| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is fhuA [H]
Identifier: 75674922
GI number: 75674922
Start: 810794
End: 812695
Strand: Direct
Name: fhuA [H]
Synonym: Nwi_0725
Alternate gene names: 75674922
Gene position: 810794-812695 (Clockwise)
Preceding gene: 75674921
Following gene: 75674923
Centisome position: 23.83
GC content: 60.57
Gene sequence:
>1902_bases ATGGCGGGGCGGAGTGTTTCAGGAGTTGCGGCGATCAGGATGGCAAGGTTGCTGGCGTCGATATCGTTCGCCGCCTTGTT GTTGCCGTCTCAAGCCGCATTCGCGCAAACCGCGCCGTCATCAGCGCCATCGGCGGGCGCGCTTCAACAGTCGATCACCT TCGCCATTCCGCCGCAGTCCTTGTCGAGCGGCATCGTGGCGTTCTCGCGCGCGGCCGGAATCGATCTCGTTTTTGACGGC GCGGTGCCGCGCGGCGCGCGCACGTCAGGCGTCTCTGGAACGTTCACGGTGCGCGACGGCGTCAACCGGTTGCTTGCGGG CACCGGTCTGTCGGCGCGATTCACCAATGCGCGCACGGTGCAGATCGTCAACCCTTCCGCGGCGGGCGGCGTCAGCGGCG CGGCTCCGTCAGGCGCGATCTCGCTCGACACCATCGACGTGCAGGGCGAGACCGCGTGGGGGCCGGCGAACGGTTTCGTC GCCAGCCGCAGCGCCACCGCCACCAAGACCGATACGCCGATCATCGAGGTGCCGCAGTCGATTTCGGTGGTGACGCGAGA TCAGATCGAGATACGGAGAAACCAGACCCTGAACGAGACGCTGCAATACACGCCGGGTGTTTTTGCCGAGTCGAGCGGCA TGCAGCACAGTGGGCCGACGTTTCAGATACGAGGTTTCAGCGCCGTTCCCGCGGACGGGCCGATATTCCTGAACGGGTTG CGCACGATCAATAACGGCGATATCGAGCCTTTCGGATTGGAGCGTATCGAAGTAATGCGCGGCCCGGCATCGGTTCTCTA CGGGCAGAACCAGCCCAGCGGCGTGATCGCTCTCGTCACCAAGCGCCCGACGGAAGGACCCGTTCATGAAGTCCAGTTGC GGGGCGGCAGTTTCGGCCAGAAGAGTGGCGCTTTCGACTTCGGCGGTCCGGTGACTGAGGACAGAACGCTGCTCTATCGC TTCACCGGCCTGTTGCGGGAAGGCGGTAACGGCATTGATTTCTCAAACGATCAACGCGCGTTCGTTTCAGGCGCGGTGAC GTGGCGCCCCACGGACGCGACAGAACTCACGGCGTTCAGCCTCTTTCAGAAAGACAAAGGCAGATGGAATTACGGCCTCC CGGCGCAGGGAACGGCGCTGCCGAATCCGAACGGGCGAATCCCGGTTACGCGCTTCATCGGTGAGCCTGACCTTGACTAC AATGTAACGGAACGGGCCGTCGTCGGATACAACCTTCAACATCGCGCCACCGAGAGCCTCACCTTCAGGCAGAATCTTCA GTACGCGCGGGAAAACTGGGACTATCGCAACGCCACGCCGATCGGTCTTCAAGCCGACCTTCGTACGCTCGACCGTAGCT ACGAAACCCTGCGTGCGAGTTGGGACACTTTTGCGATTGACAACCAGGCTGAACTGAAGACTACGACCGGCGTCCTGCAC CACACCGTGCTGTTCGGTGTGGACTATCGATGGCGACGATACAATTCTCTTGGCTTATGGGGAGGAGTTGCTTCTCCGAT CGATGTTTTTGCGCCTGTCTATGGCCAACCCGTTCTCATTTCGGCTGACAATTATGGATCTCGTCAAACTCAAAATTTCC CCGGCATCTACCTTCAGGATCAGATCAAGCTCGACCGCTGGATCCTGACTTTCGGCGGACGCCACGATTGGGCGGAATCC AAGACCGTCAATGCCTTTAGTGCTGCAGTCACCAATCAGAACGATCGGGCCTTCACTAGGCGGGCCGGGCTTGGCTACGA ATTCGATAGCGGAGTGGTCCCTTACGTCAGCTATTCCGAGTCCTTCATGCCCGTTTCTGGAACGACGTTTGACCAGGTGC CGTTCAGGCCGAAACCGGAACGCAGTACGAGGCAGGCGTCAAATACCAGCCGCATGATATGA
Upstream 100 bases:
>100_bases TTTTCTCCGGTCCATCTGATACCGGCGGGATCGCTTCGTCTGAACGAGTGAGGAGCGCGGAATTAAGGCCGACGCTCATT TGTTCAGGGGAGCGGGGGCG
Downstream 100 bases:
>100_bases ACCTGCGGATTACGGCCGCCATTTATGATCTGAGGCGCAAGAACGTTACGACACGGGATCCGGCGCACCCGTTCTTCAGC ATCCAGACCGGCGAGGTCAC
Product: TonB-dependent receptor protein
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MAGRSVSGVAAIRMARLLASISFAALLLPSQAAFAQTAPSSAPSAGALQQSITFAIPPQSLSSGIVAFSRAAGIDLVFDG AVPRGARTSGVSGTFTVRDGVNRLLAGTGLSARFTNARTVQIVNPSAAGGVSGAAPSGAISLDTIDVQGETAWGPANGFV ASRSATATKTDTPIIEVPQSISVVTRDQIEIRRNQTLNETLQYTPGVFAESSGMQHSGPTFQIRGFSAVPADGPIFLNGL RTINNGDIEPFGLERIEVMRGPASVLYGQNQPSGVIALVTKRPTEGPVHEVQLRGGSFGQKSGAFDFGGPVTEDRTLLYR FTGLLREGGNGIDFSNDQRAFVSGAVTWRPTDATELTAFSLFQKDKGRWNYGLPAQGTALPNPNGRIPVTRFIGEPDLDY NVTERAVVGYNLQHRATESLTFRQNLQYARENWDYRNATPIGLQADLRTLDRSYETLRASWDTFAIDNQAELKTTTGVLH HTVLFGVDYRWRRYNSLGLWGGVASPIDVFAPVYGQPVLISADNYGSRQTQNFPGIYLQDQIKLDRWILTFGGRHDWAES KTVNAFSAAVTNQNDRAFTRRAGLGYEFDSGVVPYVSYSESFMPVSGTTFDQVPFRPKPERSTRQASNTSRMI
Sequences:
>Translated_633_residues MAGRSVSGVAAIRMARLLASISFAALLLPSQAAFAQTAPSSAPSAGALQQSITFAIPPQSLSSGIVAFSRAAGIDLVFDG AVPRGARTSGVSGTFTVRDGVNRLLAGTGLSARFTNARTVQIVNPSAAGGVSGAAPSGAISLDTIDVQGETAWGPANGFV ASRSATATKTDTPIIEVPQSISVVTRDQIEIRRNQTLNETLQYTPGVFAESSGMQHSGPTFQIRGFSAVPADGPIFLNGL RTINNGDIEPFGLERIEVMRGPASVLYGQNQPSGVIALVTKRPTEGPVHEVQLRGGSFGQKSGAFDFGGPVTEDRTLLYR FTGLLREGGNGIDFSNDQRAFVSGAVTWRPTDATELTAFSLFQKDKGRWNYGLPAQGTALPNPNGRIPVTRFIGEPDLDY NVTERAVVGYNLQHRATESLTFRQNLQYARENWDYRNATPIGLQADLRTLDRSYETLRASWDTFAIDNQAELKTTTGVLH HTVLFGVDYRWRRYNSLGLWGGVASPIDVFAPVYGQPVLISADNYGSRQTQNFPGIYLQDQIKLDRWILTFGGRHDWAES KTVNAFSAAVTNQNDRAFTRRAGLGYEFDSGVVPYVSYSESFMPVSGTTFDQVPFRPKPERSTRQASNTSRMI >Mature_632_residues AGRSVSGVAAIRMARLLASISFAALLLPSQAAFAQTAPSSAPSAGALQQSITFAIPPQSLSSGIVAFSRAAGIDLVFDGA VPRGARTSGVSGTFTVRDGVNRLLAGTGLSARFTNARTVQIVNPSAAGGVSGAAPSGAISLDTIDVQGETAWGPANGFVA SRSATATKTDTPIIEVPQSISVVTRDQIEIRRNQTLNETLQYTPGVFAESSGMQHSGPTFQIRGFSAVPADGPIFLNGLR TINNGDIEPFGLERIEVMRGPASVLYGQNQPSGVIALVTKRPTEGPVHEVQLRGGSFGQKSGAFDFGGPVTEDRTLLYRF TGLLREGGNGIDFSNDQRAFVSGAVTWRPTDATELTAFSLFQKDKGRWNYGLPAQGTALPNPNGRIPVTRFIGEPDLDYN VTERAVVGYNLQHRATESLTFRQNLQYARENWDYRNATPIGLQADLRTLDRSYETLRASWDTFAIDNQAELKTTTGVLHH TVLFGVDYRWRRYNSLGLWGGVASPIDVFAPVYGQPVLISADNYGSRQTQNFPGIYLQDQIKLDRWILTFGGRHDWAESK TVNAFSAAVTNQNDRAFTRRAGLGYEFDSGVVPYVSYSESFMPVSGTTFDQVPFRPKPERSTRQASNTSRMI
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=537, Percent_Identity=35.9404096834264, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1787344, Length=270, Percent_Identity=27.037037037037, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787024, Length=364, Percent_Identity=21.4285714285714, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788478, Length=209, Percent_Identity=27.2727272727273, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 68374; Mature: 68243
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRSVSGVAAIRMARLLASISFAALLLPSQAAFAQTAPSSAPSAGALQQSITFAIPPQS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHCCEEEECCHH LSSGIVAFSRAAGIDLVFDGAVPRGARTSGVSGTFTVRDGVNRLLAGTGLSARFTNARTV HHCCCEEEHHCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCEEECCCEEE QIVNPSAAGGVSGAAPSGAISLDTIDVQGETAWGPANGFVASRSATATKTDTPIIEVPQS EEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEECCCC ISVVTRDQIEIRRNQTLNETLQYTPGVFAESSGMQHSGPTFQIRGFSAVPADGPIFLNGL CEEEECCHHHHHCCCCHHHHHHCCCCCEECCCCCCCCCCEEEEECEEECCCCCCEEEECE RTINNGDIEPFGLERIEVMRGPASVLYGQNQPSGVIALVTKRPTEGPVHEVQLRGGSFGQ EECCCCCCCCCCCCHHEECCCCHHEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCC KSGAFDFGGPVTEDRTLLYRFTGLLREGGNGIDFSNDQRAFVSGAVTWRPTDATELTAFS CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHH LFQKDKGRWNYGLPAQGTALPNPNGRIPVTRFIGEPDLDYNVTERAVVGYNLQHRATESL HHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHH TFRQNLQYARENWDYRNATPIGLQADLRTLDRSYETLRASWDTFAIDNQAELKTTTGVLH HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH HTVLFGVDYRWRRYNSLGLWGGVASPIDVFAPVYGQPVLISADNYGSRQTQNFPGIYLQD EEEEEECCCCEEEECCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEE QIKLDRWILTFGGRHDWAESKTVNAFSAAVTNQNDRAFTRRAGLGYEFDSGVVPYVSYSE CEEEEEEEEEECCCCCCCCCCCCCHHHHEECCCCCHHHHHHCCCCEECCCCCCCEEECCC SFMPVSGTTFDQVPFRPKPERSTRQASNTSRMI CEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure AGRSVSGVAAIRMARLLASISFAALLLPSQAAFAQTAPSSAPSAGALQQSITFAIPPQS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHCCEEEECCHH LSSGIVAFSRAAGIDLVFDGAVPRGARTSGVSGTFTVRDGVNRLLAGTGLSARFTNARTV HHCCCEEEHHCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCEEECCCEEE QIVNPSAAGGVSGAAPSGAISLDTIDVQGETAWGPANGFVASRSATATKTDTPIIEVPQS EEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEECCCC ISVVTRDQIEIRRNQTLNETLQYTPGVFAESSGMQHSGPTFQIRGFSAVPADGPIFLNGL CEEEECCHHHHHCCCCHHHHHHCCCCCEECCCCCCCCCCEEEEECEEECCCCCCEEEECE RTINNGDIEPFGLERIEVMRGPASVLYGQNQPSGVIALVTKRPTEGPVHEVQLRGGSFGQ EECCCCCCCCCCCCHHEECCCCHHEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCC KSGAFDFGGPVTEDRTLLYRFTGLLREGGNGIDFSNDQRAFVSGAVTWRPTDATELTAFS CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHH LFQKDKGRWNYGLPAQGTALPNPNGRIPVTRFIGEPDLDYNVTERAVVGYNLQHRATESL HHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHH TFRQNLQYARENWDYRNATPIGLQADLRTLDRSYETLRASWDTFAIDNQAELKTTTGVLH HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH HTVLFGVDYRWRRYNSLGLWGGVASPIDVFAPVYGQPVLISADNYGSRQTQNFPGIYLQD EEEEEECCCCEEEECCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEE QIKLDRWILTFGGRHDWAESKTVNAFSAAVTNQNDRAFTRRAGLGYEFDSGVVPYVSYSE CEEEEEEEEEECCCCCCCCCCCCCHHHHEECCCCCHHHHHHCCCCEECCCCCCCEEECCC SFMPVSGTTFDQVPFRPKPERSTRQASNTSRMI CEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]