| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674902
Identifier: 75674902
GI number: 75674902
Start: 787462
End: 788265
Strand: Direct
Name: 75674902
Synonym: Nwi_0705
Alternate gene names: NA
Gene position: 787462-788265 (Clockwise)
Preceding gene: 75674901
Following gene: 75674903
Centisome position: 23.15
GC content: 72.64
Gene sequence:
>804_bases ATGATGAAAATCGACTGGCGCGACCCGGACGGCCGGGCCGGCGATGATGTGAACCGGGCGGCGGCGCTGCGCTGGACCGC GGCCGGGCTTGCGGTGGTGGCGCTGCATGCCGGCGGCATCTGGATGGCGCTGCACTGGCCGGCGGCGGCGGAGGCGCCGG GCGATCCGCCGGCGGCGATCATGATGGAGCTGGCGCCGATGGCTGTCGCGCCCGAGGCGCCGCAGCAGGACGTCGCGCCG GGGCCGGAGATGGTGGAGGCCGAGGAGCAGGTCGATCCGGACAAGCCGATCGAGGAGAAGCCTGATCCCGAGCCGACGCC TCCGGAGGTGAAGGAGGCCGAGGTCAAGCTGCCGGAAACGCCGAAGGTGGAGAAGGCGGAGGTTGTGCTGCCGGCCAAGG TCGAGCCGCCGAAGCCGAAGCCGAAGAAGAAAAAGCAGAAGAAGGCGCCGCGCACCACCGCGCCGCAGAGTTCGCAGGCG CAGCGCGCCGATCGCGCGGCCGCGCCGGCCGAAGGCATGGCGTCGTCGATGTCGCCGGCGACCTGGCGCGCCGCGCTGAT GGCGCATCTCAACCGCCACAAGCGCTTCCCGCCGGGCGCGGGCATGGGCGTGGCCTCGGTCGCGTTCACGATCGACCGCT CGGGCCGGGTGCTGTCGGCGCGCCTGGTGCGCTCGGCCGGCGATTCCTCGCTCGACGCCGAGGCGGTGTCGCTGCCGCGC CGCGCCAGCCCCGTCCCAGCCCCTCCCTCCAACGTCGGCGGCGGCTCCATCACACTCGCCGTCCCAATCAGGTTCAACAG ATAA
Upstream 100 bases:
>100_bases TGCGCGAGGCCGGCTATCTCAAGATCGCGCTGGTGGGGCTTGAGGATACCGGGCAGGCGGTGGCGGCGGGCGGAGCCGCG CCGGCGGCGGCGCCTGCGCC
Downstream 100 bases:
>100_bases TGTCAGCCCGCTTTATGAGAACGTGCCTGCTCACCCTTGCCGCCGCAATCACGACCGTTGCCATGACTGCGGCTCATGCG CAGCAACCGGCCACGCCGGC
Product: TonB protein
Products: NA
Alternate protein names: NB-Like; NB Family C-Terminal Domain Protein; NB Like Protein; NB-Like Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAIMMELAPMAVAPEAPQQDVAP GPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPETPKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQA QRADRAAAPAEGMASSMSPATWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR RASPVPAPPSNVGGGSITLAVPIRFNR
Sequences:
>Translated_267_residues MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAIMMELAPMAVAPEAPQQDVAP GPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPETPKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQA QRADRAAAPAEGMASSMSPATWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR RASPVPAPPSNVGGGSITLAVPIRFNR >Mature_267_residues MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAIMMELAPMAVAPEAPQQDVAP GPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPETPKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQA QRADRAAAPAEGMASSMSPATWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR RASPVPAPPSNVGGGSITLAVPIRFNR
Specific function: Unknown
COG id: COG0810
COG function: function code M; Periplasmic protein TonB, links inner and outer membranes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28185; Mature: 28185
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAI CCEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCEEEEEECCCCCCCCCCCHHHH MMELAPMAVAPEAPQQDVAPGPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPET HHHHHCHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCC PKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQAQRADRAAAPAEGMASSMSPA CCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCH TWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHCCC RASPVPAPPSNVGGGSITLAVPIRFNR CCCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MMKIDWRDPDGRAGDDVNRAAALRWTAAGLAVVALHAGGIWMALHWPAAAEAPGDPPAAI CCEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCEEEEEECCCCCCCCCCCHHHH MMELAPMAVAPEAPQQDVAPGPEMVEAEEQVDPDKPIEEKPDPEPTPPEVKEAEVKLPET HHHHHCHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCC PKVEKAEVVLPAKVEPPKPKPKKKKQKKAPRTTAPQSSQAQRADRAAAPAEGMASSMSPA CCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCH TWRAALMAHLNRHKRFPPGAGMGVASVAFTIDRSGRVLSARLVRSAGDSSLDAEAVSLPR HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHCCC RASPVPAPPSNVGGGSITLAVPIRFNR CCCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA