| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674903
Identifier: 75674903
GI number: 75674903
Start: 788265
End: 788825
Strand: Direct
Name: 75674903
Synonym: Nwi_0706
Alternate gene names: NA
Gene position: 788265-788825 (Clockwise)
Preceding gene: 75674902
Following gene: 75674908
Centisome position: 23.17
GC content: 65.24
Gene sequence:
>561_bases ATGTCAGCCCGCTTTATGAGAACGTGCCTGCTCACCCTTGCCGCCGCAATCACGACCGTTGCCATGACTGCGGCTCATGC GCAGCAACCGGCCACGCCGGCGGCGTCTACGCTGCCGAACGGGGCCGCCTCGGTGAGCGAGACCTACGGCGACTGGACGG TGGACTGCCGGCTCGTCGATCGGCGGAAGCAATGTCTGCTGTCGCAGGTGCAGGGCAACAAGGAAACCGGCAGGCGCGTT TACGCTATCGAACTGACGCCTCCCGCAGGCGGCAAGATCGAGGGTACGATCCTGATGCCGTTCGGGCTCAATCTCGATGC CGGCGCGGTGCTCAAGCTCGACGACAAGGACCTTGGCAAGGGGCTGCGCTTCTCCACTTGCGTGCCGCAGGGCTGCCTGT TGCCGGTGAGCTTTCCGGCCACGGCCACGGACGCCATGCGGAAGGGCACGAAACTCGTGGTCGCTTCCCTCAACCTCTCC AGCAACGAGCCCGTCACCTTCAGCGTCTCGCTGAACGGCTTCGCCGCCGCGCTGGCGCGGGTGACAGAACTCGCGAAATA A
Upstream 100 bases:
>100_bases CGGTGTCGCTGCCGCGCCGCGCCAGCCCCGTCCCAGCCCCTCCCTCCAACGTCGGCGGCGGCTCCATCACACTCGCCGTC CCAATCAGGTTCAACAGATA
Downstream 100 bases:
>100_bases AACGACTCCTCCCTCATAATTTGGCCCGTCCATCTACGACGGGTAGCCGAATTGCGGCGCGACCGGCCCCCGAGACTATC AAGGAACGATCGTTCACAAC
Product: invasion associated locus B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSARFMRTCLLTLAAAITTVAMTAAHAQQPATPAASTLPNGAASVSETYGDWTVDCRLVDRRKQCLLSQVQGNKETGRRV YAIELTPPAGGKIEGTILMPFGLNLDAGAVLKLDDKDLGKGLRFSTCVPQGCLLPVSFPATATDAMRKGTKLVVASLNLS SNEPVTFSVSLNGFAAALARVTELAK
Sequences:
>Translated_186_residues MSARFMRTCLLTLAAAITTVAMTAAHAQQPATPAASTLPNGAASVSETYGDWTVDCRLVDRRKQCLLSQVQGNKETGRRV YAIELTPPAGGKIEGTILMPFGLNLDAGAVLKLDDKDLGKGLRFSTCVPQGCLLPVSFPATATDAMRKGTKLVVASLNLS SNEPVTFSVSLNGFAAALARVTELAK >Mature_185_residues SARFMRTCLLTLAAAITTVAMTAAHAQQPATPAASTLPNGAASVSETYGDWTVDCRLVDRRKQCLLSQVQGNKETGRRVY AIELTPPAGGKIEGTILMPFGLNLDAGAVLKLDDKDLGKGLRFSTCVPQGCLLPVSFPATATDAMRKGTKLVVASLNLSS NEPVTFSVSLNGFAAALARVTELAK
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ialB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010642 [H]
Pfam domain/function: PF06776 IalB [H]
EC number: NA
Molecular weight: Translated: 19513; Mature: 19382
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARFMRTCLLTLAAAITTVAMTAAHAQQPATPAASTLPNGAASVSETYGDWTVDCRLVD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHCCCCEEEEEEEHH RRKQCLLSQVQGNKETGRRVYAIELTPPAGGKIEGTILMPFGLNLDAGAVLKLDDKDLGK HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEECCHHHCC GLRFSTCVPQGCLLPVSFPATATDAMRKGTKLVVASLNLSSNEPVTFSVSLNGFAAALAR CCEEECCCCCCCEEEEECCCCHHHHHHCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHH VTELAK HHHHCC >Mature Secondary Structure SARFMRTCLLTLAAAITTVAMTAAHAQQPATPAASTLPNGAASVSETYGDWTVDCRLVD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHCCCCEEEEEEEHH RRKQCLLSQVQGNKETGRRVYAIELTPPAGGKIEGTILMPFGLNLDAGAVLKLDDKDLGK HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEECCHHHCC GLRFSTCVPQGCLLPVSFPATATDAMRKGTKLVVASLNLSSNEPVTFSVSLNGFAAALAR CCEEECCCCCCCEEEEECCCCHHHHHHCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHH VTELAK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]