Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75675049

Identifier: 75675049

GI number: 75675049

Start: 929793

End: 930581

Strand: Direct

Name: 75675049

Synonym: Nwi_0854

Alternate gene names: NA

Gene position: 929793-930581 (Clockwise)

Preceding gene: 75675048

Following gene: 75675050

Centisome position: 27.33

GC content: 63.88

Gene sequence:

>789_bases
TTGCCTGTGGCCGGACGCCGGATGGCGTCTTTGGACCACGCCGGAATGCCTGTGATGATGCCCCGTGAATCCGATGGAGA
GATGCGCCGCGACGGTTCGAGCGCTGCCGATGTGCAGCCGAAACACCCCGTCGCCAAGATGTTCGGTCCGCAGACCGACG
ACGCTGACGTGAAGGATTTCACGGAGCGCTGCAAGGACGACCGGCATCACTTCAGGTTCATCGTGTCCCCCGAGGACGCG
AGCGACATGGAGGATCTGAAGCGGTTCACCCGCGAACTGATGACGCAGGCGGAAAAGGACCTCGGCACGAAACTCGAATG
GGTCGCCGTCGATCACTGGAATACCGACAACCCCCATGTCCACGTCATCGTGCGTGGTCGCGCCGATGATGGCCGCGACC
TTGTGATCGACCGCGACTATATCAAGAGCGGCATGCGTGACCGTGCGCAGGACCTCATTACGCAGGAACTTAGCCCGCGC
ACCGATCTCGACATCAGCCGCGCACTGAGCCGTCAGATCGAAGCCGAACGCTGGACCCAGCTCGACCGCCAGCTTGTCCG
TGACGCCAACGAGGAGGGCGTGATCGACGTGGCGCCGTCACCGGATCGCCAGCCCGACGCATACCTGACGCAGAAGGTCG
GGCGATTGCGCCACCTCGAACACCTCGGCCTTGCCGAGGCCATCGGCCCCGGCCAATGGGTCATGGCGGAAGGTGCGGAG
TCGACCTTGCGCGAACTCGGCCAGCGCAACGACATCATCAAGCGGATGCACCGCGCCCTCGACGAGTAG

Upstream 100 bases:

>100_bases
GCAGCCGCACGTCATGGTGACGACGGCCTTTTGAACAACGGAGCTCCACGCGAGCGGATGAGGACTGGTGCAGACCAAGG
ACGACGGGACGCACGTTATC

Downstream 100 bases:

>100_bases
GGCATCGCGCGCGGCGCGGCCGACTATGTCCTGGCCGGCGAGGCGCATGGCTCCCCGGTCATCGGCCGCCTGGTTGAACG
CGGTCTCGACAACGAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPVAGRRMASLDHAGMPVMMPRESDGEMRRDGSSAADVQPKHPVAKMFGPQTDDADVKDFTERCKDDRHHFRFIVSPEDA
SDMEDLKRFTRELMTQAEKDLGTKLEWVAVDHWNTDNPHVHVIVRGRADDGRDLVIDRDYIKSGMRDRAQDLITQELSPR
TDLDISRALSRQIEAERWTQLDRQLVRDANEEGVIDVAPSPDRQPDAYLTQKVGRLRHLEHLGLAEAIGPGQWVMAEGAE
STLRELGQRNDIIKRMHRALDE

Sequences:

>Translated_262_residues
MPVAGRRMASLDHAGMPVMMPRESDGEMRRDGSSAADVQPKHPVAKMFGPQTDDADVKDFTERCKDDRHHFRFIVSPEDA
SDMEDLKRFTRELMTQAEKDLGTKLEWVAVDHWNTDNPHVHVIVRGRADDGRDLVIDRDYIKSGMRDRAQDLITQELSPR
TDLDISRALSRQIEAERWTQLDRQLVRDANEEGVIDVAPSPDRQPDAYLTQKVGRLRHLEHLGLAEAIGPGQWVMAEGAE
STLRELGQRNDIIKRMHRALDE
>Mature_261_residues
PVAGRRMASLDHAGMPVMMPRESDGEMRRDGSSAADVQPKHPVAKMFGPQTDDADVKDFTERCKDDRHHFRFIVSPEDAS
DMEDLKRFTRELMTQAEKDLGTKLEWVAVDHWNTDNPHVHVIVRGRADDGRDLVIDRDYIKSGMRDRAQDLITQELSPRT
DLDISRALSRQIEAERWTQLDRQLVRDANEEGVIDVAPSPDRQPDAYLTQKVGRLRHLEHLGLAEAIGPGQWVMAEGAES
TLRELGQRNDIIKRMHRALDE

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29905; Mature: 29774

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVAGRRMASLDHAGMPVMMPRESDGEMRRDGSSAADVQPKHPVAKMFGPQTDDADVKDF
CCCCCCHHHHHCCCCCCEECCCCCCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHH
TERCKDDRHHFRFIVSPEDASDMEDLKRFTRELMTQAEKDLGTKLEWVAVDHWNTDNPHV
HHHHHCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEE
HVIVRGRADDGRDLVIDRDYIKSGMRDRAQDLITQELSPRTDLDISRALSRQIEAERWTQ
EEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LDRQLVRDANEEGVIDVAPSPDRQPDAYLTQKVGRLRHLEHLGLAEAIGPGQWVMAEGAE
HHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCHH
STLRELGQRNDIIKRMHRALDE
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVAGRRMASLDHAGMPVMMPRESDGEMRRDGSSAADVQPKHPVAKMFGPQTDDADVKDF
CCCCCHHHHHCCCCCCEECCCCCCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHH
TERCKDDRHHFRFIVSPEDASDMEDLKRFTRELMTQAEKDLGTKLEWVAVDHWNTDNPHV
HHHHHCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEE
HVIVRGRADDGRDLVIDRDYIKSGMRDRAQDLITQELSPRTDLDISRALSRQIEAERWTQ
EEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LDRQLVRDANEEGVIDVAPSPDRQPDAYLTQKVGRLRHLEHLGLAEAIGPGQWVMAEGAE
HHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCHH
STLRELGQRNDIIKRMHRALDE
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA