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The map label for this gene is fecI [C]

Identifier: 75675089

GI number: 75675089

Start: 972786

End: 973283

Strand: Direct

Name: fecI [C]

Synonym: Nwi_0894

Alternate gene names: 75675089

Gene position: 972786-973283 (Clockwise)

Preceding gene: 75675087

Following gene: 75675090

Centisome position: 28.59

GC content: 61.45

Gene sequence:

>498_bases
ATGACGTGGGATCTGCAAAAGCTGTTCATTCGGCACGCGCGGGAGATTGATCGCTTTCTCCGCCGCCGCGGCCACAATGC
CGAGACGGCTGCCGATATTACCCAGGATACGTTCCTGCGCGTGCTGGCCTCGCCGCCGGGCGAGGCTCGGACCAACCACA
ATCCGAAAGCCTATCTCTATCAGGTGTCGCGCAGCCTCAGCATCAATCACCTGCGCCGCGAAAGCCTGATACAGACGACT
GATCTTGATGAGGCGGGCGCTATCGCCGATCCAACGCCGTCAGCCGAGAAGATCATCTACTCACGGCAATGTCTGGCGCA
GACGCGCAAAGCCCTCGCCGAATTGCCGGAACGCACCCGGATGGCCTTTGAGATGCACCGGCTCTGCGACAAGACCATCC
AGGAAGTGGCCGACGAGCTGGGCGTCTCGACCAGCCGGGCCTGGAAGCTGATCCGGAATGGCTATCGGCATCTCCTGACG
CGGGTGGACGATTTCTGA

Upstream 100 bases:

>100_bases
TGGTTCATTCGGGGTTCGCATCCAACCCGGTTCATCGGCTTCCGCTGGCTGGATTTTCCGGCCGCGCGAATGTCGTCGGC
GTGTGCCTTGCGGGGCGCCG

Downstream 100 bases:

>100_bases
GTTTTTTTCGTCTCTGGCGTGAAATTCGACGCTGCCTGTTTGTATTAGAGCATGATCCCGAGAAGTGGAAACCGGCTTTC
GGAGAAGATCATGCTCAAGC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma-; RNA Polymerase Sigma Factor FecI; Extracytoplasmic-Function Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family; Extracytoplasmic-Function Sigma-70 Factor PvdS; RNA Polymerase Sigma Factor; RNA Polymerase ECF-Subfamily Sigma-70 Factor; RNA Polymerase Sigma-70 Family Protein; RNA Polymerase Sigma-24 Factor; ECF Subfamily RNA Polymerase Sigma-70 Factor; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Family Sigma Factor; RNA Polymerase Sigma Factor FECI Protein; FecI-Like Sigma-; Sigma Factor FecI Family; Ferric Regulator Sigma-24 Subunit; DNA-Directed RNA Polymerase Sigma-E/Sigma-24/FecI; FecI Like Protein; Extracytoplasmic Function Sigma Factor Protein; RNA Polymerase Sigma Factor Protein; Fec I Like Protein; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma-70 Factor; FecI-Like Protein

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTWDLQKLFIRHAREIDRFLRRRGHNAETAADITQDTFLRVLASPPGEARTNHNPKAYLYQVSRSLSINHLRRESLIQTT
DLDEAGAIADPTPSAEKIIYSRQCLAQTRKALAELPERTRMAFEMHRLCDKTIQEVADELGVSTSRAWKLIRNGYRHLLT
RVDDF

Sequences:

>Translated_165_residues
MTWDLQKLFIRHAREIDRFLRRRGHNAETAADITQDTFLRVLASPPGEARTNHNPKAYLYQVSRSLSINHLRRESLIQTT
DLDEAGAIADPTPSAEKIIYSRQCLAQTRKALAELPERTRMAFEMHRLCDKTIQEVADELGVSTSRAWKLIRNGYRHLLT
RVDDF
>Mature_164_residues
TWDLQKLFIRHAREIDRFLRRRGHNAETAADITQDTFLRVLASPPGEARTNHNPKAYLYQVSRSLSINHLRRESLIQTTD
LDEAGAIADPTPSAEKIIYSRQCLAQTRKALAELPERTRMAFEMHRLCDKTIQEVADELGVSTSRAWKLIRNGYRHLLTR
VDDF

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19087; Mature: 18956

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWDLQKLFIRHAREIDRFLRRRGHNAETAADITQDTFLRVLASPPGEARTNHNPKAYLY
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
QVSRSLSINHLRRESLIQTTDLDEAGAIADPTPSAEKIIYSRQCLAQTRKALAELPERTR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH
MAFEMHRLCDKTIQEVADELGVSTSRAWKLIRNGYRHLLTRVDDF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TWDLQKLFIRHAREIDRFLRRRGHNAETAADITQDTFLRVLASPPGEARTNHNPKAYLY
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
QVSRSLSINHLRRESLIQTTDLDEAGAIADPTPSAEKIIYSRQCLAQTRKALAELPERTR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH
MAFEMHRLCDKTIQEVADELGVSTSRAWKLIRNGYRHLLTRVDDF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA