| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is nsrR [H]
Identifier: 75674940
GI number: 75674940
Start: 829423
End: 829875
Strand: Direct
Name: nsrR [H]
Synonym: Nwi_0743
Alternate gene names: 75674940
Gene position: 829423-829875 (Clockwise)
Preceding gene: 75674938
Following gene: 75674944
Centisome position: 24.38
GC content: 62.69
Gene sequence:
>453_bases ATGCGCCTCACCACCTATTCGGACTACGCGTTGCGGGTGCTGATGTATCTCGCGCTCAAGTCCGATGGGCTGTCGACCAT CGCCGAGATCGCCGGAAGCTATAACGTTTCCGAGGCTCACCTGATGAAGGTGGTTCATCAGCTGGGGGTGGCGGGATATA TCGAAACCGTGCGCGGTCGCGGCGGCGGACTGCGTCTCGCCAGGCCCGTCGAGGCGATCGGGCTGGCGGAAGTCATTCGC ATGACCGAGCCGGATATGGCGGTCGTGTCGTGCCTGAAGCCGCTGAACGCGCCCTGCAAGATCAATCCCTGTTGCGTGCT CAAGCGCGCGATGGAGCGCGCGCAGCAGGCTTTCATGGATGTGCTGGAAGGATATACGCTGGCCGATCTCGTGGTCCCCA GCGGCCGCCTTTCGAATCTGCTCGGCATCTCTCCGACCGCGTCGACGCAATAG
Upstream 100 bases:
>100_bases AAGCTCCTCTACAAAAGCCGGTGTTTCTATACATCGGCGGTTGCACAAAAGCAATATCTTGAATATAGCTTTTACGTGAC CATCTCGCGGGGAAGTATGC
Downstream 100 bases:
>100_bases AGCCTTTTCGCTTCTGATGTAATCAGAAGCGAGGCTCCATATTGTTGTTTTGACGCGTTTTCTTCATGCGAACCGGTATC CACTTCGCTTGAAAACGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MRLTTYSDYALRVLMYLALKSDGLSTIAEIAGSYNVSEAHLMKVVHQLGVAGYIETVRGRGGGLRLARPVEAIGLAEVIR MTEPDMAVVSCLKPLNAPCKINPCCVLKRAMERAQQAFMDVLEGYTLADLVVPSGRLSNLLGISPTASTQ
Sequences:
>Translated_150_residues MRLTTYSDYALRVLMYLALKSDGLSTIAEIAGSYNVSEAHLMKVVHQLGVAGYIETVRGRGGGLRLARPVEAIGLAEVIR MTEPDMAVVSCLKPLNAPCKINPCCVLKRAMERAQQAFMDVLEGYTLADLVVPSGRLSNLLGISPTASTQ >Mature_150_residues MRLTTYSDYALRVLMYLALKSDGLSTIAEIAGSYNVSEAHLMKVVHQLGVAGYIETVRGRGGGLRLARPVEAIGLAEVIR MTEPDMAVVSCLKPLNAPCKINPCCVLKRAMERAQQAFMDVLEGYTLADLVVPSGRLSNLLGISPTASTQ
Specific function: Nitric oxide-responsive transcriptional regulator [H]
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790621, Length=142, Percent_Identity=42.2535211267606, Blast_Score=120, Evalue=4e-29,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000944 - InterPro: IPR011991 [H]
Pfam domain/function: PF02082 Rrf2 [H]
EC number: NA
Molecular weight: Translated: 16154; Mature: 16154
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTTYSDYALRVLMYLALKSDGLSTIAEIAGSYNVSEAHLMKVVHQLGVAGYIETVRGR CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GGGLRLARPVEAIGLAEVIRMTEPDMAVVSCLKPLNAPCKINPCCVLKRAMERAQQAFMD CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VLEGYTLADLVVPSGRLSNLLGISPTASTQ HHCCCHHHHHHCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MRLTTYSDYALRVLMYLALKSDGLSTIAEIAGSYNVSEAHLMKVVHQLGVAGYIETVRGR CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GGGLRLARPVEAIGLAEVIRMTEPDMAVVSCLKPLNAPCKINPCCVLKRAMERAQQAFMD CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VLEGYTLADLVVPSGRLSNLLGISPTASTQ HHCCCHHHHHHCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA