Click here to switch to the map view.

The map label for this gene is 75674679

Identifier: 75674679

GI number: 75674679

Start: 537860

End: 538810

Strand: Direct

Name: 75674679

Synonym: Nwi_0481

Alternate gene names: NA

Gene position: 537860-538810 (Clockwise)

Preceding gene: 75674678

Following gene: 75674680

Centisome position: 15.81

GC content: 58.68

Gene sequence:

>951_bases
ATGGGACAGGTTCTTCACGGGAGCGCCACGACGACAGAGGCAATCCGTCGAGCAATACAAAATAGTGAAGAGAGCCTGAG
AGCGCTGTCGAAACGCTACGGGATCAACCAGAAGACCGTCGCAAAATGGAAGAAGCGGACCTCGGTGGCCGACCTTCCGA
CGGGACCGAAAGATCCGCGCTCGACGGTGCTCTCATCCGAGGAGGAGGCGATCATCGTCGCCTTCCGCAAGCATACCCTG
TTGCCGCTCGATGATTGCCTCTACGCGCTTCAGCCAACGATCCCGCACCTGTCGCGGTCTTCATTGCATCGCTGCCTGCA
CCGTCACGGCATCAGCCGGCTCCCGGAGGTCGAAGGCGACAAGCCGATCAGGAAGACGTTCAGGAGCTACCCGATCGGCT
ACTTCCACATCGACATCGCCGAGGTGCAGACGGCTGAGGGCAAGCTGCGCCTGTTCGTGGCCATCGACCGCACTTCGAAG
TTCGCCTACGCCGAGCTCCACCAAGAGGCGGGCAAGATGGTCGCGGCTCAGTTCCTGCGCAACCTCATCGTGGCAGTTCC
CTATGCCATCCACACGGTGCTGACGGACAACGGCATCCAGTTCACCAACCACGCCCGTCACAAATATGCGTTCCACCACA
TCTTCGATCGCGTCTGCGACGAGAACGGCATCGAGCACAGGCTCACCAGGATCAACCATCCCTGGACCAACGGACAGGTG
GAACGGATGAACCGCACCATCAAGGACGCCACCGTCAAGCGCTTCCACTACGACAATCATGACCAACTGCGCCGGCACCT
TCAGGACTTCATCAAGGCATACAACTTCGGTCGAAGGCTGAAGACGCTCAAAGGCCTCACACCCTACGAGTTCATCTGCA
AACGATGGACTTCAGAGCCCGATCGATTCATCATCGATCCAATCCATCAAATGCCGGGACTGAACACCTAG

Upstream 100 bases:

>100_bases
GATTCCAGCAGAAGCGAGTTCCTTCAGAAGCGAAAGGCTCTAGATGTTTGATCCCGGCATTTGATGGTGCATTATTTTCC
GGAGAATGGAAGGATGCGCT

Downstream 100 bases:

>100_bases
AGCATGATCCGATCAAGCTGAATCGGACCATGCTCTAGAAATTATTGTCTGGTCGCATTTTCTTGCGGCGAACAGGTCAT
CCACCTCGCCGGAAAACGCT

Product: integrase, catalytic region

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Transposase For ISMyma; ISmav2-Like Transposase; Hypothethical Protein Transposase; Instegrase; Insertion Sequence Transposase Protein; Noncomposite Transposon Transposase; Transposase Of; LOW QUALITY PROTEIN Transposase

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MGQVLHGSATTTEAIRRAIQNSEESLRALSKRYGINQKTVAKWKKRTSVADLPTGPKDPRSTVLSSEEEAIIVAFRKHTL
LPLDDCLYALQPTIPHLSRSSLHRCLHRHGISRLPEVEGDKPIRKTFRSYPIGYFHIDIAEVQTAEGKLRLFVAIDRTSK
FAYAELHQEAGKMVAAQFLRNLIVAVPYAIHTVLTDNGIQFTNHARHKYAFHHIFDRVCDENGIEHRLTRINHPWTNGQV
ERMNRTIKDATVKRFHYDNHDQLRRHLQDFIKAYNFGRRLKTLKGLTPYEFICKRWTSEPDRFIIDPIHQMPGLNT

Sequences:

>Translated_316_residues
MGQVLHGSATTTEAIRRAIQNSEESLRALSKRYGINQKTVAKWKKRTSVADLPTGPKDPRSTVLSSEEEAIIVAFRKHTL
LPLDDCLYALQPTIPHLSRSSLHRCLHRHGISRLPEVEGDKPIRKTFRSYPIGYFHIDIAEVQTAEGKLRLFVAIDRTSK
FAYAELHQEAGKMVAAQFLRNLIVAVPYAIHTVLTDNGIQFTNHARHKYAFHHIFDRVCDENGIEHRLTRINHPWTNGQV
ERMNRTIKDATVKRFHYDNHDQLRRHLQDFIKAYNFGRRLKTLKGLTPYEFICKRWTSEPDRFIIDPIHQMPGLNT
>Mature_315_residues
GQVLHGSATTTEAIRRAIQNSEESLRALSKRYGINQKTVAKWKKRTSVADLPTGPKDPRSTVLSSEEEAIIVAFRKHTLL
PLDDCLYALQPTIPHLSRSSLHRCLHRHGISRLPEVEGDKPIRKTFRSYPIGYFHIDIAEVQTAEGKLRLFVAIDRTSKF
AYAELHQEAGKMVAAQFLRNLIVAVPYAIHTVLTDNGIQFTNHARHKYAFHHIFDRVCDENGIEHRLTRINHPWTNGQVE
RMNRTIKDATVKRFHYDNHDQLRRHLQDFIKAYNFGRRLKTLKGLTPYEFICKRWTSEPDRFIIDPIHQMPGLNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36557; Mature: 36426

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVLHGSATTTEAIRRAIQNSEESLRALSKRYGINQKTVAKWKKRTSVADLPTGPKDPR
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHH
STVLSSEEEAIIVAFRKHTLLPLDDCLYALQPTIPHLSRSSLHRCLHRHGISRLPEVEGD
HHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHCCCCCCCC
KPIRKTFRSYPIGYFHIDIAEVQTAEGKLRLFVAIDRTSKFAYAELHQEAGKMVAAQFLR
CHHHHHHHHCCCEEEEEEHHHHEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
NLIVAVPYAIHTVLTDNGIQFTNHARHKYAFHHIFDRVCDENGIEHRLTRINHPWTNGQV
HHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHH
ERMNRTIKDATVKRFHYDNHDQLRRHLQDFIKAYNFGRRLKTLKGLTPYEFICKRWTSEP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DRFIIDPIHQMPGLNT
CCEEECCHHHCCCCCC
>Mature Secondary Structure 
GQVLHGSATTTEAIRRAIQNSEESLRALSKRYGINQKTVAKWKKRTSVADLPTGPKDPR
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHH
STVLSSEEEAIIVAFRKHTLLPLDDCLYALQPTIPHLSRSSLHRCLHRHGISRLPEVEGD
HHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHCCCCCCCC
KPIRKTFRSYPIGYFHIDIAEVQTAEGKLRLFVAIDRTSKFAYAELHQEAGKMVAAQFLR
CHHHHHHHHCCCEEEEEEHHHHEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
NLIVAVPYAIHTVLTDNGIQFTNHARHKYAFHHIFDRVCDENGIEHRLTRINHPWTNGQV
HHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHH
ERMNRTIKDATVKRFHYDNHDQLRRHLQDFIKAYNFGRRLKTLKGLTPYEFICKRWTSEP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DRFIIDPIHQMPGLNT
CCEEECCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA