| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675091
Identifier: 75675091
GI number: 75675091
Start: 974569
End: 975018
Strand: Direct
Name: 75675091
Synonym: Nwi_0896
Alternate gene names: NA
Gene position: 974569-975018 (Clockwise)
Preceding gene: 75675090
Following gene: 75675092
Centisome position: 28.65
GC content: 67.33
Gene sequence:
>450_bases ATGGGGTACGCGGCTCGAACGTTTTCTGGCAAGGCCGGCATCGGCAGGGTGTTGGCATCGGCGTTGATGATGAGCACGGC GATCATCGCAGGCGTTGTCATGACTGGCGGCGACGCCTTTGCGCAGAGCGCGGCACAGACGTCGTTCAATGTGCCGGCCG GTCCGCTCGGTCGGGTGCTGACGGCATTCGGCCGTCAGGCCGGCCTGCAAGTAACTTATCTGACGAGCATCGGGACCGGA AAGACGTCGCCGGGCATTTCAGGCCCGGCCACGCGCGAGCAGGCGCTTGCGCGCATCCTCCAGGGCACGGGGCTGAGCTA TCACTTCACCAACGCCACCACCGTTGCGATCTCGCAGCCGGCGGCCGCTGGCGGCGCTGGTGCGGCTCCCGCCGGGCGAT CTCGCTCGATACGATCGATGTGCAGGGCGAGACCGCGTGGGGTCCGGTGA
Upstream 100 bases:
>100_bases AAAACTTCGGCCCCGATTGTATCAGCTATAGGGGTTGGCGCCGTCCATGCATTTTGACGCCGCGAGCCCTCCTGACGAGA CAATTGGGGTGGCATTGGTC
Downstream 100 bases:
>100_bases ACGGCTTTGTCGCCAGCCGCAGCGCTACCGCCACTAAGACCGACACGCCGATCATCGAGGTGCCACAGTCGATCTCGGTC GTGACGCGCGACCAGATCGA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor; NB-Dependent Heme/Hemoglobin Receptor Family Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MGYAARTFSGKAGIGRVLASALMMSTAIIAGVVMTGGDAFAQSAAQTSFNVPAGPLGRVLTAFGRQAGLQVTYLTSIGTG KTSPGISGPATREQALARILQGTGLSYHFTNATTVAISQPAAAGGAGAAPAGRSRSIRSMCRARPRGVR
Sequences:
>Translated_149_residues MGYAARTFSGKAGIGRVLASALMMSTAIIAGVVMTGGDAFAQSAAQTSFNVPAGPLGRVLTAFGRQAGLQVTYLTSIGTG KTSPGISGPATREQALARILQGTGLSYHFTNATTVAISQPAAAGGAGAAPAGRSRSIRSMCRARPRGVR >Mature_148_residues GYAARTFSGKAGIGRVLASALMMSTAIIAGVVMTGGDAFAQSAAQTSFNVPAGPLGRVLTAFGRQAGLQVTYLTSIGTGK TSPGISGPATREQALARILQGTGLSYHFTNATTVAISQPAAAGGAGAAPAGRSRSIRSMCRARPRGVR
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14914; Mature: 14783
Theoretical pI: Translated: 12.44; Mature: 12.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYAARTFSGKAGIGRVLASALMMSTAIIAGVVMTGGDAFAQSAAQTSFNVPAGPLGRVL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHH TAFGRQAGLQVTYLTSIGTGKTSPGISGPATREQALARILQGTGLSYHFTNATTVAISQP HHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEECC AAAGGAGAAPAGRSRSIRSMCRARPRGVR CCCCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure GYAARTFSGKAGIGRVLASALMMSTAIIAGVVMTGGDAFAQSAAQTSFNVPAGPLGRVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHH TAFGRQAGLQVTYLTSIGTGKTSPGISGPATREQALARILQGTGLSYHFTNATTVAISQP HHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEECC AAAGGAGAAPAGRSRSIRSMCRARPRGVR CCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA