSLQSTAELLSTTQTRLATGKKVNSALDNPTNFFTAAGLDARASDI CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCHHHHH NNLLDSIGNGVQVLQAANTGITSLQKLVDTAKSIANQALQATSGYSTKSQATTAAITGAT HHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC ADNLLGPGGAPTDAAATPGSVVNNSLTVPAPITAATTLSGGVNTDSLATDFIAGDTIVVN HHHCCCCCCCCCCCCCCCCHHHCCCEECCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEE GTTINFVASGATGNDLNITDTVGDVLARIDSITGGTSTISGGAITLHTGTASDLTISGSG CCEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCCCEEECCCC LAKLGLTAGTTARTPGAPAALDGKTLTIGATDGGTATSITFGTGTGQINTLDQLNTALAA CEEECCCCCCCCCCCCCCCEECCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHH NNLTASINSAGAITFTTTNDHASATIGAFGGDATTDPNTFGAMTASAPVEDANAQNTRAT CCCEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHH LIGQYNQVIDQIRTTAQDASFNGINLLNGDQLKLVFNETGKSTLTIQGVTFDPAGLGLSS HHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCEEEEEEEEEECCCCCCHHH LAKGTDFLDNASTNAVLDSLNTASSTLRSQASTFGSNLSIVQIRQDFSKNLINVLQTGSA HHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCC NLTLADTNEEAANSQALATRQSIAVSALALANQSQQSVLQLLR EEEEECCCCHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC >Mature Secondary Structure SDIVLSASVRQNLLSLQSTAELLSTTQTRLATGKKVNSALDNPTNFFTAAGLDARASDI CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCHHHHH NNLLDSIGNGVQVLQAANTGITSLQKLVDTAKSIANQALQATSGYSTKSQATTAAITGAT HHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC ADNLLGPGGAPTDAAATPGSVVNNSLTVPAPITAATTLSGGVNTDSLATDFIAGDTIVVN HHHCCCCCCCCCCCCCCCCHHHCCCEECCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEE GTTINFVASGATGNDLNITDTVGDVLARIDSITGGTSTISGGAITLHTGTASDLTISGSG CCEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCCCEEECCCC LAKLGLTAGTTARTPGAPAALDGKTLTIGATDGGTATSITFGTGTGQINTLDQLNTALAA CEEECCCCCCCCCCCCCCCEECCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHH NNLTASINSAGAITFTTTNDHASATIGAFGGDATTDPNTFGAMTASAPVEDANAQNTRAT CCCEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHH LIGQYNQVIDQIRTTAQDASFNGINLLNGDQLKLVFNETGKSTLTIQGVTFDPAGLGLSS HHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCEEEEEEEEEECCCCCCHHH LAKGTDFLDNASTNAVLDSLNTASSTLRSQASTFGSNLSIVQIRQDFSKNLINVLQTGSA HHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCC NLTLADTNEEAANSQALATRQSIAVSALALANQSQQSVLQLLR EEEEECCCCHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10940048; 11259647; 3469658; 1699845 [H]