| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is ordL [H]
Identifier: 75675291
GI number: 75675291
Start: 1206403
End: 1207776
Strand: Direct
Name: ordL [H]
Synonym: Nwi_1098
Alternate gene names: 75675291
Gene position: 1206403-1207776 (Clockwise)
Preceding gene: 75675290
Following gene: 75675292
Centisome position: 35.46
GC content: 67.39
Gene sequence:
>1374_bases ATGACTTCGGACGGCATGGCTGCGGCCGATGGTCCCGGTGACACGGAGTCCGCTGTGCGGGCGCGGCGACGCGAGCGACT GACTTTCGATCTCGATGTCGAGATCTGCGTCGTCGGCGGCGGGCTGGCAGGCCTCACCGTGGCGCTGGAGGCGGCGAGGA CCGGCGCGAACGTGGTCGTGCTCGAGGGCCGCCATGTCGGCTGGAATGCGTCCGGCCATCATCTCGGCACGGTGATGCCC GGCTATGCGCTTCCGCTTTCCGACCTGATCGCGCGCGTCGGTTTTGATGATGCGTACGATCTCTGGTCGCTGGCGCGAGC GGGCGCCGATTATGTTCGCGCCCATGCCGCCGAGCACATCATTCCGGGACTCGGGCTCACGGAAGGCGTGCTCGAGGTTT CCAACGTCGATGCCGGCGAGCGGCTCATCAGCCATCTCCAGATGCTGAGCGAGGATTTTTCGACCGAGGTTGAGGGGTGG CAGATCGATCGCGTCCGCGACACCTTGCGCACCGGCCGGTATTTTCACGCGGTGCACTATCCGCGCGCCTTCCAGATCGA CGGACGCAAATATGTTCACGGCCTTGCCGAGCTTGCGCGCAAGGCCGGCGCACGCATCTTCGAAGATACGCCGGTGGTCG GCATTGATCCGTTCGGGATCAGGAAACGCATTGCAACGCCGCGCGCGCGTCTGCGGGCGTCCCACCTCGTGCTTGCGGGC AATGTCCATCTCGGCGGCGCATTGCGACGCTTGTCCGATACGCTGGTCCCGGTCTGGCGTTATGCCGGCGTCACCTCGCC GCTGGGAAACCGGCTCGCCGAGGTGATGACGTTTCAGGGGTCTGTCATCGACACCGATGGCATCGATCATTTTCGGATCG TCGAGGGCGACAGGCTGATGTGGGCGAGCCCGGAAACCACCTGGGAGGCGCGGCCGGGTCGCCAGAAAGCGGCGATCGGC AGGCGGATCGGCACGATCTTCCCGCAGCTTGGCGCGGTCGAGATCGCGAAGGTCTTCTGCGGCGCGGTCGGTCAGACCGT GCACGGGATGCCGCAGATCGGCCAGTTGCAACCGGGGCTTTGGGTGGCGAGCGGTTTCGGCCGGCAGGGACTGGGCACCT CGGCGATGGCCGGGCAACTGATCGCACGCGGCATGCTGGAAGGTGACGACCGCTGGCGGTTGTTCGCGCCGTTCGAACTC GTCTGGGCGGGCGGAAAGACCGGACGCGCGGCGGGCCATGCGATCGGCATGGCGATGCGGGCGCGTTCCGCCGCCGCCGG CACGCTGGCGCGTTATCGCGAGCGGGCGCGCATCAAGGCGCGGGAGCGGCAGGCGCGGCTCAACGCGGCGGATCGCAAGT CGAGGCCGCTTTGA
Upstream 100 bases:
>100_bases GATCGATTCATCATCGATCCAATCCATCAAATGCCGGGACTGAACACCTAGTCTACAACGTCGTACGGCGCAGGTCACAG GGGCAGTGGTAGGAAAAGCA
Downstream 100 bases:
>100_bases GATGCTGTCTCCCGGCAAGAGTTGCCGGGCGAGGCAAGAATGCTCCGGAGCCGGAGGCGAAGGCCAGATCCTAACTCACT GAAACAACGTCTCTTTGCTG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTSDGMAAADGPGDTESAVRARRRERLTFDLDVEICVVGGGLAGLTVALEAARTGANVVVLEGRHVGWNASGHHLGTVMP GYALPLSDLIARVGFDDAYDLWSLARAGADYVRAHAAEHIIPGLGLTEGVLEVSNVDAGERLISHLQMLSEDFSTEVEGW QIDRVRDTLRTGRYFHAVHYPRAFQIDGRKYVHGLAELARKAGARIFEDTPVVGIDPFGIRKRIATPRARLRASHLVLAG NVHLGGALRRLSDTLVPVWRYAGVTSPLGNRLAEVMTFQGSVIDTDGIDHFRIVEGDRLMWASPETTWEARPGRQKAAIG RRIGTIFPQLGAVEIAKVFCGAVGQTVHGMPQIGQLQPGLWVASGFGRQGLGTSAMAGQLIARGMLEGDDRWRLFAPFEL VWAGGKTGRAAGHAIGMAMRARSAAAGTLARYRERARIKARERQARLNAADRKSRPL
Sequences:
>Translated_457_residues MTSDGMAAADGPGDTESAVRARRRERLTFDLDVEICVVGGGLAGLTVALEAARTGANVVVLEGRHVGWNASGHHLGTVMP GYALPLSDLIARVGFDDAYDLWSLARAGADYVRAHAAEHIIPGLGLTEGVLEVSNVDAGERLISHLQMLSEDFSTEVEGW QIDRVRDTLRTGRYFHAVHYPRAFQIDGRKYVHGLAELARKAGARIFEDTPVVGIDPFGIRKRIATPRARLRASHLVLAG NVHLGGALRRLSDTLVPVWRYAGVTSPLGNRLAEVMTFQGSVIDTDGIDHFRIVEGDRLMWASPETTWEARPGRQKAAIG RRIGTIFPQLGAVEIAKVFCGAVGQTVHGMPQIGQLQPGLWVASGFGRQGLGTSAMAGQLIARGMLEGDDRWRLFAPFEL VWAGGKTGRAAGHAIGMAMRARSAAAGTLARYRERARIKARERQARLNAADRKSRPL >Mature_456_residues TSDGMAAADGPGDTESAVRARRRERLTFDLDVEICVVGGGLAGLTVALEAARTGANVVVLEGRHVGWNASGHHLGTVMPG YALPLSDLIARVGFDDAYDLWSLARAGADYVRAHAAEHIIPGLGLTEGVLEVSNVDAGERLISHLQMLSEDFSTEVEGWQ IDRVRDTLRTGRYFHAVHYPRAFQIDGRKYVHGLAELARKAGARIFEDTPVVGIDPFGIRKRIATPRARLRASHLVLAGN VHLGGALRRLSDTLVPVWRYAGVTSPLGNRLAEVMTFQGSVIDTDGIDHFRIVEGDRLMWASPETTWEARPGRQKAAIGR RIGTIFPQLGAVEIAKVFCGAVGQTVHGMPQIGQLQPGLWVASGFGRQGLGTSAMAGQLIARGMLEGDDRWRLFAPFELV WAGGKTGRAAGHAIGMAMRARSAAAGTLARYRERARIKARERQARLNAADRKSRPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=406, Percent_Identity=25.3694581280788, Blast_Score=112, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 49448; Mature: 49317
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDGMAAADGPGDTESAVRARRRERLTFDLDVEICVVGGGLAGLTVALEAARTGANVVV CCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECEEEEEECCCHHHHHHHHHHHCCCCCEEE LEGRHVGWNASGHHLGTVMPGYALPLSDLIARVGFDDAYDLWSLARAGADYVRAHAAEHI ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH IPGLGLTEGVLEVSNVDAGERLISHLQMLSEDFSTEVEGWQIDRVRDTLRTGRYFHAVHY CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCEEEEEEC PRAFQIDGRKYVHGLAELARKAGARIFEDTPVVGIDPFGIRKRIATPRARLRASHLVLAG CEEEEECCHHHHHHHHHHHHHHCCEEECCCCEECCCCHHHHHHHCCCHHHHHHCEEEEEC NVHLGGALRRLSDTLVPVWRYAGVTSPLGNRLAEVMTFQGSVIDTDGIDHFRIVEGDRLM CEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEE WASPETTWEARPGRQKAAIGRRIGTIFPQLGAVEIAKVFCGAVGQTVHGMPQIGQLQPGL EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE WVASGFGRQGLGTSAMAGQLIARGMLEGDDRWRLFAPFELVWAGGKTGRAAGHAIGMAMR EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHH ARSAAAGTLARYRERARIKARERQARLNAADRKSRPL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TSDGMAAADGPGDTESAVRARRRERLTFDLDVEICVVGGGLAGLTVALEAARTGANVVV CCCCCCCCCCCCCCHHHHHHHHHHCCEEEECEEEEEECCCHHHHHHHHHHHCCCCCEEE LEGRHVGWNASGHHLGTVMPGYALPLSDLIARVGFDDAYDLWSLARAGADYVRAHAAEHI ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH IPGLGLTEGVLEVSNVDAGERLISHLQMLSEDFSTEVEGWQIDRVRDTLRTGRYFHAVHY CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCEEEEEEC PRAFQIDGRKYVHGLAELARKAGARIFEDTPVVGIDPFGIRKRIATPRARLRASHLVLAG CEEEEECCHHHHHHHHHHHHHHCCEEECCCCEECCCCHHHHHHHCCCHHHHHHCEEEEEC NVHLGGALRRLSDTLVPVWRYAGVTSPLGNRLAEVMTFQGSVIDTDGIDHFRIVEGDRLM CEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEE WASPETTWEARPGRQKAAIGRRIGTIFPQLGAVEIAKVFCGAVGQTVHGMPQIGQLQPGL EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE WVASGFGRQGLGTSAMAGQLIARGMLEGDDRWRLFAPFELVWAGGKTGRAAGHAIGMAMR EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHH ARSAAAGTLARYRERARIKARERQARLNAADRKSRPL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]