| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674771
Identifier: 75674771
GI number: 75674771
Start: 647374
End: 649860
Strand: Direct
Name: 75674771
Synonym: Nwi_0573
Alternate gene names: NA
Gene position: 647374-649860 (Clockwise)
Preceding gene: 75674770
Following gene: 75674774
Centisome position: 19.03
GC content: 67.59
Gene sequence:
>2487_bases TTGAGCGGCGTTACCCCCGATCCATCCCGTCAGGATGACGATCCGCGTGCGTTGGCGGGAGTTGAACTGACGCGCGCCCT GCGGCGCGCCAGGTGGGTGATCGCGTGGGAAAGGGGCTGGCCGCATCTTGCGCGGCTGCTTTGCGTCGGCGGGCTGTTTC TGGCGATTTCCTGGGCCGGGGCCTGGCTGGTTCTGCCGGCTTGGGTGCGCGCCGTTGCTCTTGCCGCATTTGTTCTGCTC GCCGTCGCGGCGGCGGTGCCTGCCGTCAGGTTCCGCTGGCCCAGCCGCGAGGACGGATTGAACCGGCTCGACCGCGGCGC CGGCCTTCGCCATCGTCCCGTCACCGCGCTCGCCGACACGCTGGCGACCCGGGATCCGGTTGCGCAGGCTTTGTGGCAGG CGCAGCGCGCCCGCACGCTGACCGCGATCAAGCGTCTTCGCGCGGGGCTGCCGTCGCCGCGGCTGCCGCTGCATGACCGC TGGGCCCTGCGAGCGCTGGTGATGGTGCTGATGGTCGCCACTTTCATCGCGGCGGGCGGCGAGCGGACCGAGCGTGTCGC TGCGGCGTTCGACAGGAATGGCGCGCTGACCTCGGCTCATGTCAGGGTCGATGCCTGGGTGGCTCCGCCGCCTTATACCG GCAAGCCGCCCATCATCCTGTCGGCGACCGGCAAGGACGCCAATCCGTCCGATACCGCGCTTCCAGTGCCTGCGGGCAGC ACGCTGATCGTGCGTTCGAGCGGCGGCAGTCTCGACGTCGCGCTCAGCGGCGGTGTGACCGAGAAGGCTGTCGCCGACAA GCCCGCGGAAGGCGCGAGCGAGCGGCATTTCATCATTGCCGCGGATGGCGCGGCTCAGGTGCGTGCGCCGTTGGGGCAGC CGCGATGGACTTTCAGCGCGATTGCCGATCGCGCCCCGGCCATTTCGCTGGCCAAGCGGCCGGAACGCCAGGCGCGCGGA TCGTTGCAGATGTCCTACCGCCTGGAGGACGATTACGGCGTGACCGAAGCCCATGCGGCATTCTCGGCCCGGCCCGCATC CGCTGTAAACGATGGGACGGCCGCGCGCCCGCTGTTCGATCCGCCGCAATTCGCGCTGGTGCTGCCGAACGCCAGGCCCC GTAGCGGCATCGGGCAGACGGTTCAGGATCTGAGCGAAAGTCCCTACGCGGGCGCCGAAGTGACCTTGACGCTGACGGCG CGCGATGACGCCGGAAACGAGGGTCGCAGCGAACCGCTCGACCTGCGCCTGCCGGAACGCGTGTTCACCAAACCGCTTGC GCGCGCGCTGATCGAGCAGCGTCGCATCCTGGCGCTGGACGCCAATCAGAACAGGCAGGTCCATACCGCGCTCGGTGCTC TGCTGATCGCGCCCGAGGTGTTTACTCCCAGGGCGGGCGAGTATCTCGGTCTTTACAGCGTCACGAAGCAGCTTGAGGAA GCGCGCATCGACGCCCAGTTGCGAGAAGTCGTCGCCAGTCTCTGGGGGCTCGCCGTCAGCATCGAGGACGGCAACATCAC CGATGTGGAGAAGGCGCTGCGTGCCGCGCAGGATGCCTTGAAGGAGGCCTTGGAGCGCCGCGCGAGCGATGAGGAGATCA GGAAGCTCACCGAGAACCTGCGCGCGGCGCTGGATAATTACCTGCGCCAGTTGGCCGAACAGATGCGCAACAATCCGGAG CAACTGGCGCGTCCGCTCGACCCCAACGGTAAGGTGATGCGTCCGCAGGATCTCGACAACATGATCGAGCGCATGGAGCG TCTGTCCCGCTCCGGCGACAAGGAAGCCGCCAGGCAATTGCTCGATCAATTGCAGCAGATGCTTGAGAATTTGCAGATGG CGCAGCCGGGCCAGGGCGAGGGAGCGGGCGAGGACCTGCAACAGTCGCTGAATGAACTCGGCGACATGATCCGCAAGCAG CAGCAGTTGCGCGACAAAACCTACAAGCAAGGCATGGATTCGCGGCGCGATGACGATGACGGCCAAGAGCGCGGCGGTCA GAATGGCATGGGCGGCCTGCAGCAGGATCAAAAGGCCCTGCATGACAGGCTCAAGACATTGCAGCAGGAACTCGCCCGGC GCGGCATGGGATCGAGCCAGCCGGACGACGATCTCGGCCAGGCCGATTCGGCAATGGGCCAGGCGGGCGGCCGGCTTGGC GAGGGTAACGCCGATGGCGCGGTCGACGCGCAGGGCCGGGCGCTCGACGCGCTGCGCAAGGGCGCCCGGAGCCTCGCCGA AGCCATGCAGCAGGGCGAAGACGGGTCGGGTGGTCGTGCGGGCCGGCAGAGCGGCGGTCAGACCGACCCGCTGGGGCGGC CGTTGCGGGGTCGCGAGTTCGGCAACGAGACGACAGTCAGGATTCCCGGCGAGATCGATGTTCAGCGGGTCCGCCGCATT CTCGAAGAGTTGCGCCGCCGCCTCGCCGATCCGTCACGGCCGAAGATCGAACTCGATTACATCGATCGGCTGCTCAAGGA CTACTGA
Upstream 100 bases:
>100_bases CGGTTCGCGTGAAGAAAACGCGTCCAACAACAATCTGGAGCTTCGCTTCTGATTCAATCGGGAGCGGGGTTGTTCTAGCT TCAGCAGCGCGGAGAACGAG
Downstream 100 bases:
>100_bases TCGTTCCGCCGGTCTGCGTCGTCAGCGCGCCCGCGACCGCGGCGCGGATATCGGCCACCGAAAACGGCTTGGTGACGACA TCATGCACGATGGCGTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 828; Mature: 827
Protein sequence:
>828_residues MSGVTPDPSRQDDDPRALAGVELTRALRRARWVIAWERGWPHLARLLCVGGLFLAISWAGAWLVLPAWVRAVALAAFVLL AVAAAVPAVRFRWPSREDGLNRLDRGAGLRHRPVTALADTLATRDPVAQALWQAQRARTLTAIKRLRAGLPSPRLPLHDR WALRALVMVLMVATFIAAGGERTERVAAAFDRNGALTSAHVRVDAWVAPPPYTGKPPIILSATGKDANPSDTALPVPAGS TLIVRSSGGSLDVALSGGVTEKAVADKPAEGASERHFIIAADGAAQVRAPLGQPRWTFSAIADRAPAISLAKRPERQARG SLQMSYRLEDDYGVTEAHAAFSARPASAVNDGTAARPLFDPPQFALVLPNARPRSGIGQTVQDLSESPYAGAEVTLTLTA RDDAGNEGRSEPLDLRLPERVFTKPLARALIEQRRILALDANQNRQVHTALGALLIAPEVFTPRAGEYLGLYSVTKQLEE ARIDAQLREVVASLWGLAVSIEDGNITDVEKALRAAQDALKEALERRASDEEIRKLTENLRAALDNYLRQLAEQMRNNPE QLARPLDPNGKVMRPQDLDNMIERMERLSRSGDKEAARQLLDQLQQMLENLQMAQPGQGEGAGEDLQQSLNELGDMIRKQ QQLRDKTYKQGMDSRRDDDDGQERGGQNGMGGLQQDQKALHDRLKTLQQELARRGMGSSQPDDDLGQADSAMGQAGGRLG EGNADGAVDAQGRALDALRKGARSLAEAMQQGEDGSGGRAGRQSGGQTDPLGRPLRGREFGNETTVRIPGEIDVQRVRRI LEELRRRLADPSRPKIELDYIDRLLKDY
Sequences:
>Translated_828_residues MSGVTPDPSRQDDDPRALAGVELTRALRRARWVIAWERGWPHLARLLCVGGLFLAISWAGAWLVLPAWVRAVALAAFVLL AVAAAVPAVRFRWPSREDGLNRLDRGAGLRHRPVTALADTLATRDPVAQALWQAQRARTLTAIKRLRAGLPSPRLPLHDR WALRALVMVLMVATFIAAGGERTERVAAAFDRNGALTSAHVRVDAWVAPPPYTGKPPIILSATGKDANPSDTALPVPAGS TLIVRSSGGSLDVALSGGVTEKAVADKPAEGASERHFIIAADGAAQVRAPLGQPRWTFSAIADRAPAISLAKRPERQARG SLQMSYRLEDDYGVTEAHAAFSARPASAVNDGTAARPLFDPPQFALVLPNARPRSGIGQTVQDLSESPYAGAEVTLTLTA RDDAGNEGRSEPLDLRLPERVFTKPLARALIEQRRILALDANQNRQVHTALGALLIAPEVFTPRAGEYLGLYSVTKQLEE ARIDAQLREVVASLWGLAVSIEDGNITDVEKALRAAQDALKEALERRASDEEIRKLTENLRAALDNYLRQLAEQMRNNPE QLARPLDPNGKVMRPQDLDNMIERMERLSRSGDKEAARQLLDQLQQMLENLQMAQPGQGEGAGEDLQQSLNELGDMIRKQ QQLRDKTYKQGMDSRRDDDDGQERGGQNGMGGLQQDQKALHDRLKTLQQELARRGMGSSQPDDDLGQADSAMGQAGGRLG EGNADGAVDAQGRALDALRKGARSLAEAMQQGEDGSGGRAGRQSGGQTDPLGRPLRGREFGNETTVRIPGEIDVQRVRRI LEELRRRLADPSRPKIELDYIDRLLKDY >Mature_827_residues SGVTPDPSRQDDDPRALAGVELTRALRRARWVIAWERGWPHLARLLCVGGLFLAISWAGAWLVLPAWVRAVALAAFVLLA VAAAVPAVRFRWPSREDGLNRLDRGAGLRHRPVTALADTLATRDPVAQALWQAQRARTLTAIKRLRAGLPSPRLPLHDRW ALRALVMVLMVATFIAAGGERTERVAAAFDRNGALTSAHVRVDAWVAPPPYTGKPPIILSATGKDANPSDTALPVPAGST LIVRSSGGSLDVALSGGVTEKAVADKPAEGASERHFIIAADGAAQVRAPLGQPRWTFSAIADRAPAISLAKRPERQARGS LQMSYRLEDDYGVTEAHAAFSARPASAVNDGTAARPLFDPPQFALVLPNARPRSGIGQTVQDLSESPYAGAEVTLTLTAR DDAGNEGRSEPLDLRLPERVFTKPLARALIEQRRILALDANQNRQVHTALGALLIAPEVFTPRAGEYLGLYSVTKQLEEA RIDAQLREVVASLWGLAVSIEDGNITDVEKALRAAQDALKEALERRASDEEIRKLTENLRAALDNYLRQLAEQMRNNPEQ LARPLDPNGKVMRPQDLDNMIERMERLSRSGDKEAARQLLDQLQQMLENLQMAQPGQGEGAGEDLQQSLNELGDMIRKQQ QLRDKTYKQGMDSRRDDDDGQERGGQNGMGGLQQDQKALHDRLKTLQQELARRGMGSSQPDDDLGQADSAMGQAGGRLGE GNADGAVDAQGRALDALRKGARSLAEAMQQGEDGSGGRAGRQSGGQTDPLGRPLRGREFGNETTVRIPGEIDVQRVRRIL EELRRRLADPSRPKIELDYIDRLLKDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90179; Mature: 90048
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVTPDPSRQDDDPRALAGVELTRALRRARWVIAWERGWPHLARLLCVGGLFLAISWAG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHH AWLVLPAWVRAVALAAFVLLAVAAAVPAVRFRWPSREDGLNRLDRGAGLRHRPVTALADT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHCCCCCCCCHHHHHHH LATRDPVAQALWQAQRARTLTAIKRLRAGLPSPRLPLHDRWALRALVMVLMVATFIAAGG HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ERTERVAAAFDRNGALTSAHVRVDAWVAPPPYTGKPPIILSATGKDANPSDTALPVPAGS CHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCCCC TLIVRSSGGSLDVALSGGVTEKAVADKPAEGASERHFIIAADGAAQVRAPLGQPRWTFSA EEEEECCCCCEEEEECCCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCHHHH IADRAPAISLAKRPERQARGSLQMSYRLEDDYGVTEAHAAFSARPASAVNDGTAARPLFD HHCCCCHHHHHHCCCHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC PPQFALVLPNARPRSGIGQTVQDLSESPYAGAEVTLTLTARDDAGNEGRSEPLDLRLPER CCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHH VFTKPLARALIEQRRILALDANQNRQVHTALGALLIAPEVFTPRAGEYLGLYSVTKQLEE HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ARIDAQLREVVASLWGLAVSIEDGNITDVEKALRAAQDALKEALERRASDEEIRKLTENL HHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RAALDNYLRQLAEQMRNNPEQLARPLDPNGKVMRPQDLDNMIERMERLSRSGDKEAARQL HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHH LDQLQQMLENLQMAQPGQGEGAGEDLQQSLNELGDMIRKQQQLRDKTYKQGMDSRRDDDD HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GQERGGQNGMGGLQQDQKALHDRLKTLQQELARRGMGSSQPDDDLGQADSAMGQAGGRLG HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC EGNADGAVDAQGRALDALRKGARSLAEAMQQGEDGSGGRAGRQSGGQTDPLGRPLRGREF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNETTVRIPGEIDVQRVRRILEELRRRLADPSRPKIELDYIDRLLKDY CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCC >Mature Secondary Structure SGVTPDPSRQDDDPRALAGVELTRALRRARWVIAWERGWPHLARLLCVGGLFLAISWAG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHH AWLVLPAWVRAVALAAFVLLAVAAAVPAVRFRWPSREDGLNRLDRGAGLRHRPVTALADT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHCCCCCCCCHHHHHHH LATRDPVAQALWQAQRARTLTAIKRLRAGLPSPRLPLHDRWALRALVMVLMVATFIAAGG HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ERTERVAAAFDRNGALTSAHVRVDAWVAPPPYTGKPPIILSATGKDANPSDTALPVPAGS CHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCCCC TLIVRSSGGSLDVALSGGVTEKAVADKPAEGASERHFIIAADGAAQVRAPLGQPRWTFSA EEEEECCCCCEEEEECCCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCHHHH IADRAPAISLAKRPERQARGSLQMSYRLEDDYGVTEAHAAFSARPASAVNDGTAARPLFD HHCCCCHHHHHHCCCHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC PPQFALVLPNARPRSGIGQTVQDLSESPYAGAEVTLTLTARDDAGNEGRSEPLDLRLPER CCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHH VFTKPLARALIEQRRILALDANQNRQVHTALGALLIAPEVFTPRAGEYLGLYSVTKQLEE HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ARIDAQLREVVASLWGLAVSIEDGNITDVEKALRAAQDALKEALERRASDEEIRKLTENL HHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RAALDNYLRQLAEQMRNNPEQLARPLDPNGKVMRPQDLDNMIERMERLSRSGDKEAARQL HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHH LDQLQQMLENLQMAQPGQGEGAGEDLQQSLNELGDMIRKQQQLRDKTYKQGMDSRRDDDD HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GQERGGQNGMGGLQQDQKALHDRLKTLQQELARRGMGSSQPDDDLGQADSAMGQAGGRLG HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC EGNADGAVDAQGRALDALRKGARSLAEAMQQGEDGSGGRAGRQSGGQTDPLGRPLRGREF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNETTVRIPGEIDVQRVRRILEELRRRLADPSRPKIELDYIDRLLKDY CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA