| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is yitW [H]
Identifier: 75674908
GI number: 75674908
Start: 793053
End: 793460
Strand: Direct
Name: yitW [H]
Synonym: Nwi_0711
Alternate gene names: 75674908
Gene position: 793053-793460 (Clockwise)
Preceding gene: 75674903
Following gene: 75674913
Centisome position: 23.31
GC content: 58.58
Gene sequence:
>408_bases ATGACGGATGAGGCGAACGTAGCTGGAGCCGAAAGCGCCTGCCTGGTCGAGGCTCGCACGGATAGCGGGACTGATCACGC CGCGAATACCCCGCCTGACGAGATGGCGCGAATGGGTGAGGAAATCATCGCCGCGCTCAAAACGGTCTATGATCCTGAAA TTCCGGCAGACCTCTACGAGCTTGGTCTGATCTACAAGATCGCAATAGACGACGAACGCAAGGTCAATATCGAGATGACA TTGACCTCGCCGAATTGCCCGTCAGCGGCAGAATTGCCCGGTCAGATCGAACGAGCGGTTAAAGGGGTCTCCGGTGTGCA CGATGCCAAGGTCGCCATCGTCTGGGAACCGACGTGGGATCCGAGCCGCATGTCAGACGAGGCGCGCACGGTCCTGAACA TGTGGTGA
Upstream 100 bases:
>100_bases GTACGGAAGGGGCCTCCGAATCCGAGCCTACCGAGCGGTTCTAGTCGACCCGGGGTTGAGGCTTGGCGTGAGGATTTCGC CAAAGCGCAGGAGTTTTGAC
Downstream 100 bases:
>100_bases TGGACCGCGGGAACCGGCGTTGACTTGATGCTCGCGCGACCTGCCGGCAAAGGCCGAGCTATGTTCACTGAGTGATATTT ACCCGCAGGCCCGCTATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTDEANVAGAESACLVEARTDSGTDHAANTPPDEMARMGEEIIAALKTVYDPEIPADLYELGLIYKIAIDDERKVNIEMT LTSPNCPSAAELPGQIERAVKGVSGVHDAKVAIVWEPTWDPSRMSDEARTVLNMW
Sequences:
>Translated_135_residues MTDEANVAGAESACLVEARTDSGTDHAANTPPDEMARMGEEIIAALKTVYDPEIPADLYELGLIYKIAIDDERKVNIEMT LTSPNCPSAAELPGQIERAVKGVSGVHDAKVAIVWEPTWDPSRMSDEARTVLNMW >Mature_134_residues TDEANVAGAESACLVEARTDSGTDHAANTPPDEMARMGEEIIAALKTVYDPEIPADLYELGLIYKIAIDDERKVNIEMTL TSPNCPSAAELPGQIERAVKGVSGVHDAKVAIVWEPTWDPSRMSDEARTVLNMW
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 14672; Mature: 14540
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEANVAGAESACLVEARTDSGTDHAANTPPDEMARMGEEIIAALKTVYDPEIPADLYE CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LGLIYKIAIDDERKVNIEMTLTSPNCPSAAELPGQIERAVKGVSGVHDAKVAIVWEPTWD HCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCC PSRMSDEARTVLNMW CHHCCHHHHHHHCCC >Mature Secondary Structure TDEANVAGAESACLVEARTDSGTDHAANTPPDEMARMGEEIIAALKTVYDPEIPADLYE CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LGLIYKIAIDDERKVNIEMTLTSPNCPSAAELPGQIERAVKGVSGVHDAKVAIVWEPTWD HCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCC PSRMSDEARTVLNMW CHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]