Click here to switch to the map view.

The map label for this gene is 75675050

Identifier: 75675050

GI number: 75675050

Start: 930678

End: 931334

Strand: Direct

Name: 75675050

Synonym: Nwi_0855

Alternate gene names: NA

Gene position: 930678-931334 (Clockwise)

Preceding gene: 75675049

Following gene: 75675051

Centisome position: 27.36

GC content: 66.67

Gene sequence:

>657_bases
TTGATCGGCACGGCCTATGCCGTGGTGGACGGCATCGACGGCCGCACCCACCATATCAAGCTGCCGGACATCGAGTCGTC
CGGCGACAGCGCGCCGGGCTCCATCGTGGAATTGCGATCGTTCGAGGATGCGAAGGGCAATCGGCGCGTGGCGTTGGCGG
CGCGCTCCGATCTGTCAATCGAAGCCCAGACCACGGCGAGCGGTGCGACCTGGCTCGATCGCCAGCTTGTCGCCCGCGAT
CCGGCCGATCTCGCCGGCGGCTTCGGCCTGGAGGTGAAGCAGGCGATGGAAGCGCGCGCCGAGCACTTGGTTCGGGAAGG
GATGGCGCGGCGCGATGGCGAGCGCATCCTGTTCAACCGGAACCTGATCGGCACGATCCGGCAACGCGAGCTGGATGTTC
TTGGTAACAGGCTCGCGACCGAGACCGGCGCCCCGTTCCAGAAATACGCTGACGGTGAATTTGTCGCCGGCGCCTACAGC
CGGCGCTTCGCGCTCGCGTCCGGCCGCTTCGCGATGATTGACGATGGCCTTGGCTTCAAGCTCGTGCCGTGGACGCCGTC
GATCGAGACACACATCGGTCAGCATATCTCCGGCGTCGGGCGTACCGATGGCGGCGTGGACTGGTCGTTCGGCCGCAAGC
GGGGGCTGGGGCTATGA

Upstream 100 bases:

>100_bases
GTAGGGCATCGCGCGCGGCGCGGCCGACTATGTCCTGGCCGGCGAGGCGCATGGCTCCCCGGTCATCGGCCGCCTGGTTG
AACGCGGTCTCGACAACGAA

Downstream 100 bases:

>100_bases
GGGGTGAGGTGGCCGGCTCGCGGCGGATGGCCTGGTCGCCGCGCACAAGAGCCTGATCTTGAATTCCAGGCCGGTCCGGC
ATATGTAGGTACTTGCCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIGTAYAVVDGIDGRTHHIKLPDIESSGDSAPGSIVELRSFEDAKGNRRVALAARSDLSIEAQTTASGATWLDRQLVARD
PADLAGGFGLEVKQAMEARAEHLVREGMARRDGERILFNRNLIGTIRQRELDVLGNRLATETGAPFQKYADGEFVAGAYS
RRFALASGRFAMIDDGLGFKLVPWTPSIETHIGQHISGVGRTDGGVDWSFGRKRGLGL

Sequences:

>Translated_218_residues
MIGTAYAVVDGIDGRTHHIKLPDIESSGDSAPGSIVELRSFEDAKGNRRVALAARSDLSIEAQTTASGATWLDRQLVARD
PADLAGGFGLEVKQAMEARAEHLVREGMARRDGERILFNRNLIGTIRQRELDVLGNRLATETGAPFQKYADGEFVAGAYS
RRFALASGRFAMIDDGLGFKLVPWTPSIETHIGQHISGVGRTDGGVDWSFGRKRGLGL
>Mature_218_residues
MIGTAYAVVDGIDGRTHHIKLPDIESSGDSAPGSIVELRSFEDAKGNRRVALAARSDLSIEAQTTASGATWLDRQLVARD
PADLAGGFGLEVKQAMEARAEHLVREGMARRDGERILFNRNLIGTIRQRELDVLGNRLATETGAPFQKYADGEFVAGAYS
RRFALASGRFAMIDDGLGFKLVPWTPSIETHIGQHISGVGRTDGGVDWSFGRKRGLGL

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23564; Mature: 23564

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTAYAVVDGIDGRTHHIKLPDIESSGDSAPGSIVELRSFEDAKGNRRVALAARSDLSI
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEE
EAQTTASGATWLDRQLVARDPADLAGGFGLEVKQAMEARAEHLVREGMARRDGERILFNR
EEECCCCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
NLIGTIRQRELDVLGNRLATETGAPFQKYADGEFVAGAYSRRFALASGRFAMIDDGLGFK
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEECHHHHEEEECCCCEEEEECCCCEE
LVPWTPSIETHIGQHISGVGRTDGGVDWSFGRKRGLGL
EECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGTAYAVVDGIDGRTHHIKLPDIESSGDSAPGSIVELRSFEDAKGNRRVALAARSDLSI
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEE
EAQTTASGATWLDRQLVARDPADLAGGFGLEVKQAMEARAEHLVREGMARRDGERILFNR
EEECCCCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
NLIGTIRQRELDVLGNRLATETGAPFQKYADGEFVAGAYSRRFALASGRFAMIDDGLGFK
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEECHHHHEEEECCCCEEEEECCCCEE
LVPWTPSIETHIGQHISGVGRTDGGVDWSFGRKRGLGL
EECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA