| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is fecR [H]
Identifier: 75674921
GI number: 75674921
Start: 809694
End: 810686
Strand: Direct
Name: fecR [H]
Synonym: Nwi_0724
Alternate gene names: 75674921
Gene position: 809694-810686 (Clockwise)
Preceding gene: 75674920
Following gene: 75674922
Centisome position: 23.8
GC content: 64.85
Gene sequence:
>993_bases ATGGCCGTCCGCGAGAGGAGTCTGCCTGATGGTGGCCGATCCCGATTGGAGCGACGACGAGGATTTCGGCGGCACAACCT CGACAAGATATCGCGGGAAGCCGTGGCGTGGTTCGCAATCATGCACGCCGATCAGGTCGCGAAATCCGATCAGCTTGCCT TTCGCGCCTGGCTTCGACGGGACGAGCGTCATCGCGTGGCCTATGCGGATATCGAACGTCTTTGGTCGGGAGCTTCCGAA CTTCCGGTCGTCAAATCGCGTCGCCGCGAGAAGCGGATCGCCGTCACGCGGCGAACGTTCGGCGCGGGCATGCTCGCCGC CATGGCCGGCGGCGGCGGCTGGGTGGCGTATCAGCAGCATCCGTTCGCGGACTACCGCACCAGTGCCGGCGAGCGCAGGA CGGTCAGGCTCGCCGACGATTCAAGCGTGGACATGGCTGGCGCGACGGCGTTGTCCGTCGATTTCAGTTCCAAACTGCGT CTTGTCACGCTGCATCGGGGAGAGGCTTATTTCTCGGTTGCGCCGGATACGTCTCGCCCGTTCGTGGTCGAGGCGGCGGC GGGCCGCACGATGGCCGCCGGAACCGCGTTCAACGTCGACTATGTTTCCGATGACGACGTGCGCGTCACCGTTGCCCAGC ATGCTGTCGATATCCGCGTCGCCGCGGAGGGGGCGCGGCTGGATGCCGGATCGCAACTGACCTACGGCCGCGAAAGCATC GGCCCGCCTCAGGCGATCGATCCGGCTTCGGAGCTTGGCTGGCGCGACGGCCGCCTGATTTTCATCTCGCAGCCGTTCGG GCGGGTCGTCGCGTCGCTCAATCGCTGGCGGCAGGGCAGGCTGATGGTGATGGAATCGGCGTTGGCGGTCCGCCCGGTCA CCCTGATCGTCGATCTTCAGAAATCGGGGAATATTCTCGCCACTCTCGAAGACACGCTCCCGATCCGGGTCGTCAACGTC ACCCCCTATTTGACGCTGTTGTTCGCGGCATGA
Upstream 100 bases:
>100_bases AACGGCTCTATGATTTTGATTTAACGCGTTTTCTTCACGCGAACCGGTGTCCACTTCGCTTGAAAACGCTCTAGGATTTG GCCGGCTCCGGATCGTATCC
Downstream 100 bases:
>100_bases GCAGATTTTTTCTCCGGTCCATCTGATACCGGCGGGATCGCTTCGTCTGAACGAGTGAGGAGCGCGGAATTAAGGCCGAC GCTCATTTGTTCAGGGGAGC
Product: FecR protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MAVRERSLPDGGRSRLERRRGFRRHNLDKISREAVAWFAIMHADQVAKSDQLAFRAWLRRDERHRVAYADIERLWSGASE LPVVKSRRREKRIAVTRRTFGAGMLAAMAGGGGWVAYQQHPFADYRTSAGERRTVRLADDSSVDMAGATALSVDFSSKLR LVTLHRGEAYFSVAPDTSRPFVVEAAAGRTMAAGTAFNVDYVSDDDVRVTVAQHAVDIRVAAEGARLDAGSQLTYGRESI GPPQAIDPASELGWRDGRLIFISQPFGRVVASLNRWRQGRLMVMESALAVRPVTLIVDLQKSGNILATLEDTLPIRVVNV TPYLTLLFAA
Sequences:
>Translated_330_residues MAVRERSLPDGGRSRLERRRGFRRHNLDKISREAVAWFAIMHADQVAKSDQLAFRAWLRRDERHRVAYADIERLWSGASE LPVVKSRRREKRIAVTRRTFGAGMLAAMAGGGGWVAYQQHPFADYRTSAGERRTVRLADDSSVDMAGATALSVDFSSKLR LVTLHRGEAYFSVAPDTSRPFVVEAAAGRTMAAGTAFNVDYVSDDDVRVTVAQHAVDIRVAAEGARLDAGSQLTYGRESI GPPQAIDPASELGWRDGRLIFISQPFGRVVASLNRWRQGRLMVMESALAVRPVTLIVDLQKSGNILATLEDTLPIRVVNV TPYLTLLFAA >Mature_329_residues AVRERSLPDGGRSRLERRRGFRRHNLDKISREAVAWFAIMHADQVAKSDQLAFRAWLRRDERHRVAYADIERLWSGASEL PVVKSRRREKRIAVTRRTFGAGMLAAMAGGGGWVAYQQHPFADYRTSAGERRTVRLADDSSVDMAGATALSVDFSSKLRL VTLHRGEAYFSVAPDTSRPFVVEAAAGRTMAAGTAFNVDYVSDDDVRVTVAQHAVDIRVAAEGARLDAGSQLTYGRESIG PPQAIDPASELGWRDGRLIFISQPFGRVVASLNRWRQGRLMVMESALAVRPVTLIVDLQKSGNILATLEDTLPIRVVNVT PYLTLLFAA
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=300, Percent_Identity=28.6666666666667, Blast_Score=102, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 36519; Mature: 36388
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRERSLPDGGRSRLERRRGFRRHNLDKISREAVAWFAIMHADQVAKSDQLAFRAWLRR CCCCCCCCCCCHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC DERHRVAYADIERLWSGASELPVVKSRRREKRIAVTRRTFGAGMLAAMAGGGGWVAYQQH CCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEHHHCCCCEEEEECCCCEEEEEECC PFADYRTSAGERRTVRLADDSSVDMAGATALSVDFSSKLRLVTLHRGEAYFSVAPDTSRP CCCHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCC FVVEAAAGRTMAAGTAFNVDYVSDDDVRVTVAQHAVDIRVAAEGARLDAGSQLTYGRESI EEEEECCCCEEECCCEEEEEEECCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCC GPPQAIDPASELGWRDGRLIFISQPFGRVVASLNRWRQGRLMVMESALAVRPVTLIVDLQ CCCCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEHHHHCCEEEEEEEEC KSGNILATLEDTLPIRVVNVTPYLTLLFAA CCCCEEEEEECCCCEEEEEECCEEEEEECC >Mature Secondary Structure AVRERSLPDGGRSRLERRRGFRRHNLDKISREAVAWFAIMHADQVAKSDQLAFRAWLRR CCCCCCCCCCHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC DERHRVAYADIERLWSGASELPVVKSRRREKRIAVTRRTFGAGMLAAMAGGGGWVAYQQH CCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEHHHCCCCEEEEECCCCEEEEEECC PFADYRTSAGERRTVRLADDSSVDMAGATALSVDFSSKLRLVTLHRGEAYFSVAPDTSRP CCCHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCC FVVEAAAGRTMAAGTAFNVDYVSDDDVRVTVAQHAVDIRVAAEGARLDAGSQLTYGRESI EEEEECCCCEEECCCEEEEEEECCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCC GPPQAIDPASELGWRDGRLIFISQPFGRVVASLNRWRQGRLMVMESALAVRPVTLIVDLQ CCCCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEHHHHCCEEEEEEEEC KSGNILATLEDTLPIRVVNVTPYLTLLFAA CCCCEEEEEECCCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]