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The map label for this gene is yfiO [C]

Identifier: 75675253

GI number: 75675253

Start: 1157771

End: 1158667

Strand: Direct

Name: yfiO [C]

Synonym: Nwi_1060

Alternate gene names: 75675253

Gene position: 1157771-1158667 (Clockwise)

Preceding gene: 75675252

Following gene: 75675254

Centisome position: 34.03

GC content: 62.76

Gene sequence:

>897_bases
ATGGCGCTCGGACGGCGCGTTTTCATGGACCGCGCCTCTCTCGGGCGGCTTGGCCGGAAACTGCGGCTCGCCGCCTGTCT
TGCACTCGCCGCCGTGACCGTTGCCGCGTGCGGGACCGGGCCGCTCCTGGACAAGTTCACGGCGAAGGACGAAGAGACCT
TCAGCGACGAACCGGCGGACAAGCTCTACAATGAGGGCTTGTTCCTCATGAACAAACAGCGCGATCTCAAGGCGGTCACG
AAGAAGTTCGACGAGGTCGACCGCGAACACCCGTATTCGGAGTGGGCGCGGAAGTCGCTGCTGATGTCGGCCTACGCATC
TTATCAGGCCGGCGATTACGACACCTGCATCGGCTCCGCGTCGCGCTACGTGACGCTCCATCCGGGCAGTCCGGACGCCG
CCTATGCGCAGTATTTGATTGCCGTCTCTAATTACGATCAGATCGCCGATGTCTCGCGCGACCAGGCTCGTACCGAGAAG
GCGATGCGCACCCTGGAAGAGGTGATCCGGAAATATCCGACGTCCGAATACGCCGGTGAAGCCAAGAAGAAGCTTCAGGG
CGCGCGCGATCAGCTCGCCGGCAAGGAAATGGCGGTCGGCCGCTACTACATGGAGCGGCGTGACTATACCGGCGCGATCA
ACCGCTTCAAGACGGTGGTGACGCGCTTCCAGACCACGCGGCACGTCGAGGAGGCGCTGGCGCGGCTGACCGAGGCCTAC
ATGGCGATTGGAATCGTTGCCGAGGCGCAGACCGCCGCGGCCGTGCTTGGCCATAATTTCCCTGACAGCCACTGGTACAA
GGACGCCTACAATCTCGTGACCTCGGGTGGAAGCCAGCCCAGCGAGAACAAGAGTTCGTGGATCAGCAAGGCGTTCAGGA
AGGTGGGCCTTGGCTAG

Upstream 100 bases:

>100_bases
TCTTGAGCTTCGCTTCTGATTCAATCAGAAATGAGAACTGCTCCACTGCCTGGATCGCCGGATGACGGACCTCGGATTTT
CACCAATGGTGGCTAAGCAT

Downstream 100 bases:

>100_bases
AGCATGATCCCGATTTTCGGATAAGATCATGCACAGTCACAAGGATGGGGCTGGAGTCCGGTTCAACGGAGTTGGGTCAG
GCTCCAGTCTTTGCGCTACG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MALGRRVFMDRASLGRLGRKLRLAACLALAAVTVAACGTGPLLDKFTAKDEETFSDEPADKLYNEGLFLMNKQRDLKAVT
KKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQYLIAVSNYDQIADVSRDQARTEK
AMRTLEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAVGRYYMERRDYTGAINRFKTVVTRFQTTRHVEEALARLTEAY
MAIGIVAEAQTAAAVLGHNFPDSHWYKDAYNLVTSGGSQPSENKSSWISKAFRKVGLG

Sequences:

>Translated_298_residues
MALGRRVFMDRASLGRLGRKLRLAACLALAAVTVAACGTGPLLDKFTAKDEETFSDEPADKLYNEGLFLMNKQRDLKAVT
KKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQYLIAVSNYDQIADVSRDQARTEK
AMRTLEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAVGRYYMERRDYTGAINRFKTVVTRFQTTRHVEEALARLTEAY
MAIGIVAEAQTAAAVLGHNFPDSHWYKDAYNLVTSGGSQPSENKSSWISKAFRKVGLG
>Mature_297_residues
ALGRRVFMDRASLGRLGRKLRLAACLALAAVTVAACGTGPLLDKFTAKDEETFSDEPADKLYNEGLFLMNKQRDLKAVTK
KFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQYLIAVSNYDQIADVSRDQARTEKA
MRTLEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAVGRYYMERRDYTGAINRFKTVVTRFQTTRHVEEALARLTEAYM
AIGIVAEAQTAAAVLGHNFPDSHWYKDAYNLVTSGGSQPSENKSSWISKAFRKVGLG

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=219, Percent_Identity=23.2876712328767, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33207; Mature: 33076

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGRRVFMDRASLGRLGRKLRLAACLALAAVTVAACGTGPLLDKFTAKDEETFSDEPAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCHH
KLYNEGLFLMNKQRDLKAVTKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSA
HHHHCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
SRYVTLHPGSPDAAYAQYLIAVSNYDQIADVSRDQARTEKAMRTLEEVIRKYPTSEYAGE
CCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AKKKLQGARDQLAGKEMAVGRYYMERRDYTGAINRFKTVVTRFQTTRHVEEALARLTEAY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAIGIVAEAQTAAAVLGHNFPDSHWYKDAYNLVTSGGSQPSENKSSWISKAFRKVGLG
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALGRRVFMDRASLGRLGRKLRLAACLALAAVTVAACGTGPLLDKFTAKDEETFSDEPAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCHH
KLYNEGLFLMNKQRDLKAVTKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSA
HHHHCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
SRYVTLHPGSPDAAYAQYLIAVSNYDQIADVSRDQARTEKAMRTLEEVIRKYPTSEYAGE
CCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AKKKLQGARDQLAGKEMAVGRYYMERRDYTGAINRFKTVVTRFQTTRHVEEALARLTEAY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAIGIVAEAQTAAAVLGHNFPDSHWYKDAYNLVTSGGSQPSENKSSWISKAFRKVGLG
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]