| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is flgK [H]
Identifier: 75675293
GI number: 75675293
Start: 1209848
End: 1211716
Strand: Direct
Name: flgK [H]
Synonym: Nwi_1100
Alternate gene names: 75675293
Gene position: 1209848-1211716 (Clockwise)
Preceding gene: 75675292
Following gene: 75675294
Centisome position: 35.56
GC content: 65.6
Gene sequence:
>1869_bases ATGAGTTTGAGTTCGGCCCTCTCGATCGCAATGTCCGGCCTGCGCGCCAACCAGGCCGCGCTGTCGATCGTGTCCGGCAA CGTCGCCAACGCGAACACGCCGGGCTACGTTGCGCAGACGCTGGTGCAGGACCAGGTCGTGACCGGCGGCATGGGTTCCG GCGTCCGCGTTATCGGGGTCAACCGCACGCTCGACGCCTATGTGCAGTCGCAACTGCGCACGGAAAATGCCGGCGGCGCT TATGCGAGCCACATCGCCGGGGTGCTCGGCCAGTTGCAGAACGTCTATGGCACGCCGGGCAACGACGGCACGCTGGAGGC GGCCTATAACCGGTTCACCTCGGCATTGCAGGCGCTGTCGGCGAGTTCGGGCAATCCGGCGGCGCAGTCGTCGGTGCTGA ATGCCGCGCAGGCGCTGGCGCACCAGCTCAACGCGACCACCAGCGGCATTCAGACGCTGCGATCCAACGCCGAGCAGAGC CTGTCCGCATCGGTCTCGCAGGCCAATGCGGCGATGCAGCAGATCGCGCAGCTCAATCAGCGGCTGCAAAGCATGGGTGC GCAGGATCCGGCGGCCGCGACGCTGATGGATCAGCGCGACGCCGCGATCGATCAGCTTTCAGGGTTGATGGACATCCGCG CGGTGACGGACGGCGCCAACCAGACCTCGGTGTTCACCACGGCCGGCGTCCAGCTCGTCGGCGGCGTTTATGCGTCGACG CTGACATTCAACGCGCAGTCCTCGCTCACCGCGAGTTCGCAATGGAACGCCGATCCCGCGAAGTCGAGCGTCGGCACCAT CATCTGCCAGCTTCCGAACGGCGCCAGGATCGACATGATCGCTTCGCAAGGCATCAACTCCGGCCAGATCGCCGCCGATG CCCAGTTGCGCGACAAGATTCTGGTGCAGGCGCAGAACCAGGTGGACCAGATGGCGGCGACGCTCGCCAGCGCGTTGTCC GACGTCACCACGAGCGGCGCGCCGGTGACCGGACCGCCATCGGGCTTCGACCTCGATCTGTCCGGCATTCTGCCGGGCAA CGCATTCCGCGTCACCTACACCGACTCCGCTAACGTCTCGTACACCGTCACCGTGGTGCGGGTGGACGATCCGTCCGCGC TGCCGATTCCGAACGCGGCCGCGAATCCGAACGACCGGGTGATCGGCGTCGATTTCTCGGGCGGGCTCGCCTCGGTCGTA TCGCAACTGAATGCGCAGATCGGGGCGGCGTCGCATCTGATGTTTTCCGCTTCCGGTTCGCTGTTACGGGTGGCCGACGA CGGCTCAGGACAATCCACGGTGAGCGCGGCATCGGCCACGACCACGGTGCAGTCGCTGGCGTCCGGCGATCCGCAACTGC CGTTCTTCACCGACCGCGCCTCGCTTTATACCGGCGCGATCACAGGCTCCGCGTCGCAGATCACGGGGTTGGCGGGGCGC ATTCAGGTCAACGCCGCGCTGCTCGCCGATCCCTCGAAGCTCACGGTCTACAGCACCTCGCCGGTAACGCCGGCCGGCGA CACCACGCGCGCCGACTTCATCTACGACAGGCTGACGTTCGCGAGCTTCAGCTACGCGCCTAACACCGGACTTGGCGCTG CGGCAGCGCCATTCCAGGGCACGCTGTCGTCATTCCTGCAGCAGTTCGTCAGCCTGCAGAGCGGCGCGGCGACGACGGCG CGGCAGGTCGCGCAGGGGCAGAGCATCGTCGTCAACACCTTGCAGGAGAAATTCGACGACAAGTCCGGCGTGAACATGGA TACCGAAATGGCCAATCTGATCGCTTTGCAGAACTCTTACGCGGCGAATGCGCACGTGATGACCGTGGTGCAGAGCATGA TGCAGACGCTGATGCAGGCGCAATGGTAA
Upstream 100 bases:
>100_bases CCAAGGTCATCACCACCGCGAACAGCATGGTTCAGGATCTGCTGAACGTGTTGCGCTAATCACGGGCGTGGATTGATCCG GCTTTGAGGCGGGCAAGAAG
Downstream 100 bases:
>100_bases CGACGGCGTAGGGCGGTTCGCATGGCGATCAACGGCATTAGCTTCGGCAACACGATCCTGGGCGGCTCGGTCCGGAATCT CAAGGCGCAGATGGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MSLSSALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQVVTGGMGSGVRVIGVNRTLDAYVQSQLRTENAGGA YASHIAGVLGQLQNVYGTPGNDGTLEAAYNRFTSALQALSASSGNPAAQSSVLNAAQALAHQLNATTSGIQTLRSNAEQS LSASVSQANAAMQQIAQLNQRLQSMGAQDPAAATLMDQRDAAIDQLSGLMDIRAVTDGANQTSVFTTAGVQLVGGVYAST LTFNAQSSLTASSQWNADPAKSSVGTIICQLPNGARIDMIASQGINSGQIAADAQLRDKILVQAQNQVDQMAATLASALS DVTTSGAPVTGPPSGFDLDLSGILPGNAFRVTYTDSANVSYTVTVVRVDDPSALPIPNAAANPNDRVIGVDFSGGLASVV SQLNAQIGAASHLMFSASGSLLRVADDGSGQSTVSAASATTTVQSLASGDPQLPFFTDRASLYTGAITGSASQITGLAGR IQVNAALLADPSKLTVYSTSPVTPAGDTTRADFIYDRLTFASFSYAPNTGLGAAAAPFQGTLSSFLQQFVSLQSGAATTA RQVAQGQSIVVNTLQEKFDDKSGVNMDTEMANLIALQNSYAANAHVMTVVQSMMQTLMQAQW
Sequences:
>Translated_622_residues MSLSSALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQVVTGGMGSGVRVIGVNRTLDAYVQSQLRTENAGGA YASHIAGVLGQLQNVYGTPGNDGTLEAAYNRFTSALQALSASSGNPAAQSSVLNAAQALAHQLNATTSGIQTLRSNAEQS LSASVSQANAAMQQIAQLNQRLQSMGAQDPAAATLMDQRDAAIDQLSGLMDIRAVTDGANQTSVFTTAGVQLVGGVYAST LTFNAQSSLTASSQWNADPAKSSVGTIICQLPNGARIDMIASQGINSGQIAADAQLRDKILVQAQNQVDQMAATLASALS DVTTSGAPVTGPPSGFDLDLSGILPGNAFRVTYTDSANVSYTVTVVRVDDPSALPIPNAAANPNDRVIGVDFSGGLASVV SQLNAQIGAASHLMFSASGSLLRVADDGSGQSTVSAASATTTVQSLASGDPQLPFFTDRASLYTGAITGSASQITGLAGR IQVNAALLADPSKLTVYSTSPVTPAGDTTRADFIYDRLTFASFSYAPNTGLGAAAAPFQGTLSSFLQQFVSLQSGAATTA RQVAQGQSIVVNTLQEKFDDKSGVNMDTEMANLIALQNSYAANAHVMTVVQSMMQTLMQAQW >Mature_621_residues SLSSALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQVVTGGMGSGVRVIGVNRTLDAYVQSQLRTENAGGAY ASHIAGVLGQLQNVYGTPGNDGTLEAAYNRFTSALQALSASSGNPAAQSSVLNAAQALAHQLNATTSGIQTLRSNAEQSL SASVSQANAAMQQIAQLNQRLQSMGAQDPAAATLMDQRDAAIDQLSGLMDIRAVTDGANQTSVFTTAGVQLVGGVYASTL TFNAQSSLTASSQWNADPAKSSVGTIICQLPNGARIDMIASQGINSGQIAADAQLRDKILVQAQNQVDQMAATLASALSD VTTSGAPVTGPPSGFDLDLSGILPGNAFRVTYTDSANVSYTVTVVRVDDPSALPIPNAAANPNDRVIGVDFSGGLASVVS QLNAQIGAASHLMFSASGSLLRVADDGSGQSTVSAASATTTVQSLASGDPQLPFFTDRASLYTGAITGSASQITGLAGRI QVNAALLADPSKLTVYSTSPVTPAGDTTRADFIYDRLTFASFSYAPNTGLGAAAAPFQGTLSSFLQQFVSLQSGAATTAR QVAQGQSIVVNTLQEKFDDKSGVNMDTEMANLIALQNSYAANAHVMTVVQSMMQTLMQAQW
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=346, Percent_Identity=28.3236994219653, Blast_Score=96, Evalue=8e-21,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 63645; Mature: 63514
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQVVTGGMGSGVRVIGV CCHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE NRTLDAYVQSQLRTENAGGAYASHIAGVLGQLQNVYGTPGNDGTLEAAYNRFTSALQALS CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ASSGNPAAQSSVLNAAQALAHQLNATTSGIQTLRSNAEQSLSASVSQANAAMQQIAQLNQ CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLQSMGAQDPAAATLMDQRDAAIDQLSGLMDIRAVTDGANQTSVFTTAGVQLVGGVYAST HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHE LTFNAQSSLTASSQWNADPAKSSVGTIICQLPNGARIDMIASQGINSGQIAADAQLRDKI EEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHCCCCCCCEEECHHHHHHH LVQAQNQVDQMAATLASALSDVTTSGAPVTGPPSGFDLDLSGILPGNAFRVTYTDSANVS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCEE YTVTVVRVDDPSALPIPNAAANPNDRVIGVDFSGGLASVVSQLNAQIGAASHLMFSASGS EEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCHHHHEEEECCCC LLRVADDGSGQSTVSAASATTTVQSLASGDPQLPFFTDRASLYTGAITGSASQITGLAGR EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHEEEEECCCHHHHHCCCCE IQVNAALLADPSKLTVYSTSPVTPAGDTTRADFIYDRLTFASFSYAPNTGLGAAAAPFQG EEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCHHH TLSSFLQQFVSLQSGAATTARQVAQGQSIVVNTLQEKFDDKSGVNMDTEMANLIALQNSY HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC AANAHVMTVVQSMMQTLMQAQW CCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLSSALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQVVTGGMGSGVRVIGV CHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE NRTLDAYVQSQLRTENAGGAYASHIAGVLGQLQNVYGTPGNDGTLEAAYNRFTSALQALS CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ASSGNPAAQSSVLNAAQALAHQLNATTSGIQTLRSNAEQSLSASVSQANAAMQQIAQLNQ CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLQSMGAQDPAAATLMDQRDAAIDQLSGLMDIRAVTDGANQTSVFTTAGVQLVGGVYAST HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHE LTFNAQSSLTASSQWNADPAKSSVGTIICQLPNGARIDMIASQGINSGQIAADAQLRDKI EEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHCCCCCCCEEECHHHHHHH LVQAQNQVDQMAATLASALSDVTTSGAPVTGPPSGFDLDLSGILPGNAFRVTYTDSANVS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCEE YTVTVVRVDDPSALPIPNAAANPNDRVIGVDFSGGLASVVSQLNAQIGAASHLMFSASGS EEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCHHHHEEEECCCC LLRVADDGSGQSTVSAASATTTVQSLASGDPQLPFFTDRASLYTGAITGSASQITGLAGR EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHEEEEECCCHHHHHCCCCE IQVNAALLADPSKLTVYSTSPVTPAGDTTRADFIYDRLTFASFSYAPNTGLGAAAAPFQG EEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCHHH TLSSFLQQFVSLQSGAATTARQVAQGQSIVVNTLQEKFDDKSGVNMDTEMANLIALQNSY HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC AANAHVMTVVQSMMQTLMQAQW CCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8045879 [H]