| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is fecR [H]
Identifier: 75675090
GI number: 75675090
Start: 973483
End: 974445
Strand: Direct
Name: fecR [H]
Synonym: Nwi_0895
Alternate gene names: 75675090
Gene position: 973483-974445 (Clockwise)
Preceding gene: 75675089
Following gene: 75675091
Centisome position: 28.61
GC content: 63.86
Gene sequence:
>963_bases ATGAGCCAGACCGGGCCAGATCAGTATCGCCTGATGGATGAAGCGATCGATCTCGTCATCCGCTTGCAGAACGACCCCGG AAATCCGGTCGCGACCGAGATGGTGAAAGTCTGGCGGGCGCGCAGCCCGGAGCATGAACGCATCTGGGCGCGGGTGGCCA AGGTTCACGGCGCTTCCGGCAAGATCCTGACCCAGCGCCGCAAGACTGAACGTCGTGAGAAACTGGGACTGACGCGCCGC AACCTCGTGATCGGCGGGCTCATCGGCCTTGGAACAGCCGGCGCCGGCTATTCAATCCTGCCCGAGATGCTGCTTCGCGG CTGGGCCGACCATATCACCGCCAAGGGCGAGATCCGCAGCGTCACGCTTGAAGACGGAAGCGTGGTGACGCTCGGGCCGG ATAGCGCCATTGCGGTGGATTTCACCACCCATTTTCGCCGTGTTCAGCTTCTGGCCGGCATGTCGTTCTTCGACGTCGCG GCCGAACCGCAGCGAGCCTTCACCGTGCAGGCTGCGGAGCTGACGGCAACGGCGCTTGGCACGGCCTTCGATGTCGCCCA CGACGCCGGCATGCTCTCGATCTCGGTCGATCATGGCGTCGTCGAAGCGCGGGCGTCGGGTTCGGCGATCGCGGCTGGCA CGAAGCTTTCCGCCGGAGAATGGGTGACGTTCGATAGCGCGACCTATGCGATCGAGCGCGGATCGCGCGAAGCGGGTCAG ATCGCGTCGTGGCGCGACAATCTGATCATGGCCGAGAAGGAAGCGGTCTCGGTGTTGGTGGCGCGCATCGGCCGCTGGAT TCCGGGGCGGATCGTCATGGCCGATCCCTTCATCGGTTCGCAGCGGGTGAGCGGAATCTTTGATTTGAATAATCCGAAAC GGGCGCTTGAGGCCGTCGTGCATCCGGCCGGCGCTCATGTCCGGCAGGTCTCGTCCTACCTGACGGTGATTTCTCTCATC TGA
Upstream 100 bases:
>100_bases CAAAAGATAAGCGACAAGTCTGATTCAACGCGGTTGAAATAGACTCTAGAAGGGTAGGCGCGATTCTCGAAATGTCTCGC CGCCTGACGAAGGAATATGA
Downstream 100 bases:
>100_bases AAAAAGTTTCGCGAGCACGTAAAAAAACTTCGGCCCCGATTGTATCAGCTATAGGGGTTGGCGCCGTCCATGCATTTTGA CGCCGCGAGCCCTCCTGACG
Product: FecR protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSQTGPDQYRLMDEAIDLVIRLQNDPGNPVATEMVKVWRARSPEHERIWARVAKVHGASGKILTQRRKTERREKLGLTRR NLVIGGLIGLGTAGAGYSILPEMLLRGWADHITAKGEIRSVTLEDGSVVTLGPDSAIAVDFTTHFRRVQLLAGMSFFDVA AEPQRAFTVQAAELTATALGTAFDVAHDAGMLSISVDHGVVEARASGSAIAAGTKLSAGEWVTFDSATYAIERGSREAGQ IASWRDNLIMAEKEAVSVLVARIGRWIPGRIVMADPFIGSQRVSGIFDLNNPKRALEAVVHPAGAHVRQVSSYLTVISLI
Sequences:
>Translated_320_residues MSQTGPDQYRLMDEAIDLVIRLQNDPGNPVATEMVKVWRARSPEHERIWARVAKVHGASGKILTQRRKTERREKLGLTRR NLVIGGLIGLGTAGAGYSILPEMLLRGWADHITAKGEIRSVTLEDGSVVTLGPDSAIAVDFTTHFRRVQLLAGMSFFDVA AEPQRAFTVQAAELTATALGTAFDVAHDAGMLSISVDHGVVEARASGSAIAAGTKLSAGEWVTFDSATYAIERGSREAGQ IASWRDNLIMAEKEAVSVLVARIGRWIPGRIVMADPFIGSQRVSGIFDLNNPKRALEAVVHPAGAHVRQVSSYLTVISLI >Mature_319_residues SQTGPDQYRLMDEAIDLVIRLQNDPGNPVATEMVKVWRARSPEHERIWARVAKVHGASGKILTQRRKTERREKLGLTRRN LVIGGLIGLGTAGAGYSILPEMLLRGWADHITAKGEIRSVTLEDGSVVTLGPDSAIAVDFTTHFRRVQLLAGMSFFDVAA EPQRAFTVQAAELTATALGTAFDVAHDAGMLSISVDHGVVEARASGSAIAAGTKLSAGEWVTFDSATYAIERGSREAGQI ASWRDNLIMAEKEAVSVLVARIGRWIPGRIVMADPFIGSQRVSGIFDLNNPKRALEAVVHPAGAHVRQVSSYLTVISLI
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=212, Percent_Identity=29.7169811320755, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 34542; Mature: 34411
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTGPDQYRLMDEAIDLVIRLQNDPGNPVATEMVKVWRARSPEHERIWARVAKVHGASG CCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC KILTQRRKTERREKLGLTRRNLVIGGLIGLGTAGAGYSILPEMLLRGWADHITAKGEIRS CCHHHHHHHHHHHHHCCCHHHEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE VTLEDGSVVTLGPDSAIAVDFTTHFRRVQLLAGMSFFDVAAEPQRAFTVQAAELTATALG EEECCCCEEEECCCCEEEEEHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEHHHHHHHHHH TAFDVAHDAGMLSISVDHGVVEARASGSAIAAGTKLSAGEWVTFDSATYAIERGSREAGQ HHHHHHHCCCEEEEEECCCEEEECCCCCEEECCCCCCCCCEEEECCCEEEEECCCCCCCC IASWRDNLIMAEKEAVSVLVARIGRWIPGRIVMADPFIGSQRVSGIFDLNNPKRALEAVV HHHHHCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHCCEEEECCCHHHHHHHHH HPAGAHVRQVSSYLTVISLI CCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SQTGPDQYRLMDEAIDLVIRLQNDPGNPVATEMVKVWRARSPEHERIWARVAKVHGASG CCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC KILTQRRKTERREKLGLTRRNLVIGGLIGLGTAGAGYSILPEMLLRGWADHITAKGEIRS CCHHHHHHHHHHHHHCCCHHHEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE VTLEDGSVVTLGPDSAIAVDFTTHFRRVQLLAGMSFFDVAAEPQRAFTVQAAELTATALG EEECCCCEEEECCCCEEEEEHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEHHHHHHHHHH TAFDVAHDAGMLSISVDHGVVEARASGSAIAAGTKLSAGEWVTFDSATYAIERGSREAGQ HHHHHHHCCCEEEEEECCCEEEECCCCCEEECCCCCCCCCEEEECCCEEEEECCCCCCCC IASWRDNLIMAEKEAVSVLVARIGRWIPGRIVMADPFIGSQRVSGIFDLNNPKRALEAVV HHHHHCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHCCEEEECCCHHHHHHHHH HPAGAHVRQVSSYLTVISLI CCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]