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The map label for this gene is psd [H]

Identifier: 75674896

GI number: 75674896

Start: 779231

End: 780124

Strand: Direct

Name: psd [H]

Synonym: Nwi_0699

Alternate gene names: 75674896

Gene position: 779231-780124 (Clockwise)

Preceding gene: 75674894

Following gene: 75674897

Centisome position: 22.9

GC content: 60.74

Gene sequence:

>894_bases
ATGAGAAAGCTGATCTCGGCCCTGACCGAGCAGGAGGATATGAATTTCCTGCTGACCAACCGGATTCCGCGGGCCATGCT
GACCCGGTTTATGGGATGGTTCGGCAAGATCGAGCAGCCCCTGATCCGGGATCTCTCGATCGCGTGCTGGCGTCTGTTCT
CCGATCTCGACCTGAGCGAAGCACGCAAATCCAGCTTCAAGAGCCTGCATGATTGTTTTACGCGGGAGTTGCTTCCGGGT
TCGCGCCTGCCGGATCCTGATCCCGCGATTGTGGTCAGCCCCTGCGACGCCATCGTCGGGGCGTTCGGGAAGGTGGCGGA
TACGGAGCTTTTTCAGATCAAGGGCGCGCCTTATTCGCTACCGGACCTGCTCGGCGATCCGGCGCTGGTCGAGGCCCACC
GGAATGGCCGCTTCATCACCCTGCGGCTGACGTCGAGCATGTACCATCGCTTTCATGCGCCGCACGATTGCCGGATCGAT
CGGGTCACGTTCATTCACGGCGACGTATGGAACGTGAACCCGATCGCATTGAAGCGGGTCGAGCGGCTGTTCTGCAAGAA
CGAGCGGGCGGTGCTTCAGGCGCGGCTGATAACCGGCGAGACGCTGACCCTGGTGCCGGTGGCGGCGATTCTGGTCGCGA
GCATTCGGCTGCACTTCATCGATGCCACCCTCAACGCTCGAACCAGGGGACCGACGGTTTTTTCCTGCGATGCGAGCGCT
CGAAAAGGCGACGAACTCGGCTGGTTCGAGCACGGATCGACGATCATTGTGCTGGCGTCGGATGAATTCGATTTCTGCGA
CAATGTGGTGGAATCGGCGCGACTTAAGGCGGGTCAGCCTCTCATGCGAAGGGTTGCCGGGGACAGGATGGCGGGAACGC
AGAATCGAATCTGA

Upstream 100 bases:

>100_bases
CGCTGCTGCGCCGCCAATCGCGGCGGCGGACAGGGCCAGAATCGGAAAAGGCAGGTCCATGCCGCCAGCGCTATCCAACC
CCTCTGACAGGTTCATGACA

Downstream 100 bases:

>100_bases
TTGATGGTGGGCGATTCGTGACCGGCCCCAATACGGGGCCGCGAGAGGATAGCGAAGCGTCGCTTTATCGGTGTTGCGAA
CCTCCCCTGAGTGACACATG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MRKLISALTEQEDMNFLLTNRIPRAMLTRFMGWFGKIEQPLIRDLSIACWRLFSDLDLSEARKSSFKSLHDCFTRELLPG
SRLPDPDPAIVVSPCDAIVGAFGKVADTELFQIKGAPYSLPDLLGDPALVEAHRNGRFITLRLTSSMYHRFHAPHDCRID
RVTFIHGDVWNVNPIALKRVERLFCKNERAVLQARLITGETLTLVPVAAILVASIRLHFIDATLNARTRGPTVFSCDASA
RKGDELGWFEHGSTIIVLASDEFDFCDNVVESARLKAGQPLMRRVAGDRMAGTQNRI

Sequences:

>Translated_297_residues
MRKLISALTEQEDMNFLLTNRIPRAMLTRFMGWFGKIEQPLIRDLSIACWRLFSDLDLSEARKSSFKSLHDCFTRELLPG
SRLPDPDPAIVVSPCDAIVGAFGKVADTELFQIKGAPYSLPDLLGDPALVEAHRNGRFITLRLTSSMYHRFHAPHDCRID
RVTFIHGDVWNVNPIALKRVERLFCKNERAVLQARLITGETLTLVPVAAILVASIRLHFIDATLNARTRGPTVFSCDASA
RKGDELGWFEHGSTIIVLASDEFDFCDNVVESARLKAGQPLMRRVAGDRMAGTQNRI
>Mature_297_residues
MRKLISALTEQEDMNFLLTNRIPRAMLTRFMGWFGKIEQPLIRDLSIACWRLFSDLDLSEARKSSFKSLHDCFTRELLPG
SRLPDPDPAIVVSPCDAIVGAFGKVADTELFQIKGAPYSLPDLLGDPALVEAHRNGRFITLRLTSSMYHRFHAPHDCRID
RVTFIHGDVWNVNPIALKRVERLFCKNERAVLQARLITGETLTLVPVAAILVASIRLHFIDATLNARTRGPTVFSCDASA
RKGDELGWFEHGSTIIVLASDEFDFCDNVVESARLKAGQPLMRRVAGDRMAGTQNRI

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790604, Length=277, Percent_Identity=29.2418772563177, Blast_Score=116, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71980843, Length=276, Percent_Identity=27.8985507246377, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71980840, Length=296, Percent_Identity=26.3513513513513, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6321609, Length=227, Percent_Identity=28.1938325991189, Blast_Score=97, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24649526, Length=301, Percent_Identity=26.578073089701, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24649528, Length=301, Percent_Identity=26.578073089701, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24649524, Length=301, Percent_Identity=26.578073089701, Blast_Score=91, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR005221 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 33317; Mature: 33317

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLISALTEQEDMNFLLTNRIPRAMLTRFMGWFGKIEQPLIRDLSIACWRLFSDLDLSE
CHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH
ARKSSFKSLHDCFTRELLPGSRLPDPDPAIVVSPCDAIVGAFGKVADTELFQIKGAPYSL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEECCCCCCC
PDLLGDPALVEAHRNGRFITLRLTSSMYHRFHAPHDCRIDRVTFIHGDVWNVNPIALKRV
HHHCCCCCEEEECCCCCEEEEEECHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHH
ERLFCKNERAVLQARLITGETLTLVPVAAILVASIRLHFIDATLNARTRGPTVFSCDASA
HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCC
RKGDELGWFEHGSTIIVLASDEFDFCDNVVESARLKAGQPLMRRVAGDRMAGTQNRI
CCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRKLISALTEQEDMNFLLTNRIPRAMLTRFMGWFGKIEQPLIRDLSIACWRLFSDLDLSE
CHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH
ARKSSFKSLHDCFTRELLPGSRLPDPDPAIVVSPCDAIVGAFGKVADTELFQIKGAPYSL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEECCCCCCC
PDLLGDPALVEAHRNGRFITLRLTSSMYHRFHAPHDCRIDRVTFIHGDVWNVNPIALKRV
HHHCCCCCEEEECCCCCEEEEEECHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHH
ERLFCKNERAVLQARLITGETLTLVPVAAILVASIRLHFIDATLNARTRGPTVFSCDASA
HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCC
RKGDELGWFEHGSTIIVLASDEFDFCDNVVESARLKAGQPLMRRVAGDRMAGTQNRI
CCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA