Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75674902

Identifier: 75674902

GI number: 75674902

Start: 787462

End: 788265

Strand: Direct

Name: 75674902

Synonym: Nwi_0705

Alternate gene names: NA

Gene position: 787462-788265 (Clockwise)

Preceding gene: 75674901

Following gene: 75674903

Centisome position: 23.15

GC content: 72.64

Gene sequence:

>804_bases
ATGATGAAAATCGACTGGCGCGACCCGGACGGCCGGGCCGGCGATGATGTGAACCGGGCGGCGGCGCTGCGCTGGACCGC
GGCCGGGCTTGCGGTGGTGGCGCTGCATGCCGGCGGCATCTGGATGGCGCTGCACTGGCCGGCGGCGGCGGAGGCGCCGG
GCGATCCGCCGGCGGCGATCATGATGGAGCTGGCGCCGATGGCTGTCGCGCCCGAGGCGCCGCAGCAGGACGTCGCGCCG
GGGCCGGAGATGGTGGAGGCCGAGGAGCAGGTCGATCCGGACAAGCCGATCGAGGAGAAGCCTGATCCCGAGCCGACGCC
TCCGGAGGTGAAGGAGGCCGAGGTCAAGCTGCCGGAAACGCCGAAGGTGGAGAAGGCGGAGGTTGTGCTGCCGGCCAAGG
TCGAGCCGCCGAAGCCGAAGCCGAAGAAGAAAAAGCAGAAGAAGGCGCCGCGCACCACCGCGCCGCAGAGTTCGCAGGCG
CAGCGCGCCGATCGCGCGGCCGCGCCGGCCGAAGGCATGGCGTCGTCGATGTCGCCGGCGACCTGGCGCGCCGCGCTGAT
GGCGCATCTCAACCGCCACAAGCGCTTCCCGCCGGGCGCGGGCATGGGCGTGGCCTCGGTCGCGTTCACGATCGACCGCT
CGGGCCGGGTGCTGTCGGCGCGCCTGGTGCGCTCGGCCGGCGATTCCTCGCTCGACGCCGAGGCGGTGTCGCTGCCGCGC
CGCGCCAGCCCCGTCCCAGCCCCTCCCTCCAACGTCGGCGGCGGCTCCATCACACTCGCCGTCCCAATCAGGTTCAACAG
ATAA

Upstream 100 bases:

>100_bases
TGCGCGAGGCCGGCTATCTCAAGATCGCGCTGGTGGGGCTTGAGGATACCGGGCAGGCGGTGGCGGCGGGCGGAGCCGCG
CCGGCGGCGGCGCCTGCGCC

Downstream 100 bases:

>100_bases
TGTCAGCCCGCTTTATGAGAACGTGCCTGCTCACCCTTGCCGCCGCAATCACGACCGTTGCCATGACTGCGGCTCATGCG
CAGCAACCGGCCACGCCGGC

Product: TonB protein

Products: NA

Alternate protein names: NB-Like; NB Family C-Terminal Domain Protein; NB Like Protein; NB-Like Protein

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAIMMELAPMAVAPEAPQQDVAP
GPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPETPKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQA
QRADRAAAPAEGMASSMSPATWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR
RASPVPAPPSNVGGGSITLAVPIRFNR

Sequences:

>Translated_267_residues
MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAIMMELAPMAVAPEAPQQDVAP
GPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPETPKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQA
QRADRAAAPAEGMASSMSPATWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR
RASPVPAPPSNVGGGSITLAVPIRFNR
>Mature_267_residues
MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAIMMELAPMAVAPEAPQQDVAP
GPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPETPKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQA
QRADRAAAPAEGMASSMSPATWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR
RASPVPAPPSNVGGGSITLAVPIRFNR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28185; Mature: 28185

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAI
CCEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCEEEEEECCCCCCCCCCCHHHH
MMELAPMAVAPEAPQQDVAPGPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPET
HHHHHCHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
PKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQAQRADRAAAPAEGMASSMSPA
CCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCH
TWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHCCC
RASPVPAPPSNVGGGSITLAVPIRFNR
CCCCCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAI
CCEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCEEEEEECCCCCCCCCCCHHHH
MMELAPMAVAPEAPQQDVAPGPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPET
HHHHHCHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
PKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQAQRADRAAAPAEGMASSMSPA
CCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCH
TWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHCCC
RASPVPAPPSNVGGGSITLAVPIRFNR
CCCCCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA