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The map label for this gene is bfrD [H]

Identifier: 75674897

GI number: 75674897

Start: 780447

End: 782804

Strand: Direct

Name: bfrD [H]

Synonym: Nwi_0700

Alternate gene names: 75674897

Gene position: 780447-782804 (Clockwise)

Preceding gene: 75674896

Following gene: 75674898

Centisome position: 22.94

GC content: 60.69

Gene sequence:

>2358_bases
ATGACCAAGAAGCTTGAGGTGCAGCTTTATTCGTCGATTTCTCATCTGGCTTTGTCAGCCGGACTTGCGGTGTCGCTGGC
CGCGATCGCTCAGCCGGCGTCGGCGCAATCATCTCAAACATCGAGCGCTATTGCCCTTGATACCATCAACGTCCAAGGGG
AGGGCGGGGCCCCGAGCAGCGGTGAAGGCGCATACAATGTTACGATGGCCTCTTCACCGCGGCAGACCGCGCCGTTGCTC
GATACGCCGCAAACCGTGACGGTCGTGCCGCAGGCGGTTATTCGCCAGACCGGCGCACGCAACCTCACCGAAGTGTTGCG
CACCACGCCTGGCATTTCCTTCGAAGGCGGCGAGAACGGTTTCGGCACCTCGAGCAACACCTTCCAAATGCGCGGCTTCG
ACGCCAGCGGCAGCCTTTTCATCGACAACGTGCGCTCGAACGGCAGCTACACGCGCGACATATTCAATGTGGACCGCGTC
GAGGTGTTCAAGGGGGCCGCGGCGGATAATGGCCGCGGGAATGCCGGCGGCTATATCAACATGGTCACCAAGCTGCCGTC
GCTGCAGAACTTCACTCAGTTCGATACCTTCTCCGGCTTCTCTGAATACGGAAACCAGCCGCAGAAGCGCGGCACCGTCG
ATCTCAACTACATCGTCGCGCCCAACACGGCCGTGCGTTTCAACGCCTTGCTGGAACAGAGTGGCATTCCCGGCCGCGAT
CTGGCCGAAAACAAGGCGTGGGGCGTTGCGCCGTCGGTCGCCCTGGGTCTCGGCACCGATTTCCGTACGTTCCTGGCTTT
CGAGCATCTGTCGAGGCGGGATCGTCCGGATTGGGGTGTGCCGGGGGCGACCGTTCCAGGTCTCGTAACCTATAATCCAG
CAACGATGGGTGTTCGCCGCAACGCGTTCTACGGCCTGCGCTCGGACTTCGACAATGTGGACGCCGACCGCGTGCTCGGT
CGTTTCGAATACGACATCACCCGGCGCATCACGATCAGCAACCAGACGGTCTGGGCGCAGGTCGACCGCACGACGCGCTT
TACCCAGCCGACCGGATTCACTGCGCCGGCCACCGCCGCGACCAGCACGACTTTCTACGGCAGGCGCAACCAGACGGTCA
GCAACATCACCAACATGACCATCGATGTGGACACCGGTCCTTTCAATCATAAGATCGCGACGGGCCTCGAGTTCAACCAT
GAAACGTCCGACGCCAATCGGTTCGGTTCGATCAGCTCGACGACCAATCCGGCGCTGCTTGCCAACCTGTTCGATCCGAA
TCCGGATCGTGCCGGACCTGCGCCTTTCAACCCGACGGAAAACAACCGCGCCAGCGTATCCACCGCCGCAGCTTACTTCT
ACGACACCATCAAGCTCTCCGAGCAGTGGCAGATCACCGGCGGCTTGCGCGCTGAACACTACAAGGTCGATATCAACAGC
CGCACCGTCGCCGGCGCGCCGACCGGCCTCGGAAATTTCAACGACACCCGAACCACGCTGAACGGTAAGGTCGGCCTGGT
CTACAAGCCGGTGAGGAACGCCAGCATCTATGGTTCATTCGGCGTTTCGCATCTGCCGCCGGGTTCCTATCTTTCCAACG
AGGATATTTCCCGTACGGGCGACAATGCCTTCCCCGGCCTCGTTCAGGGTGCCGATCCAGTGCGCTTCCACAACTATGAA
CTGGGCAGTAAAGTTGACTTCTTCAACAAGCGGTTGATGGTCGCCGCCGCTTTGTTCCGCACGGAGAAAGTCAACGCGCC
GATCACGGGCATCGACCCATCCATCCCCGGAGATGTCGTGGGGCTGAAGGGTTACGGCAAGCAGATCGTGCAGGGTGTCG
AACTGAGCGTGACCGGGGCCCTCACCGAAAACTGGAACGTGTTCGGCGGCGCCGCTTTCATGGATAGCAGACGCGAGCAC
AGCGCTTATCTTGACCTCGTTCGCCGCACCGCGAATCCAGGCGATTTCACCGCAAATGCGGGCAACGGTCCGTGGACCTC
GACCAACGGCGACGCGCTGGCTTTCACGCCGCGCGCTACCGCCAATCTGTGGACCACCTATCATGTTCCTGCGACCAACC
TCACGATCGGCGGTGGTATCCGGTATGTGGGCACGTCCTATCTGGGCCGGCCGGACACTGCGAGCCGGATCATACCCAAT
GGCAGGTTCGGCCAATTGCCGGCTTATACCGTGGTCGATTTGATGGCGTCGTATGAACTCCACAAGGATGTCATCGTTCG
GTTCAACATCGATAATGTGGCGGACAACCGGTACGCGATGTCGACCAACTGGTCCGGCGTCCGTGCCCTGCTTGGACCGT
CGCGTAATTACCGCGTGAGCACCAGCTTCAGGTTCTGA

Upstream 100 bases:

>100_bases
TACCTCACGGGTTTAGATGAATTCTATAATAAAGACTTTGTCGTTTCATGTAGAAGCGCACCCATACATAGGAACTGATT
GATTTGGGGGCTCTAGGGTT

Downstream 100 bases:

>100_bases
TGGGCTGGGCCCGACGGATAAATTCCCTGAACACTCCGGCGTCGTCGCGCCGGGGTGTTTTTCTTTGCGCGAGCCAACGA
TCGTGCCGCCCGTTGCGAGA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 785; Mature: 784

Protein sequence:

>785_residues
MTKKLEVQLYSSISHLALSAGLAVSLAAIAQPASAQSSQTSSAIALDTINVQGEGGAPSSGEGAYNVTMASSPRQTAPLL
DTPQTVTVVPQAVIRQTGARNLTEVLRTTPGISFEGGENGFGTSSNTFQMRGFDASGSLFIDNVRSNGSYTRDIFNVDRV
EVFKGAAADNGRGNAGGYINMVTKLPSLQNFTQFDTFSGFSEYGNQPQKRGTVDLNYIVAPNTAVRFNALLEQSGIPGRD
LAENKAWGVAPSVALGLGTDFRTFLAFEHLSRRDRPDWGVPGATVPGLVTYNPATMGVRRNAFYGLRSDFDNVDADRVLG
RFEYDITRRITISNQTVWAQVDRTTRFTQPTGFTAPATAATSTTFYGRRNQTVSNITNMTIDVDTGPFNHKIATGLEFNH
ETSDANRFGSISSTTNPALLANLFDPNPDRAGPAPFNPTENNRASVSTAAAYFYDTIKLSEQWQITGGLRAEHYKVDINS
RTVAGAPTGLGNFNDTRTTLNGKVGLVYKPVRNASIYGSFGVSHLPPGSYLSNEDISRTGDNAFPGLVQGADPVRFHNYE
LGSKVDFFNKRLMVAAALFRTEKVNAPITGIDPSIPGDVVGLKGYGKQIVQGVELSVTGALTENWNVFGGAAFMDSRREH
SAYLDLVRRTANPGDFTANAGNGPWTSTNGDALAFTPRATANLWTTYHVPATNLTIGGGIRYVGTSYLGRPDTASRIIPN
GRFGQLPAYTVVDLMASYELHKDVIVRFNIDNVADNRYAMSTNWSGVRALLGPSRNYRVSTSFRF

Sequences:

>Translated_785_residues
MTKKLEVQLYSSISHLALSAGLAVSLAAIAQPASAQSSQTSSAIALDTINVQGEGGAPSSGEGAYNVTMASSPRQTAPLL
DTPQTVTVVPQAVIRQTGARNLTEVLRTTPGISFEGGENGFGTSSNTFQMRGFDASGSLFIDNVRSNGSYTRDIFNVDRV
EVFKGAAADNGRGNAGGYINMVTKLPSLQNFTQFDTFSGFSEYGNQPQKRGTVDLNYIVAPNTAVRFNALLEQSGIPGRD
LAENKAWGVAPSVALGLGTDFRTFLAFEHLSRRDRPDWGVPGATVPGLVTYNPATMGVRRNAFYGLRSDFDNVDADRVLG
RFEYDITRRITISNQTVWAQVDRTTRFTQPTGFTAPATAATSTTFYGRRNQTVSNITNMTIDVDTGPFNHKIATGLEFNH
ETSDANRFGSISSTTNPALLANLFDPNPDRAGPAPFNPTENNRASVSTAAAYFYDTIKLSEQWQITGGLRAEHYKVDINS
RTVAGAPTGLGNFNDTRTTLNGKVGLVYKPVRNASIYGSFGVSHLPPGSYLSNEDISRTGDNAFPGLVQGADPVRFHNYE
LGSKVDFFNKRLMVAAALFRTEKVNAPITGIDPSIPGDVVGLKGYGKQIVQGVELSVTGALTENWNVFGGAAFMDSRREH
SAYLDLVRRTANPGDFTANAGNGPWTSTNGDALAFTPRATANLWTTYHVPATNLTIGGGIRYVGTSYLGRPDTASRIIPN
GRFGQLPAYTVVDLMASYELHKDVIVRFNIDNVADNRYAMSTNWSGVRALLGPSRNYRVSTSFRF
>Mature_784_residues
TKKLEVQLYSSISHLALSAGLAVSLAAIAQPASAQSSQTSSAIALDTINVQGEGGAPSSGEGAYNVTMASSPRQTAPLLD
TPQTVTVVPQAVIRQTGARNLTEVLRTTPGISFEGGENGFGTSSNTFQMRGFDASGSLFIDNVRSNGSYTRDIFNVDRVE
VFKGAAADNGRGNAGGYINMVTKLPSLQNFTQFDTFSGFSEYGNQPQKRGTVDLNYIVAPNTAVRFNALLEQSGIPGRDL
AENKAWGVAPSVALGLGTDFRTFLAFEHLSRRDRPDWGVPGATVPGLVTYNPATMGVRRNAFYGLRSDFDNVDADRVLGR
FEYDITRRITISNQTVWAQVDRTTRFTQPTGFTAPATAATSTTFYGRRNQTVSNITNMTIDVDTGPFNHKIATGLEFNHE
TSDANRFGSISSTTNPALLANLFDPNPDRAGPAPFNPTENNRASVSTAAAYFYDTIKLSEQWQITGGLRAEHYKVDINSR
TVAGAPTGLGNFNDTRTTLNGKVGLVYKPVRNASIYGSFGVSHLPPGSYLSNEDISRTGDNAFPGLVQGADPVRFHNYEL
GSKVDFFNKRLMVAAALFRTEKVNAPITGIDPSIPGDVVGLKGYGKQIVQGVELSVTGALTENWNVFGGAAFMDSRREHS
AYLDLVRRTANPGDFTANAGNGPWTSTNGDALAFTPRATANLWTTYHVPATNLTIGGGIRYVGTSYLGRPDTASRIIPNG
RFGQLPAYTVVDLMASYELHKDVIVRFNIDNVADNRYAMSTNWSGVRALLGPSRNYRVSTSFRF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=808, Percent_Identity=30.3217821782178, Blast_Score=311, Evalue=1e-85,
Organism=Escherichia coli, GI1787344, Length=238, Percent_Identity=28.1512605042017, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 84644; Mature: 84513

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKLEVQLYSSISHLALSAGLAVSLAAIAQPASAQSSQTSSAIALDTINVQGEGGAPSS
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
GEGAYNVTMASSPRQTAPLLDTPQTVTVVPQAVIRQTGARNLTEVLRTTPGISFEGGENG
CCCEEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHCCCCCEECCCCCC
FGTSSNTFQMRGFDASGSLFIDNVRSNGSYTRDIFNVDRVEVFKGAAADNGRGNAGGYIN
CCCCCCEEEEEEECCCCCEEEEEECCCCCEEHHHHCCCHHHEEECCCCCCCCCCCCCEEE
MVTKLPSLQNFTQFDTFSGFSEYGNQPQKRGTVDLNYIVAPNTAVRFNALLEQSGIPGRD
EEECCCCCCCCHHHHCCCCHHHHCCCCCCCCCEEEEEEECCCCCEEHHHHHHHCCCCCCC
LAENKAWGVAPSVALGLGTDFRTFLAFEHLSRRDRPDWGVPGATVPGLVTYNPATMGVRR
CCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHCCEEC
NAFYGLRSDFDNVDADRVLGRFEYDITRRITISNQTVWAQVDRTTRFTQPTGFTAPATAA
CCCCCCCCCCCCCCHHHHHHHEEEEEEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCC
TSTTFYGRRNQTVSNITNMTIDVDTGPFNHKIATGLEFNHETSDANRFGSISSTTNPALL
CCEEEECCCCCCHHHCEEEEEEECCCCCCCEEECCEECCCCCCCHHHCCCCCCCCCCEEE
ANLFDPNPDRAGPAPFNPTENNRASVSTAAAYFYDTIKLSEQWQITGGLRAEHYKVDINS
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHEEHEEEEEECCEEEEECCCCEEEEEEECCC
RTVAGAPTGLGNFNDTRTTLNGKVGLVYKPVRNASIYGSFGVSHLPPGSYLSNEDISRTG
EEECCCCCCCCCCCCCEEEECCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
DNAFPGLVQGADPVRFHNYELGSKVDFFNKRLMVAAALFRTEKVNAPITGIDPSIPGDVV
CCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
GLKGYGKQIVQGVELSVTGALTENWNVFGGAAFMDSRREHSAYLDLVRRTANPGDFTANA
ECCCCCHHHHCCEEEEEEEEEECCCCEEECHHHHHCCHHHHHHHHHHHHCCCCCCEECCC
GNGPWTSTNGDALAFTPRATANLWTTYHVPATNLTIGGGIRYVGTSYLGRPDTASRIIPN
CCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEECCCEEEECCCCCCCCCCHHHCCCC
GRFGQLPAYTVVDLMASYELHKDVIVRFNIDNVADNRYAMSTNWSGVRALLGPSRNYRVS
CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHCCCCCEEEE
TSFRF
EEECC
>Mature Secondary Structure 
TKKLEVQLYSSISHLALSAGLAVSLAAIAQPASAQSSQTSSAIALDTINVQGEGGAPSS
CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
GEGAYNVTMASSPRQTAPLLDTPQTVTVVPQAVIRQTGARNLTEVLRTTPGISFEGGENG
CCCEEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHCCCCCEECCCCCC
FGTSSNTFQMRGFDASGSLFIDNVRSNGSYTRDIFNVDRVEVFKGAAADNGRGNAGGYIN
CCCCCCEEEEEEECCCCCEEEEEECCCCCEEHHHHCCCHHHEEECCCCCCCCCCCCCEEE
MVTKLPSLQNFTQFDTFSGFSEYGNQPQKRGTVDLNYIVAPNTAVRFNALLEQSGIPGRD
EEECCCCCCCCHHHHCCCCHHHHCCCCCCCCCEEEEEEECCCCCEEHHHHHHHCCCCCCC
LAENKAWGVAPSVALGLGTDFRTFLAFEHLSRRDRPDWGVPGATVPGLVTYNPATMGVRR
CCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHCCEEC
NAFYGLRSDFDNVDADRVLGRFEYDITRRITISNQTVWAQVDRTTRFTQPTGFTAPATAA
CCCCCCCCCCCCCCHHHHHHHEEEEEEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCC
TSTTFYGRRNQTVSNITNMTIDVDTGPFNHKIATGLEFNHETSDANRFGSISSTTNPALL
CCEEEECCCCCCHHHCEEEEEEECCCCCCCEEECCEECCCCCCCHHHCCCCCCCCCCEEE
ANLFDPNPDRAGPAPFNPTENNRASVSTAAAYFYDTIKLSEQWQITGGLRAEHYKVDINS
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHEEHEEEEEECCEEEEECCCCEEEEEEECCC
RTVAGAPTGLGNFNDTRTTLNGKVGLVYKPVRNASIYGSFGVSHLPPGSYLSNEDISRTG
EEECCCCCCCCCCCCCEEEECCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
DNAFPGLVQGADPVRFHNYELGSKVDFFNKRLMVAAALFRTEKVNAPITGIDPSIPGDVV
CCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
GLKGYGKQIVQGVELSVTGALTENWNVFGGAAFMDSRREHSAYLDLVRRTANPGDFTANA
ECCCCCHHHHCCEEEEEEEEEECCCCEEECHHHHHCCHHHHHHHHHHHHCCCCCCEECCC
GNGPWTSTNGDALAFTPRATANLWTTYHVPATNLTIGGGIRYVGTSYLGRPDTASRIIPN
CCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEECCCEEEECCCCCCCCCCHHHCCCC
GRFGQLPAYTVVDLMASYELHKDVIVRFNIDNVADNRYAMSTNWSGVRALLGPSRNYRVS
CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHCCCCCEEEE
TSFRF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]